RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
PMS2P3-208ENST00000533167 SLFN5Q08AF3 891 aa11.23□□□□□ -0.61
PMS2P3-208ENST00000533167 VPS72Q15906 364 aa11.23□□□□□ -0.61
PMS2P3-208ENST00000533167 WDR63Q8IWG1 891 aa11.23□□□□□ -0.61
PMS2P3-208ENST00000533167 GAS2L2Q8NHY3 880 aa11.23□□□□□ -0.61
PMS2P3-208ENST00000533167 C8orf37Q96NL8 207 aa11.23□□□□□ -0.61
PMS2P3-208ENST00000533167 CYP27B1O15528 508 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 HTATSF1O43719 755 aaKnown RBP11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 ATRNO75882 1429 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 ZNF853P0CG23 659 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 EVA1CP58658 441 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 IL16Q14005 1332 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 AMOTQ4VCS5 1084 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 IL17REQ8NFR9 667 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 CEMIPQ8WUJ3 1361 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 NGLY1Q96IV0 654 aa11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
PMS2P3-208ENST00000533167 MAP3K5Q99683 1374 aa11.21□□□□□ -0.61
PMS2P3-208ENST00000533167 IL2RBP14784 551 aa11.21□□□□□ -0.61
PMS2P3-208ENST00000533167 TATP17735 454 aaPredicted RBP11.21□□□□□ -0.61
PMS2P3-208ENST00000533167 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
PMS2P3-208ENST00000533167 PLEKHO1Q53GL0 409 aaPredicted RBP11.21□□□□□ -0.61
PMS2P3-208ENST00000533167 BARGINQ6ZT62 677 aa11.21□□□□□ -0.61
PMS2P3-208ENST00000533167 RAPGEF4Q8WZA2 1011 aa11.21□□□□□ -0.61
PMS2P3-208ENST00000533167 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.62
PMS2P3-208ENST00000533167 ADAMTS7Q9UKP4 1686 aa11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 KDM6AO15550 1401 aaPredicted RBP11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 AFF2P51816 1311 aa11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 PHKG2P15735 406 aa11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 DCTN1Q14203 1278 aa11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 AKAP4Q5JQC9 854 aa11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 THRAP3Q9Y2W1 955 aaKnown RBP11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
PMS2P3-208ENST00000533167 GNAT3A8MTJ3 354 aa11.19□□□□□ -0.62
PMS2P3-208ENST00000533167 NEFMP07197 916 aa11.19□□□□□ -0.62
PMS2P3-208ENST00000533167 LMOD3Q0VAK6 560 aa11.19□□□□□ -0.62
PMS2P3-208ENST00000533167 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
PMS2P3-208ENST00000533167 ZNF530Q6P9A1 599 aaPredicted RBP11.19□□□□□ -0.62
PMS2P3-208ENST00000533167 USP21Q9UK80 565 aa11.19□□□□□ -0.62
PMS2P3-208ENST00000533167 E9PSI1 815 aa11.18□□□□□ -0.62
PMS2P3-208ENST00000533167 ONECUT3O60422 494 aaPredicted RBP11.18□□□□□ -0.62
PMS2P3-208ENST00000533167 MCM10Q7L590 875 aa11.18□□□□□ -0.62
PMS2P3-208ENST00000533167 ZCRB1Q8TBF4 217 aaKnown RBP11.18□□□□□ -0.62
PMS2P3-208ENST00000533167 LGR6Q9HBX8 967 aa11.18□□□□□ -0.62
PMS2P3-208ENST00000533167 GLI3P10071 1580 aa11.18□□□□□ -0.62
PMS2P3-208ENST00000533167 TNS2Q63HR2 1409 aa11.18□□□□□ -0.62
PMS2P3-208ENST00000533167 CHL1O00533 1208 aa11.17□□□□□ -0.62
PMS2P3-208ENST00000533167 RNMTO43148 476 aaKnown RBP11.17□□□□□ -0.62
PMS2P3-208ENST00000533167 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
PMS2P3-208ENST00000533167 IFT57Q9NWB7 429 aa11.17□□□□□ -0.62
PMS2P3-208ENST00000533167 USP35Q9P2H5 1018 aa11.17□□□□□ -0.62
PMS2P3-208ENST00000533167 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
PMS2P3-208ENST00000533167 SHANK3Q9BYB0 1731 aa11.17□□□□□ -0.62
PMS2P3-208ENST00000533167 MRC1P22897 1456 aa11.17□□□□□ -0.62
PMS2P3-208ENST00000533167 FANCIQ9NVI1 1328 aa11.16□□□□□ -0.62
PMS2P3-208ENST00000533167 IFNL2Q8IZJ0 200 aa11.16□□□□□ -0.62
PMS2P3-208ENST00000533167 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
PMS2P3-208ENST00000533167 RGS17Q9UGC6 210 aaPredicted RBP11.16□□□□□ -0.62
PMS2P3-208ENST00000533167 PARP4Q9UKK3 1724 aaKnown RBP11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 PCDH11XQ9BZA7 1347 aa11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 PCDH11YQ9BZA8 1340 aa11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 THSD7AQ9UPZ6 1657 aa11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 MPRIPQ6WCQ1 1025 aa11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 GJD4Q96KN9 370 aaPredicted RBP11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 TRPC5Q9UL62 973 aaPredicted RBP11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
PMS2P3-208ENST00000533167 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
PMS2P3-208ENST00000533167 CALD1Q05682 793 aaKnown RBP11.14□□□□□ -0.63
PMS2P3-208ENST00000533167 TSR2Q969E8 191 aaKnown RBP11.14□□□□□ -0.63
PMS2P3-208ENST00000533167 DCAF5Q96JK2 942 aa11.14□□□□□ -0.63
PMS2P3-208ENST00000533167 MBIPQ9NS73 344 aa11.14□□□□□ -0.63
PMS2P3-208ENST00000533167 WNK3Q9BYP7 1800 aa11.14□□□□□ -0.63
PMS2P3-208ENST00000533167 RNF123Q5XPI4 1314 aa11.13□□□□□ -0.63
PMS2P3-208ENST00000533167 GNAI1P63096 354 aa11.13□□□□□ -0.63
PMS2P3-208ENST00000533167 C1orf141Q5JVX7 400 aa11.13□□□□□ -0.63
PMS2P3-208ENST00000533167 MARCH10Q8NA82 808 aaPredicted RBP11.13□□□□□ -0.63
PMS2P3-208ENST00000533167 BABAM1Q9NWV8 329 aa11.13□□□□□ -0.63
PMS2P3-208ENST00000533167 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
PMS2P3-208ENST00000533167 TAF7Q15545 349 aaPredicted RBP11.12□□□□□ -0.63
PMS2P3-208ENST00000533167 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
PMS2P3-208ENST00000533167 RTF1Q92541 710 aaKnown RBP11.12□□□□□ -0.63
PMS2P3-208ENST00000533167 MYH16Q9H6N6 1097 aa11.12□□□□□ -0.63
PMS2P3-208ENST00000533167 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
PMS2P3-208ENST00000533167 BCL9O00512 1426 aa11.11□□□□□ -0.63
PMS2P3-208ENST00000533167 EXOC5O00471 708 aa11.11□□□□□ -0.63
PMS2P3-208ENST00000533167 QTRT2Q9H974 415 aaKnown RBP11.11□□□□□ -0.63
PMS2P3-208ENST00000533167 SLC52A2Q9HAB3 445 aa11.11□□□□□ -0.63
PMS2P3-208ENST00000533167 ERVV-2B6SEH9 535 aa11.1□□□□□ -0.63
PMS2P3-208ENST00000533167 KCNQ3O43525 872 aa11.1□□□□□ -0.63
PMS2P3-208ENST00000533167 EXOSC9Q06265 439 aaKnown RBP11.1□□□□□ -0.63
PMS2P3-208ENST00000533167 DDB1Q16531 1140 aa11.1□□□□□ -0.63
PMS2P3-208ENST00000533167 ZNF772Q68DY9 489 aaPredicted RBP11.1□□□□□ -0.63
PMS2P3-208ENST00000533167 TSPYL6Q8N831 410 aa11.1□□□□□ -0.63
PMS2P3-208ENST00000533167 DDX54Q8TDD1 881 aaKnown RBP11.1□□□□□ -0.63
PMS2P3-208ENST00000533167 MIS18AQ9NYP9 233 aa11.1□□□□□ -0.63
PMS2P3-208ENST00000533167 CCDC9Q9Y3X0 531 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms