RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 USHBP1Q8N6Y0 703 aa13.25□□□□□ -0.29
RPS3-219ENST00000534440 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
RPS3-219ENST00000534440 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
RPS3-219ENST00000534440 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
RPS3-219ENST00000534440 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
RPS3-219ENST00000534440 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
RPS3-219ENST00000534440 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
RPS3-219ENST00000534440 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
RPS3-219ENST00000534440 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
RPS3-219ENST00000534440 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
RPS3-219ENST00000534440 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
RPS3-219ENST00000534440 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
RPS3-219ENST00000534440 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
RPS3-219ENST00000534440 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
RPS3-219ENST00000534440 CCDC27Q2M243 656 aa13.22□□□□□ -0.29
RPS3-219ENST00000534440 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
RPS3-219ENST00000534440 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
RPS3-219ENST00000534440 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
RPS3-219ENST00000534440 ZBTB22O15209 634 aa13.21□□□□□ -0.29
RPS3-219ENST00000534440 PRDM11Q9NQV5 511 aa13.21□□□□□ -0.29
RPS3-219ENST00000534440 COL14A1Q05707 1796 aaKnown RBP13.21□□□□□ -0.29
RPS3-219ENST00000534440 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.3
RPS3-219ENST00000534440 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
RPS3-219ENST00000534440 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
RPS3-219ENST00000534440 DUSP27Q5VZP5 1158 aa13.2□□□□□ -0.3
RPS3-219ENST00000534440 BTG4Q9NY30 223 aa13.2□□□□□ -0.3
RPS3-219ENST00000534440 LRRC37A3O60309 1634 aa13.2□□□□□ -0.3
RPS3-219ENST00000534440 MEGF6O75095 1541 aa13.19□□□□□ -0.3
RPS3-219ENST00000534440 DCAF8L1A6NGE4 600 aa13.19□□□□□ -0.3
RPS3-219ENST00000534440 RIPK4P57078 832 aa13.19□□□□□ -0.3
RPS3-219ENST00000534440 SF3B2Q13435 895 aaKnown RBP13.19□□□□□ -0.3
RPS3-219ENST00000534440 FAM98CQ17RN3 349 aaKnown RBP13.19□□□□□ -0.3
RPS3-219ENST00000534440 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
RPS3-219ENST00000534440 CCDC9Q9Y3X0 531 aaKnown RBP13.19□□□□□ -0.3
RPS3-219ENST00000534440 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
RPS3-219ENST00000534440 SPATA31A5Q5VU36 1347 aa13.18□□□□□ -0.3
RPS3-219ENST00000534440 SPATA31A7Q8IWB4 1347 aa13.18□□□□□ -0.3
RPS3-219ENST00000534440 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
RPS3-219ENST00000534440 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
RPS3-219ENST00000534440 NEFMP07197 916 aa13.17□□□□□ -0.3
RPS3-219ENST00000534440 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
RPS3-219ENST00000534440 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
RPS3-219ENST00000534440 E9PSI1 815 aa13.16□□□□□ -0.3
RPS3-219ENST00000534440 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
RPS3-219ENST00000534440 BAG6P46379 1132 aa13.15□□□□□ -0.3
RPS3-219ENST00000534440 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
RPS3-219ENST00000534440 NLRP2Q9NX02 1062 aa13.15□□□□□ -0.3
RPS3-219ENST00000534440 NWD2Q9ULI1 1742 aa13.15□□□□□ -0.3
RPS3-219ENST00000534440 DISP2A7MBM2 1401 aa13.14□□□□□ -0.31
RPS3-219ENST00000534440 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
RPS3-219ENST00000534440 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
RPS3-219ENST00000534440 FAM182BQ5T319 152 aa13.14□□□□□ -0.31
RPS3-219ENST00000534440 MAP3K5Q99683 1374 aa13.14□□□□□ -0.31
RPS3-219ENST00000534440 IL16Q14005 1332 aa13.13□□□□□ -0.31
RPS3-219ENST00000534440 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
RPS3-219ENST00000534440 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
RPS3-219ENST00000534440 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
RPS3-219ENST00000534440 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
RPS3-219ENST00000534440 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
RPS3-219ENST00000534440 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
RPS3-219ENST00000534440 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
RPS3-219ENST00000534440 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
RPS3-219ENST00000534440 CRB1P82279 1406 aa13.13□□□□□ -0.31
RPS3-219ENST00000534440 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
RPS3-219ENST00000534440 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
RPS3-219ENST00000534440 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
RPS3-219ENST00000534440 A0A0G2JS52 829 aa13.12□□□□□ -0.31
RPS3-219ENST00000534440 MYT1Q01538 1121 aa13.12□□□□□ -0.31
RPS3-219ENST00000534440 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
RPS3-219ENST00000534440 MCM10Q7L590 875 aa13.12□□□□□ -0.31
RPS3-219ENST00000534440 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
RPS3-219ENST00000534440 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
RPS3-219ENST00000534440 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
RPS3-219ENST00000534440 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
RPS3-219ENST00000534440 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
RPS3-219ENST00000534440 RNF123Q5XPI4 1314 aa13.11□□□□□ -0.31
RPS3-219ENST00000534440 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
RPS3-219ENST00000534440 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
RPS3-219ENST00000534440 RCAN3Q9UKA8 241 aa13.1□□□□□ -0.31
RPS3-219ENST00000534440 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
RPS3-219ENST00000534440 LRP5O75197 1615 aa13.1□□□□□ -0.31
RPS3-219ENST00000534440 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
RPS3-219ENST00000534440 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
RPS3-219ENST00000534440 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
RPS3-219ENST00000534440 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
RPS3-219ENST00000534440 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.31
RPS3-219ENST00000534440 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
RPS3-219ENST00000534440 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
RPS3-219ENST00000534440 GNAT3A8MTJ3 354 aa13.08□□□□□ -0.32
RPS3-219ENST00000534440 R3HDM1Q15032 1099 aaKnown RBP13.08□□□□□ -0.32
RPS3-219ENST00000534440 EZH2Q15910 746 aaKnown RBP13.08□□□□□ -0.32
RPS3-219ENST00000534440 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
RPS3-219ENST00000534440 IL17REQ8NFR9 667 aa13.08□□□□□ -0.32
RPS3-219ENST00000534440 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
RPS3-219ENST00000534440 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
RPS3-219ENST00000534440 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
RPS3-219ENST00000534440 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
RPS3-219ENST00000534440 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
RPS3-219ENST00000534440 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
RPS3-219ENST00000534440 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms