RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 PCDHB3Q9Y5E6 796 aa7.7□□□□□ -1.18
ATPAF1-210ENST00000532925 BLMP54132 1417 aaPredicted RBP7.69□□□□□ -1.18
ATPAF1-210ENST00000532925 NEXMIFQ5QGS0 1516 aa7.69□□□□□ -1.18
ATPAF1-210ENST00000532925 RAPGEF3O95398 923 aa7.69□□□□□ -1.18
ATPAF1-210ENST00000532925 SLC4A3P48751 1232 aa7.69□□□□□ -1.18
ATPAF1-210ENST00000532925 FAM9BQ8IZU0 186 aa7.69□□□□□ -1.18
ATPAF1-210ENST00000532925 TMC1Q8TDI8 760 aa7.69□□□□□ -1.18
ATPAF1-210ENST00000532925 RNF123Q5XPI4 1314 aa7.69□□□□□ -1.18
ATPAF1-210ENST00000532925 KIF13AQ9H1H9 1805 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 ERVK-7P63135 1459 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 QRICH2Q9H0J4 1663 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 TLL1O43897 1013 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 PDE3BQ13370 1112 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 TMUB1Q9BVT8 246 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 SLC52A1Q9NWF4 448 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 NUDCQ9Y266 331 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 TSPOAP1O95153 1857 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 ARHGEF40Q8TER5 1519 aa7.68□□□□□ -1.18
ATPAF1-210ENST00000532925 ARHGEF28Q8N1W1 1705 aaKnown RBP7.67□□□□□ -1.18
ATPAF1-210ENST00000532925 FAM69CQ0P6D2 419 aa7.67□□□□□ -1.18
ATPAF1-210ENST00000532925 PTGDRQ13258 359 aa7.67□□□□□ -1.18
ATPAF1-210ENST00000532925 KCNV2Q8TDN2 545 aa7.67□□□□□ -1.18
ATPAF1-210ENST00000532925 EMID1Q96A84 441 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-210ENST00000532925 PRR14Q9BWN1 585 aa7.67□□□□□ -1.18
ATPAF1-210ENST00000532925 C14orf93Q9H972 538 aaKnown RBP7.67□□□□□ -1.18
ATPAF1-210ENST00000532925 TMEM131LA2VDJ0 1609 aa7.67□□□□□ -1.18
ATPAF1-210ENST00000532925 CFAP65Q6ZU64 1925 aaKnown RBP7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 RNF223E7ERA6 249 aa7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 DNAJB2P25686 324 aa7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 TRIM67Q6ZTA4 783 aa7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 POLR3GLQ9BT43 218 aa7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 ADGRF5Q8IZF2 1346 aa7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 NINLQ9Y2I6 1382 aa7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 YEATS2Q9ULM3 1422 aa7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 SPATA31D1Q6ZQQ2 1576 aa7.66□□□□□ -1.18
ATPAF1-210ENST00000532925 FAM161AQ3B820 660 aa7.65□□□□□ -1.18
ATPAF1-210ENST00000532925 ZNF787Q6DD87 383 aa7.65□□□□□ -1.18
ATPAF1-210ENST00000532925 ARHGEF1Q92888 912 aaKnown RBP7.65□□□□□ -1.18
ATPAF1-210ENST00000532925 PANK3Q9H999 370 aa7.65□□□□□ -1.18
ATPAF1-210ENST00000532925 CLTCQ00610 1675 aaKnown RBP7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 CENPJQ9HC77 1338 aaPredicted RBP7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 PPEF1O14829 653 aaPredicted RBP7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 SLC19A1P41440 591 aa7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 NGEFQ8N5V2 710 aa7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 RBM46Q8TBY0 533 aaKnown RBP7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 TMEM134Q9H6X4 195 aa7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 TSHZ2Q9NRE2 1034 aa7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 PPP4R2Q9NY27 417 aa7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 KNSTRNQ9Y448 316 aa7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 ADGRG1Q9Y653 693 aa7.64□□□□□ -1.19
ATPAF1-210ENST00000532925 NSD2O96028 1365 aa7.63□□□□□ -1.19
ATPAF1-210ENST00000532925 RCCD1A6NED2 376 aa7.63□□□□□ -1.19
ATPAF1-210ENST00000532925 CFAP70Q5T0N1 1121 aa7.63□□□□□ -1.19
ATPAF1-210ENST00000532925 GGT6Q6P531 493 aa7.63□□□□□ -1.19
ATPAF1-210ENST00000532925 MYO5BQ9ULV0 1848 aa7.63□□□□□ -1.19
ATPAF1-210ENST00000532925 DLC1Q96QB1 1528 aa7.62□□□□□ -1.19
ATPAF1-210ENST00000532925 NUTM2FA1L443 756 aa7.62□□□□□ -1.19
ATPAF1-210ENST00000532925 ACTN4O43707 911 aaKnown RBP7.62□□□□□ -1.19
ATPAF1-210ENST00000532925 S1PR4O95977 384 aa7.62□□□□□ -1.19
ATPAF1-210ENST00000532925 CFHP08603 1231 aa7.62□□□□□ -1.19
ATPAF1-210ENST00000532925 PLCB2Q00722 1185 aa7.62□□□□□ -1.19
ATPAF1-210ENST00000532925 KMT5BQ4FZB7 885 aa7.61□□□□□ -1.19
ATPAF1-210ENST00000532925 SPRYD7Q5W111 196 aa7.61□□□□□ -1.19
ATPAF1-210ENST00000532925 SLC10A3P09131 477 aa7.6□□□□□ -1.19
ATPAF1-210ENST00000532925 LIAT1Q6ZQX7 453 aa7.6□□□□□ -1.19
ATPAF1-210ENST00000532925 ANKLE1Q8NAG6 615 aa7.6□□□□□ -1.19
ATPAF1-210ENST00000532925 TULP4Q9NRJ4 1543 aa7.6□□□□□ -1.19
ATPAF1-210ENST00000532925 SETD1AO15047 1707 aaKnown RBP7.6□□□□□ -1.19
ATPAF1-210ENST00000532925 ANKRD26Q9UPS8 1709 aa7.6□□□□□ -1.19
ATPAF1-210ENST00000532925 POLR3AO14802 1390 aaPredicted RBP7.59□□□□□ -1.19
ATPAF1-210ENST00000532925 KNDC1Q76NI1 1749 aa7.59□□□□□ -1.19
ATPAF1-210ENST00000532925 PPP2R1AP30153 589 aa7.59□□□□□ -1.19
ATPAF1-210ENST00000532925 ZNF598Q86UK7 904 aaKnown RBP7.59□□□□□ -1.19
ATPAF1-210ENST00000532925 ZNF775Q96BV0 537 aaPredicted RBP7.59□□□□□ -1.19
ATPAF1-210ENST00000532925 MED14O60244 1454 aa7.59□□□□□ -1.19
ATPAF1-210ENST00000532925 ATAD2Q6PL18 1390 aa7.59□□□□□ -1.2
ATPAF1-210ENST00000532925 ANKRD36BQ8N2N9 1353 aa7.59□□□□□ -1.2
ATPAF1-210ENST00000532925 EVC2Q86UK5 1308 aa7.58□□□□□ -1.2
ATPAF1-210ENST00000532925 PTPRMP28827 1452 aa7.58□□□□□ -1.2
ATPAF1-210ENST00000532925 HAP1P54257 671 aaPredicted RBP7.58□□□□□ -1.2
ATPAF1-210ENST00000532925 IDI1Q13907 227 aa7.58□□□□□ -1.2
ATPAF1-210ENST00000532925 PKDCCQ504Y2 493 aa7.58□□□□□ -1.2
ATPAF1-210ENST00000532925 CC2D1BQ5T0F9 858 aaKnown RBP7.58□□□□□ -1.2
ATPAF1-210ENST00000532925 ALKQ9UM73 1620 aa7.58□□□□□ -1.2
ATPAF1-210ENST00000532925 A2ML1A8K2U0 1454 aa7.57□□□□□ -1.2
ATPAF1-210ENST00000532925 ADH1BP00325 375 aa7.57□□□□□ -1.2
ATPAF1-210ENST00000532925 MYT1Q01538 1121 aa7.57□□□□□ -1.2
ATPAF1-210ENST00000532925 ZNF697Q5TEC3 545 aa7.57□□□□□ -1.2
ATPAF1-210ENST00000532925 SHPRHQ149N8 1683 aa7.57□□□□□ -1.2
ATPAF1-210ENST00000532925 ZNF521Q96K83 1311 aa7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 NSD3Q9BZ95 1437 aa7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 YTHDC2Q9H6S0 1430 aaKnown RBP7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 TNFRSF10AO00220 468 aa7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 PRR20EP86478 221 aa7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 PRR20CP86479 221 aa7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 PRR20DP86480 221 aa7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 PRR20BP86481 221 aa7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 PRR20AP86496 221 aa7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 WDR43Q15061 677 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATPAF1-210ENST00000532925 PLA2G2CQ5R387 149 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms