RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 TRPM1Q7Z4N2 1603 aa11.41□□□□□ -0.58
LINC00958-207ENST00000534477 CRB1P82279 1406 aa11.41□□□□□ -0.58
LINC00958-207ENST00000534477 DDB1Q16531 1140 aa11.4□□□□□ -0.58
LINC00958-207ENST00000534477 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
LINC00958-207ENST00000534477 TRPC6Q9Y210 931 aa11.4□□□□□ -0.58
LINC00958-207ENST00000534477 THRAP3Q9Y2W1 955 aaKnown RBP11.4□□□□□ -0.58
LINC00958-207ENST00000534477 DISP2A7MBM2 1401 aa11.4□□□□□ -0.58
LINC00958-207ENST00000534477 PIK3C2AO00443 1686 aa11.4□□□□□ -0.59
LINC00958-207ENST00000534477 NBR1Q14596 966 aa11.39□□□□□ -0.59
LINC00958-207ENST00000534477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00958-207ENST00000534477 TTC21BQ7Z4L5 1316 aa11.38□□□□□ -0.59
LINC00958-207ENST00000534477 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
LINC00958-207ENST00000534477 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
LINC00958-207ENST00000534477 PPP1R1BQ9UD71 204 aaPredicted RBP11.38□□□□□ -0.59
LINC00958-207ENST00000534477 SLIT3O75094 1523 aa11.38□□□□□ -0.59
LINC00958-207ENST00000534477 AATKQ6ZMQ8 1374 aa11.38□□□□□ -0.59
LINC00958-207ENST00000534477 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
LINC00958-207ENST00000534477 PARP4Q9UKK3 1724 aaKnown RBP11.38□□□□□ -0.59
LINC00958-207ENST00000534477 OVOS2A0A0G2JMS6 1433 aa11.37□□□□□ -0.59
LINC00958-207ENST00000534477 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
LINC00958-207ENST00000534477 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
LINC00958-207ENST00000534477 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
LINC00958-207ENST00000534477 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
LINC00958-207ENST00000534477 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
LINC00958-207ENST00000534477 BRD4O60885 1362 aaPredicted RBP11.37□□□□□ -0.59
LINC00958-207ENST00000534477 KTN1Q86UP2 1357 aaKnown RBP11.37□□□□□ -0.59
LINC00958-207ENST00000534477 PARD3Q8TEW0 1356 aa11.37□□□□□ -0.59
LINC00958-207ENST00000534477 RREB1Q92766 1687 aa11.36□□□□□ -0.59
LINC00958-207ENST00000534477 CPSF1Q10570 1443 aaKnown RBP11.36□□□□□ -0.59
LINC00958-207ENST00000534477 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
LINC00958-207ENST00000534477 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
LINC00958-207ENST00000534477 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
LINC00958-207ENST00000534477 TTLL13PA6NNM8 815 aa11.35□□□□□ -0.59
LINC00958-207ENST00000534477 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
LINC00958-207ENST00000534477 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
LINC00958-207ENST00000534477 PPP1R37O75864 691 aa11.34□□□□□ -0.59
LINC00958-207ENST00000534477 ARHGEF25Q86VW2 580 aa11.34□□□□□ -0.59
LINC00958-207ENST00000534477 NME9Q86XW9 330 aa11.34□□□□□ -0.59
LINC00958-207ENST00000534477 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
LINC00958-207ENST00000534477 WNK3Q9BYP7 1800 aa11.34□□□□□ -0.59
LINC00958-207ENST00000534477 TTC21AQ8NDW8 1320 aa11.34□□□□□ -0.59
LINC00958-207ENST00000534477 COL18A1P39060 1754 aa11.33□□□□□ -0.59
LINC00958-207ENST00000534477 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
LINC00958-207ENST00000534477 MARCH10Q8NA82 808 aaPredicted RBP11.33□□□□□ -0.6
LINC00958-207ENST00000534477 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
LINC00958-207ENST00000534477 NLRP2Q9NX02 1062 aa11.33□□□□□ -0.6
LINC00958-207ENST00000534477 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
LINC00958-207ENST00000534477 C11orf95C9JLR9 678 aaPredicted RBP11.32□□□□□ -0.6
LINC00958-207ENST00000534477 EXOC5O00471 708 aa11.32□□□□□ -0.6
LINC00958-207ENST00000534477 HDGFL2Q7Z4V5 671 aaPredicted RBP11.32□□□□□ -0.6
LINC00958-207ENST00000534477 ACSBG1Q96GR2 724 aa11.32□□□□□ -0.6
LINC00958-207ENST00000534477 SPON1Q9HCB6 807 aa11.32□□□□□ -0.6
LINC00958-207ENST00000534477 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
LINC00958-207ENST00000534477 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
LINC00958-207ENST00000534477 LTV1Q96GA3 475 aaPredicted RBP11.31□□□□□ -0.6
LINC00958-207ENST00000534477 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
LINC00958-207ENST00000534477 CARD10Q9BWT7 1032 aa11.31□□□□□ -0.6
LINC00958-207ENST00000534477 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
LINC00958-207ENST00000534477 MON2Q7Z3U7 1717 aa11.31□□□□□ -0.6
LINC00958-207ENST00000534477 KCNQ2O43526 872 aa11.3□□□□□ -0.6
LINC00958-207ENST00000534477 ZBTB7AO95365 584 aa11.3□□□□□ -0.6
LINC00958-207ENST00000534477 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
LINC00958-207ENST00000534477 SLC12A5Q9H2X9 1139 aa11.3□□□□□ -0.6
LINC00958-207ENST00000534477 NFAT5O94916 1531 aa11.3□□□□□ -0.6
LINC00958-207ENST00000534477 KAT6BQ8WYB5 2073 aa11.29□□□□□ -0.6
LINC00958-207ENST00000534477 LTN1O94822 1766 aa11.29□□□□□ -0.6
LINC00958-207ENST00000534477 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
LINC00958-207ENST00000534477 CCDC7Q96M83 1385 aa11.28□□□□□ -0.6
LINC00958-207ENST00000534477 ANKRD24Q8TF21 1146 aa11.28□□□□□ -0.6
LINC00958-207ENST00000534477 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
LINC00958-207ENST00000534477 TRIM35Q9UPQ4 493 aa11.28□□□□□ -0.6
LINC00958-207ENST00000534477 PLSCR1O15162 318 aa11.27□□□□□ -0.61
LINC00958-207ENST00000534477 YY1P25490 414 aa11.27□□□□□ -0.61
LINC00958-207ENST00000534477 TXNRD1Q16881 649 aa11.27□□□□□ -0.61
LINC00958-207ENST00000534477 TERF2IPQ9NYB0 399 aa11.27□□□□□ -0.61
LINC00958-207ENST00000534477 SBNO2Q9Y2G9 1366 aa11.27□□□□□ -0.61
LINC00958-207ENST00000534477 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
LINC00958-207ENST00000534477 IL2RBP14784 551 aa11.26□□□□□ -0.61
LINC00958-207ENST00000534477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00958-207ENST00000534477 ERBB3P21860 1342 aa11.26□□□□□ -0.61
LINC00958-207ENST00000534477 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
LINC00958-207ENST00000534477 RGPD3A6NKT7 1758 aaPredicted RBP11.26□□□□□ -0.61
LINC00958-207ENST00000534477 RGPD4Q7Z3J3 1758 aa11.26□□□□□ -0.61
LINC00958-207ENST00000534477 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
LINC00958-207ENST00000534477 DDX54Q8TDD1 881 aaKnown RBP11.25□□□□□ -0.61
LINC00958-207ENST00000534477 SYTL4Q96C24 671 aaPredicted RBP11.25□□□□□ -0.61
LINC00958-207ENST00000534477 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
LINC00958-207ENST00000534477 EDC4Q6P2E9 1401 aaKnown RBP11.25□□□□□ -0.61
LINC00958-207ENST00000534477 FBLN1P23142 703 aa11.24□□□□□ -0.61
LINC00958-207ENST00000534477 USP31Q70CQ4 1352 aa11.24□□□□□ -0.61
LINC00958-207ENST00000534477 ST20-MTHFSA0A0A6YYL1 179 aa11.23□□□□□ -0.61
LINC00958-207ENST00000534477 AMPHP49418 695 aa11.23□□□□□ -0.61
LINC00958-207ENST00000534477 SLC15A2Q16348 729 aa11.23□□□□□ -0.61
LINC00958-207ENST00000534477 COG3Q96JB2 828 aa11.23□□□□□ -0.61
LINC00958-207ENST00000534477 NINLQ9Y2I6 1382 aa11.23□□□□□ -0.61
LINC00958-207ENST00000534477 MYOM1P52179 1685 aa11.23□□□□□ -0.61
LINC00958-207ENST00000534477 NHSQ6T4R5 1651 aa11.23□□□□□ -0.61
LINC00958-207ENST00000534477 CASZ1Q86V15 1759 aa11.23□□□□□ -0.61
LINC00958-207ENST00000534477 ABCC6O95255 1503 aa11.22□□□□□ -0.61
LINC00958-207ENST00000534477 BTAF1O14981 1849 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms