RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 TATP17735 454 aaPredicted RBP22.93■■□□□ 1.26
SF3B2-209ENST00000530322 DDX54Q8TDD1 881 aaKnown RBP22.93■■□□□ 1.26
SF3B2-209ENST00000530322 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
SF3B2-209ENST00000530322 EZH2Q15910 746 aaKnown RBP22.92■■□□□ 1.26
SF3B2-209ENST00000530322 KAT6BQ8WYB5 2073 aa22.91■■□□□ 1.26
SF3B2-209ENST00000530322 PKD1L3Q7Z443 1732 aa22.91■■□□□ 1.26
SF3B2-209ENST00000530322 PARD3Q8TEW0 1356 aa22.91■■□□□ 1.26
SF3B2-209ENST00000530322 RREB1Q92766 1687 aa22.91■■□□□ 1.26
SF3B2-209ENST00000530322 RGPD3A6NKT7 1758 aaPredicted RBP22.91■■□□□ 1.26
SF3B2-209ENST00000530322 RGPD4Q7Z3J3 1758 aa22.91■■□□□ 1.26
SF3B2-209ENST00000530322 IGSF1Q8N6C5 1336 aa22.9■■□□□ 1.26
SF3B2-209ENST00000530322 KCNQ2O43526 872 aa22.9■■□□□ 1.26
SF3B2-209ENST00000530322 MTHFSP49914 203 aa22.9■■□□□ 1.26
SF3B2-209ENST00000530322 CNGB1Q14028 1251 aaPredicted RBP22.89■■□□□ 1.25
SF3B2-209ENST00000530322 ACSBG1Q96GR2 724 aa22.88■■□□□ 1.25
SF3B2-209ENST00000530322 PLSCR1O15162 318 aa22.87■■□□□ 1.25
SF3B2-209ENST00000530322 DOT1LQ8TEK3 1739 aa22.87■■□□□ 1.25
SF3B2-209ENST00000530322 PCDH11XQ9BZA7 1347 aa22.86■■□□□ 1.25
SF3B2-209ENST00000530322 PCDH11YQ9BZA8 1340 aa22.86■■□□□ 1.25
SF3B2-209ENST00000530322 NUP188Q5SRE5 1749 aa22.86■■□□□ 1.25
SF3B2-209ENST00000530322 IL13P35225 146 aa22.86■■□□□ 1.25
SF3B2-209ENST00000530322 BTAF1O14981 1849 aa22.86■■□□□ 1.25
SF3B2-209ENST00000530322 PLEKHG2Q9H7P9 1386 aa22.84■■□□□ 1.25
SF3B2-209ENST00000530322 CYP27B1O15528 508 aa22.83■■□□□ 1.25
SF3B2-209ENST00000530322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.83■■□□□ 1.251e-7■■□□□ 14
SF3B2-209ENST00000530322 SPG7Q9UQ90 795 aa22.82■■□□□ 1.24
SF3B2-209ENST00000530322 COL3A1P02461 1466 aaPredicted RBP22.8■■□□□ 1.24
SF3B2-209ENST00000530322 AEBP1Q8IUX7 1158 aa22.8■■□□□ 1.24
SF3B2-209ENST00000530322 KDRP35968 1356 aa22.79■■□□□ 1.24
SF3B2-209ENST00000530322 PRIM1P49642 420 aaKnown RBP22.79■■□□□ 1.24
SF3B2-209ENST00000530322 PROM2Q8N271 834 aa22.79■■□□□ 1.24
SF3B2-209ENST00000530322 DIAPH1O60610 1272 aaKnown RBP22.78■■□□□ 1.24
SF3B2-209ENST00000530322 SULT6B1Q6IMI4 303 aa22.78■■□□□ 1.24
SF3B2-209ENST00000530322 TOGARAM1Q9Y4F4 1720 aa22.78■■□□□ 1.24
SF3B2-209ENST00000530322 NKX1-1Q15270 411 aaPredicted RBP22.77■■□□□ 1.24
SF3B2-209ENST00000530322 SYTL4Q96C24 671 aaPredicted RBP22.77■■□□□ 1.24
SF3B2-209ENST00000530322 ITGB4P16144 1822 aa22.76■■□□□ 1.23
SF3B2-209ENST00000530322 PPP2R1AP30153 589 aa22.76■■□□□ 1.23
SF3B2-209ENST00000530322 DDX10Q13206 875 aaKnown RBP22.76■■□□□ 1.23
SF3B2-209ENST00000530322 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
SF3B2-209ENST00000530322 PSDA5PKW4 1024 aaPredicted RBP22.75■■□□□ 1.23
SF3B2-209ENST00000530322 PHKG2P15735 406 aa22.74■■□□□ 1.23
SF3B2-209ENST00000530322 IFNL2Q8IZJ0 200 aa22.74■■□□□ 1.23
SF3B2-209ENST00000530322 R3HDM1Q15032 1099 aaKnown RBP22.73■■□□□ 1.23
SF3B2-209ENST00000530322 PLEKHO1Q53GL0 409 aaPredicted RBP22.73■■□□□ 1.23
SF3B2-209ENST00000530322 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
SF3B2-209ENST00000530322 NBPF14Q5TI25 921 aa22.72■■□□□ 1.23
SF3B2-209ENST00000530322 LY75O60449 1722 aa22.71■■□□□ 1.23
SF3B2-209ENST00000530322 HMOX1P09601 288 aa22.71■■□□□ 1.23
SF3B2-209ENST00000530322 SRCAPQ6ZRS2 3230 aa22.7■■□□□ 1.22
SF3B2-209ENST00000530322 CFAP53Q96M91 514 aa22.7■■□□□ 1.22
SF3B2-209ENST00000530322 ZNF530Q6P9A1 599 aaPredicted RBP22.69■■□□□ 1.22
SF3B2-209ENST00000530322 ANO8Q9HCE9 1232 aaPredicted RBP22.69■■□□□ 1.22
SF3B2-209ENST00000530322 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
SF3B2-209ENST00000530322 U2SURPO15042 1029 aaKnown RBP22.67■■□□□ 1.22
SF3B2-209ENST00000530322 MPRIPQ6WCQ1 1025 aa22.67■■□□□ 1.22
SF3B2-209ENST00000530322 LRRC4BQ9NT99 713 aa22.67■■□□□ 1.22
SF3B2-209ENST00000530322 HSP90AB1P08238 724 aaKnown RBP22.65■■□□□ 1.22
SF3B2-209ENST00000530322 SLC27A3Q5K4L6 730 aa22.65■■□□□ 1.22
SF3B2-209ENST00000530322 PIGBQ92521 554 aa22.65■■□□□ 1.22
SF3B2-209ENST00000530322 DCAF5Q96JK2 942 aa22.65■■□□□ 1.22
SF3B2-209ENST00000530322 KDM6AO15550 1401 aaPredicted RBP22.65■■□□□ 1.22
SF3B2-209ENST00000530322 C1orf141Q5JVX7 400 aa22.64■■□□□ 1.21
SF3B2-209ENST00000530322 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
SF3B2-209ENST00000530322 RALBP1Q15311 655 aa22.62■■□□□ 1.21
SF3B2-209ENST00000530322 TMOD3Q9NYL9 352 aa22.62■■□□□ 1.21
SF3B2-209ENST00000530322 NUDCQ9Y266 331 aa22.62■■□□□ 1.21
SF3B2-209ENST00000530322 SCN11AQ9UI33 1791 aa22.62■■□□□ 1.21
SF3B2-209ENST00000530322 KCNQ4P56696 695 aa22.61■■□□□ 1.21
SF3B2-209ENST00000530322 SLC15A2Q16348 729 aa22.61■■□□□ 1.21
SF3B2-209ENST00000530322 STK32BQ9NY57 414 aa22.61■■□□□ 1.21
SF3B2-209ENST00000530322 VIRMAQ69YN4 1812 aaKnown RBP22.61■■□□□ 1.21
SF3B2-209ENST00000530322 PALLDQ8WX93 1383 aa22.61■■□□□ 1.21
SF3B2-209ENST00000530322 LRP5O75197 1615 aa22.6■■□□□ 1.21
SF3B2-209ENST00000530322 MTHFSDQ2M296 383 aaKnown RBP22.6■■□□□ 1.21
SF3B2-209ENST00000530322 AKAP4Q5JQC9 854 aa22.6■■□□□ 1.21
SF3B2-209ENST00000530322 SMARCC1Q92922 1105 aaPredicted RBP22.6■■□□□ 1.21
SF3B2-209ENST00000530322 CASZ1Q86V15 1759 aa22.6■■□□□ 1.21
SF3B2-209ENST00000530322 RSPH6AQ9H0K4 717 aa22.59■■□□□ 1.21
SF3B2-209ENST00000530322 CCNL1Q9UK58 526 aaPredicted RBP22.59■■□□□ 1.21
SF3B2-209ENST00000530322 TAF1LQ8IZX4 1826 aa22.59■■□□□ 1.21
SF3B2-209ENST00000530322 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
SF3B2-209ENST00000530322 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.28e-8■□□□□ 11.2
SF3B2-209ENST00000530322 ZNF827Q17R98 1081 aa22.57■■□□□ 1.2
SF3B2-209ENST00000530322 AKT1S1Q96B36 256 aa22.57■■□□□ 1.2
SF3B2-209ENST00000530322 ASAP1Q9ULH1 1129 aa22.57■■□□□ 1.2
SF3B2-209ENST00000530322 C5P01031 1676 aa22.56■■□□□ 1.2
SF3B2-209ENST00000530322 ADAMTS7Q9UKP4 1686 aa22.56■■□□□ 1.2
SF3B2-209ENST00000530322 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
SF3B2-209ENST00000530322 PRKAR2BP31323 418 aa22.56■■□□□ 1.2
SF3B2-209ENST00000530322 CABP4P57796 275 aa22.56■■□□□ 1.2
SF3B2-209ENST00000530322 QSER1Q2KHR3 1735 aa22.55■■□□□ 1.2
SF3B2-209ENST00000530322 PDGFDQ9GZP0 370 aaPredicted RBP22.55■■□□□ 1.2
SF3B2-209ENST00000530322 ATG3Q9NT62 314 aa22.55■■□□□ 1.2
SF3B2-209ENST00000530322 TUBGCP6Q96RT7 1819 aa22.54■■□□□ 1.2
SF3B2-209ENST00000530322 FCHSD2O94868 740 aa22.54■■□□□ 1.2
SF3B2-209ENST00000530322 LGR6Q9HBX8 967 aa22.54■■□□□ 1.2
SF3B2-209ENST00000530322 MYBBP1AQ9BQG0 1328 aaKnown RBP22.54■■□□□ 1.2
SF3B2-209ENST00000530322 RNMTO43148 476 aaKnown RBP22.53■■□□□ 1.2
SF3B2-209ENST00000530322 GAS2L2Q8NHY3 880 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms