RNA–Protein interactions for RNA: ENST00000531593.1

GPAA1-216, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-216ENST00000531593 PRIM1P49642 420 aaKnown RBP22.72■■□□□ 1.23
GPAA1-216ENST00000531593 ATF5Q9Y2D1 282 aaPredicted RBP22.72■■□□□ 1.23
GPAA1-216ENST00000531593 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
GPAA1-216ENST00000531593 EIF4G2P78344 907 aaKnown RBP eCLIP22.71■■□□□ 1.23
GPAA1-216ENST00000531593 RAPGEF4Q8WZA2 1011 aa22.71■■□□□ 1.23
GPAA1-216ENST00000531593 FLT4P35916 1363 aa22.71■■□□□ 1.23
GPAA1-216ENST00000531593 LRRC4BQ9NT99 713 aa22.7■■□□□ 1.22
GPAA1-216ENST00000531593 INSRP06213 1382 aa22.7■■□□□ 1.22
GPAA1-216ENST00000531593 TATP17735 454 aaPredicted RBP22.69■■□□□ 1.22
GPAA1-216ENST00000531593 KCNQ4P56696 695 aa22.69■■□□□ 1.22
GPAA1-216ENST00000531593 KAT6BQ8WYB5 2073 aa22.69■■□□□ 1.22
GPAA1-216ENST00000531593 BTAF1O14981 1849 aa22.68■■□□□ 1.22
GPAA1-216ENST00000531593 CGNL1Q0VF96 1302 aa22.68■■□□□ 1.22
GPAA1-216ENST00000531593 TNNT2P45379 298 aaPredicted RBP22.68■■□□□ 1.22
GPAA1-216ENST00000531593 ZNF827Q17R98 1081 aa22.68■■□□□ 1.22
GPAA1-216ENST00000531593 CASZ1Q86V15 1759 aa22.66■■□□□ 1.22
GPAA1-216ENST00000531593 NSD2O96028 1365 aa22.63■■□□□ 1.21
GPAA1-216ENST00000531593 PANK3Q9H999 370 aa22.63■■□□□ 1.21
GPAA1-216ENST00000531593 KIF24Q5T7B8 1368 aa22.63■■□□□ 1.21
GPAA1-216ENST00000531593 PTGER2P43116 358 aa22.62■■□□□ 1.21
GPAA1-216ENST00000531593 DOT1LQ8TEK3 1739 aa22.62■■□□□ 1.21
GPAA1-216ENST00000531593 SHANK3Q9BYB0 1731 aa22.62■■□□□ 1.21
GPAA1-216ENST00000531593 POLKQ9UBT6 870 aa22.61■■□□□ 1.21
GPAA1-216ENST00000531593 PAPPAQ13219 1627 aa22.6■■□□□ 1.21
GPAA1-216ENST00000531593 SLC27A3Q5K4L6 730 aa22.6■■□□□ 1.21
GPAA1-216ENST00000531593 MTFR1LQ9H019 292 aa22.6■■□□□ 1.21
GPAA1-216ENST00000531593 PCDH11XQ9BZA7 1347 aa22.59■■□□□ 1.21
GPAA1-216ENST00000531593 PCDH11YQ9BZA8 1340 aa22.59■■□□□ 1.21
GPAA1-216ENST00000531593 WASHC2AQ641Q2 1341 aa22.58■■□□□ 1.21
GPAA1-216ENST00000531593 CYP27B1O15528 508 aa22.58■■□□□ 1.21
GPAA1-216ENST00000531593 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
GPAA1-216ENST00000531593 EYA1Q99502 592 aa22.58■■□□□ 1.21
GPAA1-216ENST00000531593 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
GPAA1-216ENST00000531593 TFCP2L1Q9NZI6 479 aa22.56■■□□□ 1.2
GPAA1-216ENST00000531593 MPRIPQ6WCQ1 1025 aa22.55■■□□□ 1.2
GPAA1-216ENST00000531593 EIF4A2Q14240 407 aaKnown RBP22.54■■□□□ 1.2
GPAA1-216ENST00000531593 FHDC1Q9C0D6 1143 aaPredicted RBP22.54■■□□□ 1.2
GPAA1-216ENST00000531593 PNPLA7Q6ZV29 1317 aa22.54■■□□□ 1.2
GPAA1-216ENST00000531593 DCAF8L1A6NGE4 600 aa22.53■■□□□ 1.2
GPAA1-216ENST00000531593 SGIP1Q9BQI5 828 aa22.53■■□□□ 1.2
GPAA1-216ENST00000531593 SPG7Q9UQ90 795 aa22.52■■□□□ 1.2
GPAA1-216ENST00000531593 MSH5O43196 834 aa22.51■■□□□ 1.19
GPAA1-216ENST00000531593 ARXQ96QS3 562 aa22.51■■□□□ 1.19
GPAA1-216ENST00000531593 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
GPAA1-216ENST00000531593 NCAPD2Q15021 1401 aa22.5■■□□□ 1.19
GPAA1-216ENST00000531593 MORC1Q86VD1 984 aa22.5■■□□□ 1.19
GPAA1-216ENST00000531593 KLHL34Q8N239 644 aa22.5■■□□□ 1.19
GPAA1-216ENST00000531593 SYT17Q9BSW7 474 aa22.5■■□□□ 1.19
GPAA1-216ENST00000531593 ANKRD26Q9UPS8 1709 aa22.49■■□□□ 1.19
GPAA1-216ENST00000531593 PALLDQ8WX93 1383 aa22.49■■□□□ 1.19
GPAA1-216ENST00000531593 YY1P25490 414 aa22.48■■□□□ 1.19
GPAA1-216ENST00000531593 PIGBQ92521 554 aa22.47■■□□□ 1.19
GPAA1-216ENST00000531593 KNSTRNQ9Y448 316 aa22.47■■□□□ 1.19
GPAA1-216ENST00000531593 LY75O60449 1722 aa22.47■■□□□ 1.19
GPAA1-216ENST00000531593 SLC16A10Q8TF71 515 aa22.45■■□□□ 1.18
GPAA1-216ENST00000531593 KIF7Q2M1P5 1343 aa22.45■■□□□ 1.18
GPAA1-216ENST00000531593 PKD1L3Q7Z443 1732 aa22.45■■□□□ 1.18
GPAA1-216ENST00000531593 PHKG2P15735 406 aa22.44■■□□□ 1.18
GPAA1-216ENST00000531593 POLD1P28340 1107 aa22.44■■□□□ 1.18
GPAA1-216ENST00000531593 NKX1-1Q15270 411 aaPredicted RBP22.44■■□□□ 1.18
GPAA1-216ENST00000531593 COL23A1Q86Y22 540 aaPredicted RBP22.44■■□□□ 1.18
GPAA1-216ENST00000531593 TOGARAM1Q9Y4F4 1720 aa22.44■■□□□ 1.18
GPAA1-216ENST00000531593 MSL1Q68DK7 614 aa22.43■■□□□ 1.18
GPAA1-216ENST00000531593 IFNL2Q8IZJ0 200 aa22.43■■□□□ 1.18
GPAA1-216ENST00000531593 IGSF1Q8N6C5 1336 aa22.42■■□□□ 1.18
GPAA1-216ENST00000531593 SMIM5Q71RC9 77 aa22.42■■□□□ 1.18
GPAA1-216ENST00000531593 SMARCC1Q92922 1105 aaPredicted RBP22.42■■□□□ 1.18
GPAA1-216ENST00000531593 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.42■■□□□ 1.18
GPAA1-216ENST00000531593 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
GPAA1-216ENST00000531593 TUBGCP6Q96RT7 1819 aa22.42■■□□□ 1.18
GPAA1-216ENST00000531593 CNGB1Q14028 1251 aaPredicted RBP22.4■■□□□ 1.18
GPAA1-216ENST00000531593 AEBP1Q8IUX7 1158 aa22.4■■□□□ 1.18
GPAA1-216ENST00000531593 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
GPAA1-216ENST00000531593 PHF14O94880 888 aa22.38■■□□□ 1.17
GPAA1-216ENST00000531593 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
GPAA1-216ENST00000531593 AK7Q96M32 723 aa22.38■■□□□ 1.17
GPAA1-216ENST00000531593 QSER1Q2KHR3 1735 aa22.37■■□□□ 1.17
GPAA1-216ENST00000531593 ITGB4P16144 1822 aa22.37■■□□□ 1.17
GPAA1-216ENST00000531593 LOC102724428A0A0B4J2F2 783 aa22.37■■□□□ 1.17
GPAA1-216ENST00000531593 SIK1P57059 783 aa22.37■■□□□ 1.17
GPAA1-216ENST00000531593 PLEKHO1Q53GL0 409 aaPredicted RBP22.37■■□□□ 1.17
GPAA1-216ENST00000531593 ZNF530Q6P9A1 599 aaPredicted RBP22.37■■□□□ 1.17
GPAA1-216ENST00000531593 AMIGO3Q86WK7 504 aa22.37■■□□□ 1.17
GPAA1-216ENST00000531593 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
GPAA1-216ENST00000531593 CC2D1BQ5T0F9 858 aaKnown RBP22.35■■□□□ 1.17
GPAA1-216ENST00000531593 SULT6B1Q6IMI4 303 aa22.35■■□□□ 1.17
GPAA1-216ENST00000531593 LINC00116Q8NCU8 138 aa22.35■■□□□ 1.17
GPAA1-216ENST00000531593 NLGN2Q8NFZ4 835 aa22.35■■□□□ 1.17
GPAA1-216ENST00000531593 C5P01031 1676 aa22.35■■□□□ 1.17
GPAA1-216ENST00000531593 ATG3Q9NT62 314 aa22.34■■□□□ 1.17
GPAA1-216ENST00000531593 MAP3K5Q99683 1374 aa22.34■■□□□ 1.17
GPAA1-216ENST00000531593 IL13P35225 146 aa22.33■■□□□ 1.17
GPAA1-216ENST00000531593 ATP6V1AP38606 617 aa22.33■■□□□ 1.17
GPAA1-216ENST00000531593 ITPK1Q13572 414 aa22.33■■□□□ 1.17
GPAA1-216ENST00000531593 GPR162Q16538 588 aa22.33■■□□□ 1.17
GPAA1-216ENST00000531593 MTHFSP49914 203 aa22.32■■□□□ 1.16
GPAA1-216ENST00000531593 C4BP0C0L5 1744 aa22.31■■□□□ 1.16
GPAA1-216ENST00000531593 FLAD1Q8NFF5 587 aa22.31■■□□□ 1.16
GPAA1-216ENST00000531593 RBM42Q9BTD8 480 aaKnown RBP22.31■■□□□ 1.16
GPAA1-216ENST00000531593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms