RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 GYS2P54840 703 aa8.43□□□□□ -1.06
BDNF-217ENST00000533131 MFRPQ9BY79 579 aa8.43□□□□□ -1.06
BDNF-217ENST00000533131 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
BDNF-217ENST00000533131 SLC4A3P48751 1232 aa8.43□□□□□ -1.06
BDNF-217ENST00000533131 HDLBPQ00341 1268 aaKnown RBP8.43□□□□□ -1.06
BDNF-217ENST00000533131 ZNF211Q13398 564 aaPredicted RBP8.43□□□□□ -1.06
BDNF-217ENST00000533131 PDAP1Q13442 181 aaKnown RBP8.43□□□□□ -1.06
BDNF-217ENST00000533131 CCDC34Q96HJ3 373 aa8.43□□□□□ -1.06
BDNF-217ENST00000533131 CEP89Q96ST8 783 aa8.43□□□□□ -1.06
BDNF-217ENST00000533131 ERICH3Q5RHP9 1530 aa8.43□□□□□ -1.06
BDNF-217ENST00000533131 ABCB7O75027 752 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 CD53P19397 219 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 TSPY4P0CV99 314 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 TSPY10P0CW01 314 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 PDE4AP27815 886 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
BDNF-217ENST00000533131 C4orf46Q504U0 113 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 HDAC1Q13547 482 aaPredicted RBP8.42□□□□□ -1.06
BDNF-217ENST00000533131 NBPF8Q3BBV2 869 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 OSCARQ8IYS5 282 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 MAF1Q9H063 256 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 NCKAP5LQ9HCH0 1330 aa8.42□□□□□ -1.06
BDNF-217ENST00000533131 GNL2Q13823 731 aaKnown RBP8.41□□□□□ -1.06
BDNF-217ENST00000533131 ACBD3Q9H3P7 528 aa8.41□□□□□ -1.06
BDNF-217ENST00000533131 NUP160Q12769 1436 aa8.41□□□□□ -1.06
BDNF-217ENST00000533131 GRIN2AQ12879 1464 aa8.41□□□□□ -1.06
BDNF-217ENST00000533131 NPAS4Q8IUM7 802 aa8.41□□□□□ -1.06
BDNF-217ENST00000533131 EXOC6Q8TAG9 804 aa8.41□□□□□ -1.06
BDNF-217ENST00000533131 ARHGEF10LQ9HCE6 1279 aa8.41□□□□□ -1.06
BDNF-217ENST00000533131 SSTR3P32745 418 aaPredicted RBP8.41□□□□□ -1.06
BDNF-217ENST00000533131 TMEM164Q5U3C3 297 aa8.41□□□□□ -1.06
BDNF-217ENST00000533131 SKAP1Q86WV1 359 aa8.41□□□□□ -1.06
BDNF-217ENST00000533131 MKRN1Q9UHC7 482 aaKnown RBP8.41□□□□□ -1.06
BDNF-217ENST00000533131 DHX8Q14562 1220 aaKnown RBP8.4□□□□□ -1.06
BDNF-217ENST00000533131 ZNF513Q8N8E2 541 aaPredicted RBP8.4□□□□□ -1.06
BDNF-217ENST00000533131 FMN1Q68DA7 1419 aa8.4□□□□□ -1.06
BDNF-217ENST00000533131 RRM1P23921 792 aa8.4□□□□□ -1.06
BDNF-217ENST00000533131 COPB2P35606 906 aa8.4□□□□□ -1.06
BDNF-217ENST00000533131 NBPF1Q3BBV0 1214 aa8.4□□□□□ -1.06
BDNF-217ENST00000533131 PNISRQ8TF01 805 aaKnown RBP8.4□□□□□ -1.06
BDNF-217ENST00000533131 PUF60Q9UHX1 559 aaKnown RBP8.4□□□□□ -1.06
BDNF-217ENST00000533131 NUDCQ9Y266 331 aa8.4□□□□□ -1.06
BDNF-217ENST00000533131 DNAJC6O75061 913 aa8.4□□□□□ -1.07
BDNF-217ENST00000533131 IRX3P78415 501 aaPredicted RBP8.4□□□□□ -1.07
BDNF-217ENST00000533131 MAP9Q49MG5 647 aa8.4□□□□□ -1.07
BDNF-217ENST00000533131 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.4□□□□□ -1.07
BDNF-217ENST00000533131 KIF7Q2M1P5 1343 aa8.4□□□□□ -1.07
BDNF-217ENST00000533131 H3BRB1 525 aa8.39□□□□□ -1.07
BDNF-217ENST00000533131 LMNB1P20700 586 aa8.39□□□□□ -1.07
BDNF-217ENST00000533131 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
BDNF-217ENST00000533131 DDX56Q9NY93 547 aaKnown RBP8.39□□□□□ -1.07
BDNF-217ENST00000533131 SWAP70Q9UH65 585 aa8.39□□□□□ -1.07
BDNF-217ENST00000533131 DIS3Q9Y2L1 958 aaKnown RBP8.39□□□□□ -1.07
BDNF-217ENST00000533131 ANP32BQ92688 251 aaKnown RBP8.39□□□□□ -1.07
BDNF-217ENST00000533131 MYCBPQ99417 103 aaPredicted RBP8.39□□□□□ -1.07
BDNF-217ENST00000533131 TBX22Q9Y458 520 aa8.39□□□□□ -1.07
BDNF-217ENST00000533131 RPGRIP1LQ68CZ1 1315 aa8.39□□□□□ -1.07
BDNF-217ENST00000533131 ICE2Q659A1 982 aa8.39□□□□□ -1.07
BDNF-217ENST00000533131 NBPF11Q86T75 865 aa8.39□□□□□ -1.07
BDNF-217ENST00000533131 AS3MTQ9HBK9 375 aa8.39□□□□□ -1.07
BDNF-217ENST00000533131 FGD6Q6ZV73 1430 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 AKNAQ7Z591 1439 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 ST20-MTHFSA0A0A6YYL1 179 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 PPP1R12AO14974 1030 aaPredicted RBP8.38□□□□□ -1.07
BDNF-217ENST00000533131 LGR5O75473 907 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
BDNF-217ENST00000533131 NUBP1P53384 320 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 WDR43Q15061 677 aaKnown RBP eCLIP8.38□□□□□ -1.07
BDNF-217ENST00000533131 IPO9Q96P70 1041 aaKnown RBP8.38□□□□□ -1.07
BDNF-217ENST00000533131 CDC5LQ99459 802 aaKnown RBP8.38□□□□□ -1.07
BDNF-217ENST00000533131 ARPC5LQ9BPX5 153 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 KSR2Q6VAB6 950 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 VPS37AQ8NEZ2 397 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 RCAN3Q9UKA8 241 aa8.38□□□□□ -1.07
BDNF-217ENST00000533131 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
BDNF-217ENST00000533131 ZBED9Q6R2W3 1325 aa8.37□□□□□ -1.07
BDNF-217ENST00000533131 MAPKBP1O60336 1514 aa8.37□□□□□ -1.07
BDNF-217ENST00000533131 CT47B1P0C2W7 299 aaPredicted RBP8.37□□□□□ -1.07
BDNF-217ENST00000533131 PDE3BQ13370 1112 aa8.37□□□□□ -1.07
BDNF-217ENST00000533131 CCDC96Q2M329 555 aa8.37□□□□□ -1.07
BDNF-217ENST00000533131 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.37□□□□□ -1.07
BDNF-217ENST00000533131 PPM1FP49593 454 aaPredicted RBP8.37□□□□□ -1.07
BDNF-217ENST00000533131 RPAINQ86UA6 219 aa8.37□□□□□ -1.07
BDNF-217ENST00000533131 RSPH9Q9H1X1 276 aaPredicted RBP8.37□□□□□ -1.07
BDNF-217ENST00000533131 SH3BP1Q9Y3L3 701 aa8.37□□□□□ -1.07
BDNF-217ENST00000533131 CCDC7Q96M83 1385 aa8.36□□□□□ -1.07
BDNF-217ENST00000533131 SCAMP3O14828 347 aaKnown RBP8.36□□□□□ -1.07
BDNF-217ENST00000533131 KRT18P05783 430 aaKnown RBP8.36□□□□□ -1.07
BDNF-217ENST00000533131 CNGA1P29973 690 aa8.36□□□□□ -1.07
BDNF-217ENST00000533131 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
BDNF-217ENST00000533131 GLYCTKQ8IVS8 523 aa8.36□□□□□ -1.07
BDNF-217ENST00000533131 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
BDNF-217ENST00000533131 PCDHGB7Q9Y5F8 929 aa8.36□□□□□ -1.07
BDNF-217ENST00000533131 SOWAHDA6NJG2 315 aa8.36□□□□□ -1.07
BDNF-217ENST00000533131 SLKQ9H2G2 1235 aaPredicted RBP8.36□□□□□ -1.07
BDNF-217ENST00000533131 INPP5FQ9Y2H2 1132 aa8.36□□□□□ -1.07
BDNF-217ENST00000533131 ZRSR2Q15696 482 aaKnown RBP8.35□□□□□ -1.07
BDNF-217ENST00000533131 EAPPQ56P03 285 aaPredicted RBP8.35□□□□□ -1.07
BDNF-217ENST00000533131 MYSM1Q5VVJ2 828 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms