RNA–Protein interactions for RNA: ENST00000531933.1

ATG13-218, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-218ENST00000531933 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
ATG13-218ENST00000531933 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
ATG13-218ENST00000531933 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
ATG13-218ENST00000531933 PKD1L3Q7Z443 1732 aa13.37□□□□□ -0.27
ATG13-218ENST00000531933 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
ATG13-218ENST00000531933 MARCH10Q8NA82 808 aaPredicted RBP13.37□□□□□ -0.27
ATG13-218ENST00000531933 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
ATG13-218ENST00000531933 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
ATG13-218ENST00000531933 BAG6P46379 1132 aa13.36□□□□□ -0.27
ATG13-218ENST00000531933 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
ATG13-218ENST00000531933 BCL9O00512 1426 aa13.36□□□□□ -0.27
ATG13-218ENST00000531933 TRIM37O94972 964 aa13.35□□□□□ -0.27
ATG13-218ENST00000531933 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.35□□□□□ -0.276e-7■■□□□ 12.6
ATG13-218ENST00000531933 SHANK3Q9BYB0 1731 aa13.35□□□□□ -0.27
ATG13-218ENST00000531933 TNS1Q9HBL0 1735 aaKnown RBP13.35□□□□□ -0.27
ATG13-218ENST00000531933 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
ATG13-218ENST00000531933 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
ATG13-218ENST00000531933 AMOTQ4VCS5 1084 aa13.34□□□□□ -0.27
ATG13-218ENST00000531933 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
ATG13-218ENST00000531933 KDRP35968 1356 aa13.33□□□□□ -0.27
ATG13-218ENST00000531933 NHSQ6T4R5 1651 aa13.33□□□□□ -0.28
ATG13-218ENST00000531933 APBA3O96018 575 aa13.32□□□□□ -0.28
ATG13-218ENST00000531933 HMOX1P09601 288 aa13.32□□□□□ -0.28
ATG13-218ENST00000531933 AEBP1Q8IUX7 1158 aa13.32□□□□□ -0.28
ATG13-218ENST00000531933 DOT1LQ8TEK3 1739 aa13.32□□□□□ -0.28
ATG13-218ENST00000531933 ANP32CO43423 234 aa13.31□□□□□ -0.28
ATG13-218ENST00000531933 NEFMP07197 916 aa13.31□□□□□ -0.28
ATG13-218ENST00000531933 U2AF1L5P0DN76 240 aaPredicted RBP13.31□□□□□ -0.28
ATG13-218ENST00000531933 U2AF1Q01081 240 aaKnown RBP eCLIP13.31□□□□□ -0.28
ATG13-218ENST00000531933 C1orf141Q5JVX7 400 aa13.31□□□□□ -0.28
ATG13-218ENST00000531933 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
ATG13-218ENST00000531933 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
ATG13-218ENST00000531933 BCL11BQ9C0K0 894 aaPredicted RBP13.31□□□□□ -0.28
ATG13-218ENST00000531933 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
ATG13-218ENST00000531933 KAT6BQ8WYB5 2073 aa13.3□□□□□ -0.28
ATG13-218ENST00000531933 HSP90AB1P08238 724 aaKnown RBP13.3□□□□□ -0.28
ATG13-218ENST00000531933 ZNF530Q6P9A1 599 aaPredicted RBP13.3□□□□□ -0.28
ATG13-218ENST00000531933 SYTL4Q96C24 671 aaPredicted RBP13.3□□□□□ -0.28
ATG13-218ENST00000531933 PNNQ9H307 717 aaKnown RBP13.29□□□□□ -0.28
ATG13-218ENST00000531933 RGPD3A6NKT7 1758 aaPredicted RBP13.28□□□□□ -0.28
ATG13-218ENST00000531933 RGPD4Q7Z3J3 1758 aa13.28□□□□□ -0.28
ATG13-218ENST00000531933 CYP27B1O15528 508 aa13.28□□□□□ -0.28
ATG13-218ENST00000531933 PHKG2P15735 406 aa13.28□□□□□ -0.28
ATG13-218ENST00000531933 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
ATG13-218ENST00000531933 BTAF1O14981 1849 aa13.27□□□□□ -0.28
ATG13-218ENST00000531933 KCNQ2O43526 872 aa13.26□□□□□ -0.29
ATG13-218ENST00000531933 FCHSD2O94868 740 aa13.26□□□□□ -0.29
ATG13-218ENST00000531933 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
ATG13-218ENST00000531933 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
ATG13-218ENST00000531933 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
ATG13-218ENST00000531933 WDR43Q15061 677 aaKnown RBP eCLIP13.26□□□□□ -0.29
ATG13-218ENST00000531933 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
ATG13-218ENST00000531933 GAS2L2Q8NHY3 880 aa13.26□□□□□ -0.29
ATG13-218ENST00000531933 DCAF5Q96JK2 942 aa13.26□□□□□ -0.29
ATG13-218ENST00000531933 PLSCR1O15162 318 aa13.25□□□□□ -0.29
ATG13-218ENST00000531933 AKAP4Q5JQC9 854 aa13.25□□□□□ -0.29
ATG13-218ENST00000531933 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
ATG13-218ENST00000531933 TOGARAM1Q9Y4F4 1720 aa13.25□□□□□ -0.29
ATG13-218ENST00000531933 EP400Q96L91 3159 aa13.24□□□□□ -0.29
ATG13-218ENST00000531933 MAPK8IP3Q9UPT6 1336 aa13.24□□□□□ -0.29
ATG13-218ENST00000531933 TMOD3Q9NYL9 352 aa13.24□□□□□ -0.29
ATG13-218ENST00000531933 ITGB4P16144 1822 aa13.24□□□□□ -0.29
ATG13-218ENST00000531933 EZH2Q15910 746 aaKnown RBP13.23□□□□□ -0.29
ATG13-218ENST00000531933 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
ATG13-218ENST00000531933 CAMKK2Q96RR4 588 aa13.23□□□□□ -0.29
ATG13-218ENST00000531933 RREB1Q92766 1687 aa13.23□□□□□ -0.29
ATG13-218ENST00000531933 ERVV-2B6SEH9 535 aa13.22□□□□□ -0.29
ATG13-218ENST00000531933 MTHFSDQ2M296 383 aaKnown RBP13.22□□□□□ -0.29
ATG13-218ENST00000531933 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
ATG13-218ENST00000531933 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
ATG13-218ENST00000531933 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
ATG13-218ENST00000531933 MAP3K5Q99683 1374 aa13.21□□□□□ -0.29
ATG13-218ENST00000531933 HMGB2P26583 209 aaKnown RBP13.21□□□□□ -0.29
ATG13-218ENST00000531933 CABP4P57796 275 aa13.21□□□□□ -0.29
ATG13-218ENST00000531933 NBPF14Q5TI25 921 aa13.21□□□□□ -0.29
ATG13-218ENST00000531933 NUP188Q5SRE5 1749 aa13.21□□□□□ -0.3
ATG13-218ENST00000531933 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
ATG13-218ENST00000531933 GNAT3A8MTJ3 354 aa13.2□□□□□ -0.3
ATG13-218ENST00000531933 TXNRD1Q16881 649 aa13.2□□□□□ -0.3
ATG13-218ENST00000531933 RTF1Q92541 710 aaKnown RBP13.2□□□□□ -0.3
ATG13-218ENST00000531933 KDM6AO15550 1401 aaPredicted RBP13.2□□□□□ -0.3
ATG13-218ENST00000531933 TEFQ10587 303 aa13.18□□□□□ -0.3
ATG13-218ENST00000531933 SLC27A3Q5K4L6 730 aa13.18□□□□□ -0.3
ATG13-218ENST00000531933 PIGBQ92521 554 aa13.18□□□□□ -0.3
ATG13-218ENST00000531933 PHACTR3Q96KR7 559 aa13.18□□□□□ -0.3
ATG13-218ENST00000531933 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
ATG13-218ENST00000531933 LY75O60449 1722 aa13.18□□□□□ -0.3
ATG13-218ENST00000531933 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
ATG13-218ENST00000531933 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
ATG13-218ENST00000531933 ADAMTS7Q9UKP4 1686 aa13.17□□□□□ -0.3
ATG13-218ENST00000531933 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
ATG13-218ENST00000531933 SLC52A2Q9HAB3 445 aa13.16□□□□□ -0.3
ATG13-218ENST00000531933 STK32BQ9NY57 414 aa13.16□□□□□ -0.3
ATG13-218ENST00000531933 CCNL1Q9UK58 526 aaPredicted RBP13.16□□□□□ -0.3
ATG13-218ENST00000531933 MRC1P22897 1456 aa13.16□□□□□ -0.3
ATG13-218ENST00000531933 LMOD3Q0VAK6 560 aa13.15□□□□□ -0.3
ATG13-218ENST00000531933 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
ATG13-218ENST00000531933 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
ATG13-218ENST00000531933 RUNDC1Q96C34 613 aa13.15□□□□□ -0.3
ATG13-218ENST00000531933 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms