RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 KAT6BQ8WYB5 2073 aa24.68■■□□□ 1.54
SMG1-203ENST00000532700 TXNRD1Q16881 649 aa24.67■■□□□ 1.54
SMG1-203ENST00000532700 PKD1L3Q7Z443 1732 aa24.66■■□□□ 1.54
SMG1-203ENST00000532700 TOGARAM1Q9Y4F4 1720 aa24.66■■□□□ 1.54
SMG1-203ENST00000532700 CGNL1Q0VF96 1302 aa24.66■■□□□ 1.54
SMG1-203ENST00000532700 PANK3Q9H999 370 aa24.66■■□□□ 1.54
SMG1-203ENST00000532700 NSD2O96028 1365 aa24.66■■□□□ 1.54
SMG1-203ENST00000532700 NCAPD2Q15021 1401 aa24.65■■□□□ 1.54
SMG1-203ENST00000532700 SMG6Q86US8 1419 aaKnown RBP24.65■■□□□ 1.54
SMG1-203ENST00000532700 KIF24Q5T7B8 1368 aa24.65■■□□□ 1.54
SMG1-203ENST00000532700 NBPF14Q5TI25 921 aa24.64■■□□□ 1.54
SMG1-203ENST00000532700 PPM1GO15355 546 aaPredicted RBP24.63■■□□□ 1.53
SMG1-203ENST00000532700 TNNT2P45379 298 aaPredicted RBP24.63■■□□□ 1.53
SMG1-203ENST00000532700 POLKQ9UBT6 870 aa24.63■■□□□ 1.53
SMG1-203ENST00000532700 LY75O60449 1722 aa24.63■■□□□ 1.53
SMG1-203ENST00000532700 ZCRB1Q8TBF4 217 aaKnown RBP24.62■■□□□ 1.53
SMG1-203ENST00000532700 TUBGCP6Q96RT7 1819 aa24.61■■□□□ 1.53
SMG1-203ENST00000532700 LRRC4BQ9NT99 713 aa24.6■■□□□ 1.53
SMG1-203ENST00000532700 KIF7Q2M1P5 1343 aa24.6■■□□□ 1.53
SMG1-203ENST00000532700 WASHC2AQ641Q2 1341 aa24.59■■□□□ 1.53
SMG1-203ENST00000532700 PRIM1P49642 420 aaKnown RBP24.58■■□□□ 1.53
SMG1-203ENST00000532700 ITGB4P16144 1822 aa24.57■■□□□ 1.52
SMG1-203ENST00000532700 KCNQ4P56696 695 aa24.57■■□□□ 1.52
SMG1-203ENST00000532700 ZNF827Q17R98 1081 aa24.56■■□□□ 1.52
SMG1-203ENST00000532700 RAPGEF4Q8WZA2 1011 aa24.55■■□□□ 1.52
SMG1-203ENST00000532700 SYTL4Q96C24 671 aaPredicted RBP24.55■■□□□ 1.52
SMG1-203ENST00000532700 EYA1Q99502 592 aa24.55■■□□□ 1.52
SMG1-203ENST00000532700 CYP27B1O15528 508 aa24.54■■□□□ 1.52
SMG1-203ENST00000532700 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
SMG1-203ENST00000532700 SLC15A2Q16348 729 aa24.54■■□□□ 1.52
SMG1-203ENST00000532700 EIF4A2Q14240 407 aaKnown RBP24.53■■□□□ 1.52
SMG1-203ENST00000532700 ZBTB7AO95365 584 aa24.51■■□□□ 1.51
SMG1-203ENST00000532700 STK32BQ9NY57 414 aa24.51■■□□□ 1.51
SMG1-203ENST00000532700 QSER1Q2KHR3 1735 aa24.51■■□□□ 1.51
SMG1-203ENST00000532700 PCDH11XQ9BZA7 1347 aa24.5■■□□□ 1.51
SMG1-203ENST00000532700 PCDH11YQ9BZA8 1340 aa24.5■■□□□ 1.51
SMG1-203ENST00000532700 AMER1Q5JTC6 1135 aaPredicted RBP24.48■■□□□ 1.51
SMG1-203ENST00000532700 SPON1Q9HCB6 807 aa24.48■■□□□ 1.51
SMG1-203ENST00000532700 TAF1LQ8IZX4 1826 aa24.47■■□□□ 1.51
SMG1-203ENST00000532700 C5P01031 1676 aa24.47■■□□□ 1.51
SMG1-203ENST00000532700 PTGER2P43116 358 aa24.47■■□□□ 1.51
SMG1-203ENST00000532700 AKT1S1Q96B36 256 aa24.46■■□□□ 1.51
SMG1-203ENST00000532700 ATF5Q9Y2D1 282 aaPredicted RBP24.46■■□□□ 1.51
SMG1-203ENST00000532700 IGSF1Q8N6C5 1336 aa24.44■■□□□ 1.5
SMG1-203ENST00000532700 MORC1Q86VD1 984 aa24.44■■□□□ 1.5
SMG1-203ENST00000532700 PER1O15534 1290 aaPredicted RBP24.43■■□□□ 1.5
SMG1-203ENST00000532700 KNSTRNQ9Y448 316 aa24.43■■□□□ 1.5
SMG1-203ENST00000532700 COL24A1Q17RW2 1714 aa24.42■■□□□ 1.5
SMG1-203ENST00000532700 SLC27A3Q5K4L6 730 aa24.41■■□□□ 1.5
SMG1-203ENST00000532700 AEBP1Q8IUX7 1158 aa24.41■■□□□ 1.5
SMG1-203ENST00000532700 SGIP1Q9BQI5 828 aa24.41■■□□□ 1.5
SMG1-203ENST00000532700 PNPLA7Q6ZV29 1317 aa24.4■■□□□ 1.5
SMG1-203ENST00000532700 MPRIPQ6WCQ1 1025 aa24.4■■□□□ 1.5
SMG1-203ENST00000532700 NKX1-1Q15270 411 aaPredicted RBP24.39■■□□□ 1.49
SMG1-203ENST00000532700 CCNL1Q9UK58 526 aaPredicted RBP24.38■■□□□ 1.49
SMG1-203ENST00000532700 PALLDQ8WX93 1383 aa24.38■■□□□ 1.49
SMG1-203ENST00000532700 PHKG2P15735 406 aa24.37■■□□□ 1.49
SMG1-203ENST00000532700 PIGBQ92521 554 aa24.37■■□□□ 1.49
SMG1-203ENST00000532700 PPP1R1BQ9UD71 204 aaPredicted RBP24.37■■□□□ 1.49
SMG1-203ENST00000532700 MTFR1LQ9H019 292 aa24.36■■□□□ 1.49
SMG1-203ENST00000532700 SPG7Q9UQ90 795 aa24.36■■□□□ 1.49
SMG1-203ENST00000532700 C4BP0C0L5 1744 aa24.35■■□□□ 1.49
SMG1-203ENST00000532700 CC2D1BQ5T0F9 858 aaKnown RBP24.35■■□□□ 1.49
SMG1-203ENST00000532700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.34■■□□□ 1.491e-9■■■■□ 22.8
SMG1-203ENST00000532700 KDM6AO15550 1401 aaPredicted RBP24.34■■□□□ 1.49
SMG1-203ENST00000532700 IL13P35225 146 aa24.33■■□□□ 1.49
SMG1-203ENST00000532700 AMIGO3Q86WK7 504 aa24.33■■□□□ 1.49
SMG1-203ENST00000532700 UBR3Q6ZT12 1888 aa24.32■■□□□ 1.48
SMG1-203ENST00000532700 CNGB1Q14028 1251 aaPredicted RBP24.32■■□□□ 1.48
SMG1-203ENST00000532700 SMIM5Q71RC9 77 aa24.31■■□□□ 1.48
SMG1-203ENST00000532700 TFCP2L1Q9NZI6 479 aa24.31■■□□□ 1.48
SMG1-203ENST00000532700 COL3A1P02461 1466 aaPredicted RBP24.31■■□□□ 1.48
SMG1-203ENST00000532700 KDRP35968 1356 aa24.3■■□□□ 1.48
SMG1-203ENST00000532700 MTHFSP49914 203 aa24.3■■□□□ 1.48
SMG1-203ENST00000532700 IFNL2Q8IZJ0 200 aa24.3■■□□□ 1.48
SMG1-203ENST00000532700 VIRMAQ69YN4 1812 aaKnown RBP24.3■■□□□ 1.48
SMG1-203ENST00000532700 FHDC1Q9C0D6 1143 aaPredicted RBP24.29■■□□□ 1.48
SMG1-203ENST00000532700 ASAP1Q9ULH1 1129 aa24.29■■□□□ 1.48
SMG1-203ENST00000532700 SULT6B1Q6IMI4 303 aa24.28■■□□□ 1.48
SMG1-203ENST00000532700 COL23A1Q86Y22 540 aaPredicted RBP24.28■■□□□ 1.48
SMG1-203ENST00000532700 PLEKHG2Q9H7P9 1386 aa24.28■■□□□ 1.48
SMG1-203ENST00000532700 SCN11AQ9UI33 1791 aa24.27■■□□□ 1.48
SMG1-203ENST00000532700 ZNF530Q6P9A1 599 aaPredicted RBP24.26■■□□□ 1.47
SMG1-203ENST00000532700 TMOD3Q9NYL9 352 aa24.26■■□□□ 1.47
SMG1-203ENST00000532700 ITPK1Q13572 414 aa24.25■■□□□ 1.47
SMG1-203ENST00000532700 COL5A3P25940 1745 aaPredicted RBP24.24■■□□□ 1.47
SMG1-203ENST00000532700 LINC00116Q8NCU8 138 aa24.24■■□□□ 1.47
SMG1-203ENST00000532700 SYT17Q9BSW7 474 aa24.24■■□□□ 1.47
SMG1-203ENST00000532700 ATG3Q9NT62 314 aa24.24■■□□□ 1.47
SMG1-203ENST00000532700 NPC1L1Q9UHC9 1359 aa24.24■■□□□ 1.47
SMG1-203ENST00000532700 SLC4A9Q96Q91 983 aa24.23■■□□□ 1.47
SMG1-203ENST00000532700 ARXQ96QS3 562 aa24.23■■□□□ 1.47
SMG1-203ENST00000532700 HMOX1P09601 288 aa24.22■■□□□ 1.47
SMG1-203ENST00000532700 PLEKHO1Q53GL0 409 aaPredicted RBP24.22■■□□□ 1.47
SMG1-203ENST00000532700 MSL1Q68DK7 614 aa24.22■■□□□ 1.47
SMG1-203ENST00000532700 SMARCC1Q92922 1105 aaPredicted RBP24.22■■□□□ 1.47
SMG1-203ENST00000532700 LOC102724428A0A0B4J2F2 783 aa24.21■■□□□ 1.47
SMG1-203ENST00000532700 SIK1P57059 783 aa24.21■■□□□ 1.47
SMG1-203ENST00000532700 ZNF831Q5JPB2 1677 aa24.21■■□□□ 1.47
SMG1-203ENST00000532700 SLC16A10Q8TF71 515 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms