RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 FCHSD2O94868 740 aa22.57■■□□□ 1.2
SF3B2-211ENST00000531041 WDR43Q15061 677 aaKnown RBP eCLIP22.57■■□□□ 1.2
SF3B2-211ENST00000531041 PNISRQ8TF01 805 aaKnown RBP22.57■■□□□ 1.2
SF3B2-211ENST00000531041 TATP17735 454 aaPredicted RBP22.57■■□□□ 1.2
SF3B2-211ENST00000531041 RSPH6AQ9H0K4 717 aa22.57■■□□□ 1.2
SF3B2-211ENST00000531041 ADAMTS8Q9UP79 889 aa22.55■■□□□ 1.2
SF3B2-211ENST00000531041 SEPT12Q8IYM1 358 aa22.54■■□□□ 1.2
SF3B2-211ENST00000531041 RGS12O14924 1447 aa22.54■■□□□ 1.2
SF3B2-211ENST00000531041 TNS2Q63HR2 1409 aa22.54■■□□□ 1.2
SF3B2-211ENST00000531041 VIRMAQ69YN4 1812 aaKnown RBP22.53■■□□□ 1.2
SF3B2-211ENST00000531041 PNNQ9H307 717 aaKnown RBP22.53■■□□□ 1.2
SF3B2-211ENST00000531041 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.53■■□□□ 1.2
SF3B2-211ENST00000531041 A0A0G2JS52 829 aa22.52■■□□□ 1.2
SF3B2-211ENST00000531041 PRKAR2BP31323 418 aa22.52■■□□□ 1.2
SF3B2-211ENST00000531041 MYT1Q01538 1121 aa22.52■■□□□ 1.2
SF3B2-211ENST00000531041 DDB1Q16531 1140 aa22.52■■□□□ 1.2
SF3B2-211ENST00000531041 DLG5Q8TDM6 1919 aa22.52■■□□□ 1.2
SF3B2-211ENST00000531041 EXOC5O00471 708 aa22.51■■□□□ 1.19
SF3B2-211ENST00000531041 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
SF3B2-211ENST00000531041 PLEKHF1Q96S99 279 aa22.5■■□□□ 1.19
SF3B2-211ENST00000531041 AMOTQ4VCS5 1084 aa22.49■■□□□ 1.19
SF3B2-211ENST00000531041 PLEKHO1Q53GL0 409 aaPredicted RBP22.49■■□□□ 1.19
SF3B2-211ENST00000531041 SPG7Q9UQ90 795 aa22.49■■□□□ 1.19
SF3B2-211ENST00000531041 PHACTR3Q96KR7 559 aa22.47■■□□□ 1.19
SF3B2-211ENST00000531041 PCDH11XQ9BZA7 1347 aa22.46■■□□□ 1.19
SF3B2-211ENST00000531041 PCDH11YQ9BZA8 1340 aa22.46■■□□□ 1.19
SF3B2-211ENST00000531041 SBF2Q86WG5 1849 aa22.46■■□□□ 1.19
SF3B2-211ENST00000531041 KAT6BQ8WYB5 2073 aa22.46■■□□□ 1.19
SF3B2-211ENST00000531041 NEFMP07197 916 aa22.46■■□□□ 1.19
SF3B2-211ENST00000531041 PDE3BQ13370 1112 aa22.46■■□□□ 1.19
SF3B2-211ENST00000531041 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
SF3B2-211ENST00000531041 RUNDC1Q96C34 613 aa22.45■■□□□ 1.18
SF3B2-211ENST00000531041 SCN11AQ9UI33 1791 aa22.44■■□□□ 1.18
SF3B2-211ENST00000531041 MTHFSDQ2M296 383 aaKnown RBP22.44■■□□□ 1.18
SF3B2-211ENST00000531041 KRT27Q7Z3Y8 459 aa22.44■■□□□ 1.18
SF3B2-211ENST00000531041 MAPK8IP3Q9UPT6 1336 aa22.44■■□□□ 1.18
SF3B2-211ENST00000531041 CYP27B1O15528 508 aa22.43■■□□□ 1.18
SF3B2-211ENST00000531041 ZNF530Q6P9A1 599 aaPredicted RBP22.42■■□□□ 1.18
SF3B2-211ENST00000531041 CCDC146Q8IYE0 955 aa22.42■■□□□ 1.18
SF3B2-211ENST00000531041 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
SF3B2-211ENST00000531041 GAS2L2Q8NHY3 880 aa22.42■■□□□ 1.18
SF3B2-211ENST00000531041 DDX54Q8TDD1 881 aaKnown RBP22.42■■□□□ 1.18
SF3B2-211ENST00000531041 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
SF3B2-211ENST00000531041 PHKG2P15735 406 aa22.4■■□□□ 1.18
SF3B2-211ENST00000531041 ITGB4P16144 1822 aa22.4■■□□□ 1.18
SF3B2-211ENST00000531041 ADAMTS7Q9UKP4 1686 aa22.4■■□□□ 1.18
SF3B2-211ENST00000531041 DOT1LQ8TEK3 1739 aa22.39■■□□□ 1.18
SF3B2-211ENST00000531041 BCL9O00512 1426 aa22.39■■□□□ 1.18
SF3B2-211ENST00000531041 NKX1-1Q15270 411 aaPredicted RBP22.39■■□□□ 1.17
SF3B2-211ENST00000531041 AKAP4Q5JQC9 854 aa22.39■■□□□ 1.17
SF3B2-211ENST00000531041 C1orf141Q5JVX7 400 aa22.39■■□□□ 1.17
SF3B2-211ENST00000531041 TOGARAM1Q9Y4F4 1720 aa22.39■■□□□ 1.17
SF3B2-211ENST00000531041 NFE2L2Q16236 605 aa22.38■■□□□ 1.17
SF3B2-211ENST00000531041 HSP90AB1P08238 724 aaKnown RBP22.37■■□□□ 1.17
SF3B2-211ENST00000531041 TMPOP42166 694 aaKnown RBP22.36■■□□□ 1.17
SF3B2-211ENST00000531041 MAP3K5Q99683 1374 aa22.36■■□□□ 1.17
SF3B2-211ENST00000531041 GNAT3A8MTJ3 354 aa22.35■■□□□ 1.17
SF3B2-211ENST00000531041 APAF1O14727 1248 aa22.35■■□□□ 1.17
SF3B2-211ENST00000531041 FAM182BQ5T319 152 aa22.35■■□□□ 1.17
SF3B2-211ENST00000531041 NHSQ6T4R5 1651 aa22.35■■□□□ 1.17
SF3B2-211ENST00000531041 FAM196AQ6ZSG2 479 aa22.34■■□□□ 1.17
SF3B2-211ENST00000531041 SIPA1L3O60292 1781 aaPredicted RBP22.33■■□□□ 1.17
SF3B2-211ENST00000531041 DCAF5Q96JK2 942 aa22.33■■□□□ 1.17
SF3B2-211ENST00000531041 KDM6AO15550 1401 aaPredicted RBP22.33■■□□□ 1.16
SF3B2-211ENST00000531041 EP400Q96L91 3159 aa22.33■■□□□ 1.16
SF3B2-211ENST00000531041 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
SF3B2-211ENST00000531041 RIPK4P57078 832 aa22.31■■□□□ 1.16
SF3B2-211ENST00000531041 MPRIPQ6WCQ1 1025 aa22.31■■□□□ 1.16
SF3B2-211ENST00000531041 RRP7AQ9Y3A4 280 aaKnown RBP22.3■■□□□ 1.16
SF3B2-211ENST00000531041 BTAF1O14981 1849 aa22.29■■□□□ 1.16
SF3B2-211ENST00000531041 RNMTO43148 476 aaKnown RBP22.29■■□□□ 1.16
SF3B2-211ENST00000531041 NEUROD2Q15784 382 aa22.29■■□□□ 1.16
SF3B2-211ENST00000531041 NCBP3Q53F19 620 aaKnown RBP22.29■■□□□ 1.16
SF3B2-211ENST00000531041 IL17REQ8NFR9 667 aa22.29■■□□□ 1.16
SF3B2-211ENST00000531041 RTF1Q92541 710 aaKnown RBP22.29■■□□□ 1.16
SF3B2-211ENST00000531041 LGR6Q9HBX8 967 aa22.29■■□□□ 1.16
SF3B2-211ENST00000531041 CEMIPQ8WUJ3 1361 aa22.28■■□□□ 1.16
SF3B2-211ENST00000531041 ERVV-2B6SEH9 535 aa22.28■■□□□ 1.16
SF3B2-211ENST00000531041 LMOD3Q0VAK6 560 aa22.28■■□□□ 1.16
SF3B2-211ENST00000531041 ILDR2Q71H61 639 aa22.28■■□□□ 1.16
SF3B2-211ENST00000531041 MRC1P22897 1456 aa22.27■■□□□ 1.16
SF3B2-211ENST00000531041 TNS1Q9HBL0 1735 aaKnown RBP22.27■■□□□ 1.16
SF3B2-211ENST00000531041 NGEFQ8N5V2 710 aa22.27■■□□□ 1.16
SF3B2-211ENST00000531041 TRIM35Q9UPQ4 493 aa22.27■■□□□ 1.16
SF3B2-211ENST00000531041 PRIM1P49642 420 aaKnown RBP22.25■■□□□ 1.15
SF3B2-211ENST00000531041 MCM10Q7L590 875 aa22.25■■□□□ 1.15
SF3B2-211ENST00000531041 ACSBG1Q96GR2 724 aa22.25■■□□□ 1.15
SF3B2-211ENST00000531041 DCTN1Q14203 1278 aa22.24■■□□□ 1.15
SF3B2-211ENST00000531041 CCDC27Q2M243 656 aa22.24■■□□□ 1.15
SF3B2-211ENST00000531041 KCNQ2O43526 872 aa22.23■■□□□ 1.15
SF3B2-211ENST00000531041 CABP4P57796 275 aa22.23■■□□□ 1.15
SF3B2-211ENST00000531041 BCL11BQ9C0K0 894 aaPredicted RBP22.23■■□□□ 1.15
SF3B2-211ENST00000531041 SLC52A2Q9HAB3 445 aa22.23■■□□□ 1.15
SF3B2-211ENST00000531041 PAPPAQ13219 1627 aa22.22■■□□□ 1.15
SF3B2-211ENST00000531041 SENP3-EIF4A1A0A087X0R7 540 aa22.22■■□□□ 1.15
SF3B2-211ENST00000531041 TRIM37O94972 964 aa22.22■■□□□ 1.15
SF3B2-211ENST00000531041 TEFQ10587 303 aa22.22■■□□□ 1.15
SF3B2-211ENST00000531041 NFATC2IPQ8NCF5 419 aa22.22■■□□□ 1.15
SF3B2-211ENST00000531041 SYTL4Q96C24 671 aaPredicted RBP22.22■■□□□ 1.15
SF3B2-211ENST00000531041 TMOD3Q9NYL9 352 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms