RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 KCNH5Q8NCM2 988 aa17.72■□□□□ 0.43
KNL1-212ENST00000534204 PCNTO95613 3336 aa17.71■□□□□ 0.43
KNL1-212ENST00000534204 PRELPP51888 382 aa17.71■□□□□ 0.43
KNL1-212ENST00000534204 NBPF1Q3BBV0 1214 aa17.71■□□□□ 0.43
KNL1-212ENST00000534204 JMYQ8N9B5 988 aa17.71■□□□□ 0.43
KNL1-212ENST00000534204 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
KNL1-212ENST00000534204 RGPD2P0DJD1 1756 aa17.71■□□□□ 0.43
KNL1-212ENST00000534204 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
KNL1-212ENST00000534204 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
KNL1-212ENST00000534204 CENPJQ9HC77 1338 aaPredicted RBP17.69■□□□□ 0.42
KNL1-212ENST00000534204 HTRA3P83110 453 aa17.67■□□□□ 0.42
KNL1-212ENST00000534204 IGSF1Q8N6C5 1336 aa17.67■□□□□ 0.42
KNL1-212ENST00000534204 TTC21AQ8NDW8 1320 aa17.67■□□□□ 0.42
KNL1-212ENST00000534204 BRCA1P38398 1863 aaKnown RBP17.67■□□□□ 0.42
KNL1-212ENST00000534204 TOMM70O94826 608 aa17.66■□□□□ 0.42
KNL1-212ENST00000534204 KLRG1Q96E93 195 aa17.66■□□□□ 0.42
KNL1-212ENST00000534204 NLRP2Q9NX02 1062 aa17.66■□□□□ 0.42
KNL1-212ENST00000534204 C4BP0C0L5 1744 aa17.66■□□□□ 0.42
KNL1-212ENST00000534204 WWC3Q9ULE0 1092 aa17.65■□□□□ 0.42
KNL1-212ENST00000534204 N4BP2Q86UW6 1770 aaPredicted RBP17.65■□□□□ 0.42
KNL1-212ENST00000534204 USP31Q70CQ4 1352 aa17.65■□□□□ 0.42
KNL1-212ENST00000534204 SLC34A2O95436 690 aa17.64■□□□□ 0.41
KNL1-212ENST00000534204 PRIM1P49642 420 aaKnown RBP17.64■□□□□ 0.41
KNL1-212ENST00000534204 AMIGO3Q86WK7 504 aa17.64■□□□□ 0.41
KNL1-212ENST00000534204 RAB3GAP2Q9H2M9 1393 aa17.64■□□□□ 0.41
KNL1-212ENST00000534204 PKD1L3Q7Z443 1732 aa17.64■□□□□ 0.41
KNL1-212ENST00000534204 TNS4Q8IZW8 715 aa17.63■□□□□ 0.41
KNL1-212ENST00000534204 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
KNL1-212ENST00000534204 ANKRD24Q8TF21 1146 aa17.62■□□□□ 0.41
KNL1-212ENST00000534204 DDX54Q8TDD1 881 aaKnown RBP17.61■□□□□ 0.41
KNL1-212ENST00000534204 NMRK2Q9NPI5 230 aa17.61■□□□□ 0.41
KNL1-212ENST00000534204 CD163L1Q9NR16 1453 aa17.61■□□□□ 0.41
KNL1-212ENST00000534204 MAP2P11137 1827 aaKnown RBP17.61■□□□□ 0.41
KNL1-212ENST00000534204 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
KNL1-212ENST00000534204 MEGF6O75095 1541 aa17.6■□□□□ 0.41
KNL1-212ENST00000534204 ITGB4P16144 1822 aa17.59■□□□□ 0.41
KNL1-212ENST00000534204 PXDNLA1KZ92 1463 aa17.58■□□□□ 0.41
KNL1-212ENST00000534204 SYTL4Q96C24 671 aaPredicted RBP17.58■□□□□ 0.4
KNL1-212ENST00000534204 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.4
KNL1-212ENST00000534204 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
KNL1-212ENST00000534204 ARFGEF1Q9Y6D6 1849 aa17.57■□□□□ 0.4
KNL1-212ENST00000534204 KTN1Q86UP2 1357 aaKnown RBP17.56■□□□□ 0.4
KNL1-212ENST00000534204 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
KNL1-212ENST00000534204 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
KNL1-212ENST00000534204 SMIM5Q71RC9 77 aa17.54■□□□□ 0.4
KNL1-212ENST00000534204 NME9Q86XW9 330 aa17.54■□□□□ 0.4
KNL1-212ENST00000534204 USP47Q96K76 1375 aa17.53■□□□□ 0.4
KNL1-212ENST00000534204 EVC2Q86UK5 1308 aa17.53■□□□□ 0.4
KNL1-212ENST00000534204 SBF1O95248 1867 aa17.52■□□□□ 0.4
KNL1-212ENST00000534204 C10orf71Q711Q0 1435 aa17.52■□□□□ 0.4
KNL1-212ENST00000534204 KCPQ6ZWJ8 1503 aa17.51■□□□□ 0.39
KNL1-212ENST00000534204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.5■□□□□ 0.39
KNL1-212ENST00000534204 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
KNL1-212ENST00000534204 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
KNL1-212ENST00000534204 FSTL1Q12841 308 aa17.48■□□□□ 0.39
KNL1-212ENST00000534204 IP6K1Q92551 441 aa17.48■□□□□ 0.39
KNL1-212ENST00000534204 ZCRB1Q8TBF4 217 aaKnown RBP17.47■□□□□ 0.39
KNL1-212ENST00000534204 HSPA1AP0DMV8 641 aaKnown RBP17.46■□□□□ 0.39
KNL1-212ENST00000534204 HSPA1BP0DMV9 641 aaKnown RBP17.46■□□□□ 0.39
KNL1-212ENST00000534204 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
KNL1-212ENST00000534204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
KNL1-212ENST00000534204 PLEKHG2Q9H7P9 1386 aa17.44■□□□□ 0.38
KNL1-212ENST00000534204 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
KNL1-212ENST00000534204 EDC4Q6P2E9 1401 aaKnown RBP17.43■□□□□ 0.38
KNL1-212ENST00000534204 NSD3Q9BZ95 1437 aa17.43■□□□□ 0.38
KNL1-212ENST00000534204 PHF14O94880 888 aa17.42■□□□□ 0.38
KNL1-212ENST00000534204 BCS1LQ9Y276 419 aa17.41■□□□□ 0.38
KNL1-212ENST00000534204 MAP3K19Q56UN5 1328 aa17.41■□□□□ 0.38
KNL1-212ENST00000534204 A0A0G2JLW4 131 aa17.4■□□□□ 0.38
KNL1-212ENST00000534204 SSFA2P28290 1259 aa17.4■□□□□ 0.38
KNL1-212ENST00000534204 C9orf131Q5VYM1 1079 aa17.4■□□□□ 0.38
KNL1-212ENST00000534204 LINC00116Q8NCU8 138 aa17.4■□□□□ 0.38
KNL1-212ENST00000534204 AK7Q96M32 723 aa17.4■□□□□ 0.38
KNL1-212ENST00000534204 COL5A3P25940 1745 aaPredicted RBP17.39■□□□□ 0.37
KNL1-212ENST00000534204 FBLN1P23142 703 aa17.39■□□□□ 0.37
KNL1-212ENST00000534204 HOXC9P31274 260 aa17.39■□□□□ 0.37
KNL1-212ENST00000534204 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
KNL1-212ENST00000534204 A0A1W2PP64 1363 aa17.39■□□□□ 0.37
KNL1-212ENST00000534204 MMP10P09238 476 aa17.38■□□□□ 0.37
KNL1-212ENST00000534204 KCNA3P22001 575 aa17.38■□□□□ 0.37
KNL1-212ENST00000534204 TGFB2P61812 414 aa17.38■□□□□ 0.37
KNL1-212ENST00000534204 NBPF6Q5VWK0 638 aa17.38■□□□□ 0.37
KNL1-212ENST00000534204 NBPF4Q96M43 638 aa17.38■□□□□ 0.37
KNL1-212ENST00000534204 DPEP1P16444 411 aa17.37■□□□□ 0.37
KNL1-212ENST00000534204 RRAGCQ9HB90 399 aa17.37■□□□□ 0.37
KNL1-212ENST00000534204 TIAM2Q8IVF5 1701 aa17.37■□□□□ 0.37
KNL1-212ENST00000534204 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
KNL1-212ENST00000534204 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
KNL1-212ENST00000534204 CYP27B1O15528 508 aa17.35■□□□□ 0.37
KNL1-212ENST00000534204 ITPK1Q13572 414 aa17.35■□□□□ 0.37
KNL1-212ENST00000534204 MPRIPQ6WCQ1 1025 aa17.35■□□□□ 0.37
KNL1-212ENST00000534204 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
KNL1-212ENST00000534204 SMC1BQ8NDV3 1235 aa17.35■□□□□ 0.37
KNL1-212ENST00000534204 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
KNL1-212ENST00000534204 CCDC88AQ3V6T2 1871 aa17.35■□□□□ 0.37
KNL1-212ENST00000534204 KDM6AO15550 1401 aaPredicted RBP17.34■□□□□ 0.37
KNL1-212ENST00000534204 MYH14Q7Z406 1995 aaKnown RBP17.33■□□□□ 0.37
KNL1-212ENST00000534204 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.36
KNL1-212ENST00000534204 PCDH11XQ9BZA7 1347 aa17.33■□□□□ 0.36
KNL1-212ENST00000534204 PCDH11YQ9BZA8 1340 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms