RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 NCAPD2Q15021 1401 aa22.12■■□□□ 1.13
RELA-216ENST00000531238 TATP17735 454 aaPredicted RBP22.11■■□□□ 1.13
RELA-216ENST00000531238 MTHFSP49914 203 aa22.11■■□□□ 1.13
RELA-216ENST00000531238 RAPGEF4Q8WZA2 1011 aa22.11■■□□□ 1.13
RELA-216ENST00000531238 SRCAPQ6ZRS2 3230 aa22.1■■□□□ 1.13
RELA-216ENST00000531238 SBF2Q86WG5 1849 aa22.1■■□□□ 1.13
RELA-216ENST00000531238 IL13P35225 146 aa22.08■■□□□ 1.13
RELA-216ENST00000531238 PROM2Q8N271 834 aa22.08■■□□□ 1.13
RELA-216ENST00000531238 IGSF1Q8N6C5 1336 aa22.06■■□□□ 1.12
RELA-216ENST00000531238 PLSCR1O15162 318 aa22.06■■□□□ 1.12
RELA-216ENST00000531238 CYP27B1O15528 508 aa22.06■■□□□ 1.12
RELA-216ENST00000531238 SHANK3Q9BYB0 1731 aa22.05■■□□□ 1.12
RELA-216ENST00000531238 ZEB1P37275 1124 aaPredicted RBP22.04■■□□□ 1.12
RELA-216ENST00000531238 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
RELA-216ENST00000531238 PRIM1P49642 420 aaKnown RBP22.03■■□□□ 1.12
RELA-216ENST00000531238 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
RELA-216ENST00000531238 PARD3Q8TEW0 1356 aa21.99■■□□□ 1.11
RELA-216ENST00000531238 PSDA5PKW4 1024 aaPredicted RBP21.99■■□□□ 1.11
RELA-216ENST00000531238 SULT6B1Q6IMI4 303 aa21.99■■□□□ 1.11
RELA-216ENST00000531238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.99■■□□□ 1.11
RELA-216ENST00000531238 PCDH11XQ9BZA7 1347 aa21.99■■□□□ 1.11
RELA-216ENST00000531238 PCDH11YQ9BZA8 1340 aa21.99■■□□□ 1.11
RELA-216ENST00000531238 PPP2R1AP30153 589 aa21.98■■□□□ 1.11
RELA-216ENST00000531238 SPG7Q9UQ90 795 aa21.98■■□□□ 1.11
RELA-216ENST00000531238 NHSQ6T4R5 1651 aa21.98■■□□□ 1.11
RELA-216ENST00000531238 NKX1-1Q15270 411 aaPredicted RBP21.97■■□□□ 1.11
RELA-216ENST00000531238 TXNRD1Q16881 649 aa21.97■■□□□ 1.11
RELA-216ENST00000531238 SYTL4Q96C24 671 aaPredicted RBP21.97■■□□□ 1.11
RELA-216ENST00000531238 DIAPH1O60610 1272 aaKnown RBP21.96■■□□□ 1.11
RELA-216ENST00000531238 R3HDM1Q15032 1099 aaKnown RBP21.96■■□□□ 1.11
RELA-216ENST00000531238 PHKG2P15735 406 aa21.95■■□□□ 1.1
RELA-216ENST00000531238 KAT6BQ8WYB5 2073 aa21.95■■□□□ 1.1
RELA-216ENST00000531238 COL3A1P02461 1466 aaPredicted RBP21.95■■□□□ 1.1
RELA-216ENST00000531238 HMOX1P09601 288 aa21.94■■□□□ 1.1
RELA-216ENST00000531238 KDRP35968 1356 aa21.94■■□□□ 1.1
RELA-216ENST00000531238 RREB1Q92766 1687 aa21.94■■□□□ 1.1
RELA-216ENST00000531238 PKD1L3Q7Z443 1732 aa21.94■■□□□ 1.1
RELA-216ENST00000531238 IFNL2Q8IZJ0 200 aa21.93■■□□□ 1.1
RELA-216ENST00000531238 PLEKHO1Q53GL0 409 aaPredicted RBP21.92■■□□□ 1.1
RELA-216ENST00000531238 ANO8Q9HCE9 1232 aaPredicted RBP21.92■■□□□ 1.1
RELA-216ENST00000531238 LRRC4BQ9NT99 713 aa21.92■■□□□ 1.1
RELA-216ENST00000531238 NUP188Q5SRE5 1749 aa21.92■■□□□ 1.1
RELA-216ENST00000531238 BTAF1O14981 1849 aa21.91■■□□□ 1.1
RELA-216ENST00000531238 DOT1LQ8TEK3 1739 aa21.9■■□□□ 1.1
RELA-216ENST00000531238 MPRIPQ6WCQ1 1025 aa21.9■■□□□ 1.1
RELA-216ENST00000531238 KCNQ4P56696 695 aa21.89■■□□□ 1.09
RELA-216ENST00000531238 AMOTQ4VCS5 1084 aa21.89■■□□□ 1.09
RELA-216ENST00000531238 NBPF14Q5TI25 921 aa21.89■■□□□ 1.09
RELA-216ENST00000531238 PIGBQ92521 554 aa21.89■■□□□ 1.09
RELA-216ENST00000531238 RGPD3A6NKT7 1758 aaPredicted RBP21.89■■□□□ 1.09
RELA-216ENST00000531238 RGPD4Q7Z3J3 1758 aa21.89■■□□□ 1.09
RELA-216ENST00000531238 PLEKHG2Q9H7P9 1386 aa21.88■■□□□ 1.09
RELA-216ENST00000531238 U2SURPO15042 1029 aaKnown RBP21.87■■□□□ 1.09
RELA-216ENST00000531238 ZNF530Q6P9A1 599 aaPredicted RBP21.87■■□□□ 1.09
RELA-216ENST00000531238 TOGARAM1Q9Y4F4 1720 aa21.86■■□□□ 1.09
RELA-216ENST00000531238 MTHFSDQ2M296 383 aaKnown RBP21.84■■□□□ 1.09
RELA-216ENST00000531238 CFAP53Q96M91 514 aa21.84■■□□□ 1.09
RELA-216ENST00000531238 PDGFDQ9GZP0 370 aaPredicted RBP21.84■■□□□ 1.09
RELA-216ENST00000531238 SLC15A2Q16348 729 aa21.82■■□□□ 1.08
RELA-216ENST00000531238 SLC27A3Q5K4L6 730 aa21.82■■□□□ 1.08
RELA-216ENST00000531238 DCAF5Q96JK2 942 aa21.82■■□□□ 1.08
RELA-216ENST00000531238 ASAP1Q9ULH1 1129 aa21.82■■□□□ 1.08
RELA-216ENST00000531238 KDM6AO15550 1401 aaPredicted RBP21.81■■□□□ 1.08
RELA-216ENST00000531238 ERVV-2B6SEH9 535 aa21.81■■□□□ 1.08
RELA-216ENST00000531238 ZNF827Q17R98 1081 aa21.81■■□□□ 1.08
RELA-216ENST00000531238 LGR6Q9HBX8 967 aa21.81■■□□□ 1.08
RELA-216ENST00000531238 ITGB4P16144 1822 aa21.8■■□□□ 1.08
RELA-216ENST00000531238 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
RELA-216ENST00000531238 RALBP1Q15311 655 aa21.8■■□□□ 1.08
RELA-216ENST00000531238 AKT1S1Q96B36 256 aa21.8■■□□□ 1.08
RELA-216ENST00000531238 PHACTR3Q96KR7 559 aa21.8■■□□□ 1.08
RELA-216ENST00000531238 RSPH6AQ9H0K4 717 aa21.8■■□□□ 1.08
RELA-216ENST00000531238 ATG3Q9NT62 314 aa21.8■■□□□ 1.08
RELA-216ENST00000531238 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
RELA-216ENST00000531238 AKAP4Q5JQC9 854 aa21.79■■□□□ 1.08
RELA-216ENST00000531238 C1orf141Q5JVX7 400 aa21.79■■□□□ 1.08
RELA-216ENST00000531238 STK32BQ9NY57 414 aa21.79■■□□□ 1.08
RELA-216ENST00000531238 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
RELA-216ENST00000531238 CCNL1Q9UK58 526 aaPredicted RBP21.78■■□□□ 1.08
RELA-216ENST00000531238 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
RELA-216ENST00000531238 PALLDQ8WX93 1383 aa21.77■■□□□ 1.08
RELA-216ENST00000531238 U2AF1L5P0DN76 240 aaPredicted RBP21.77■■□□□ 1.08
RELA-216ENST00000531238 U2AF1Q01081 240 aaKnown RBP eCLIP21.77■■□□□ 1.08
RELA-216ENST00000531238 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
RELA-216ENST00000531238 LY75O60449 1722 aa21.77■■□□□ 1.08
RELA-216ENST00000531238 PAPPAQ13219 1627 aa21.77■■□□□ 1.07
RELA-216ENST00000531238 PRKAR2BP31323 418 aa21.76■■□□□ 1.07
RELA-216ENST00000531238 CABP4P57796 275 aa21.75■■□□□ 1.07
RELA-216ENST00000531238 SMARCC1Q92922 1105 aaPredicted RBP21.75■■□□□ 1.07
RELA-216ENST00000531238 RNMTO43148 476 aaKnown RBP21.74■■□□□ 1.07
RELA-216ENST00000531238 SLC4A9Q96Q91 983 aa21.74■■□□□ 1.07
RELA-216ENST00000531238 FCHSD2O94868 740 aa21.73■■□□□ 1.07
RELA-216ENST00000531238 LOC102724428A0A0B4J2F2 783 aa21.72■■□□□ 1.07
RELA-216ENST00000531238 SIK1P57059 783 aa21.72■■□□□ 1.07
RELA-216ENST00000531238 IL17REQ8NFR9 667 aa21.72■■□□□ 1.07
RELA-216ENST00000531238 PRKRIP1Q9H875 184 aaPredicted RBP21.72■■□□□ 1.07
RELA-216ENST00000531238 ITPK1Q13572 414 aa21.71■■□□□ 1.07
RELA-216ENST00000531238 SLC52A2Q9HAB3 445 aa21.7■■□□□ 1.06
RELA-216ENST00000531238 MYBBP1AQ9BQG0 1328 aaKnown RBP21.7■■□□□ 1.06
RELA-216ENST00000531238 ZBTB7AO95365 584 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms