RNA–Protein interactions for RNA: ENST00000530310.1

NR1H3-232, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-232ENST00000530310 MEGF6O75095 1541 aa20.39■□□□□ 0.85
NR1H3-232ENST00000530310 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.85
NR1H3-232ENST00000530310 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
NR1H3-232ENST00000530310 RGPD2P0DJD1 1756 aa20.39■□□□□ 0.85
NR1H3-232ENST00000530310 SMG6Q86US8 1419 aaKnown RBP20.38■□□□□ 0.85
NR1H3-232ENST00000530310 NBPF6Q5VWK0 638 aa20.38■□□□□ 0.85
NR1H3-232ENST00000530310 NBPF4Q96M43 638 aa20.38■□□□□ 0.85
NR1H3-232ENST00000530310 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
NR1H3-232ENST00000530310 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
NR1H3-232ENST00000530310 SGIP1Q9BQI5 828 aa20.36■□□□□ 0.85
NR1H3-232ENST00000530310 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
NR1H3-232ENST00000530310 KCNQ4P56696 695 aa20.35■□□□□ 0.85
NR1H3-232ENST00000530310 RAPGEF4Q8WZA2 1011 aa20.35■□□□□ 0.85
NR1H3-232ENST00000530310 SYT17Q9BSW7 474 aa20.35■□□□□ 0.85
NR1H3-232ENST00000530310 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
NR1H3-232ENST00000530310 AKT1S1Q96B36 256 aa20.34■□□□□ 0.85
NR1H3-232ENST00000530310 ARXQ96QS3 562 aa20.34■□□□□ 0.85
NR1H3-232ENST00000530310 KIF20BQ96Q89 1820 aa20.34■□□□□ 0.85
NR1H3-232ENST00000530310 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.85
NR1H3-232ENST00000530310 TATP17735 454 aaPredicted RBP20.33■□□□□ 0.85
NR1H3-232ENST00000530310 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.85
NR1H3-232ENST00000530310 NSD3Q9BZ95 1437 aa20.33■□□□□ 0.84
NR1H3-232ENST00000530310 NSD2O96028 1365 aa20.33■□□□□ 0.84
NR1H3-232ENST00000530310 INSRP06213 1382 aa20.33■□□□□ 0.84
NR1H3-232ENST00000530310 FLT4P35916 1363 aa20.33■□□□□ 0.84
NR1H3-232ENST00000530310 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
NR1H3-232ENST00000530310 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
NR1H3-232ENST00000530310 TFCP2L1Q9NZI6 479 aa20.31■□□□□ 0.84
NR1H3-232ENST00000530310 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
NR1H3-232ENST00000530310 PNPLA7Q6ZV29 1317 aa20.29■□□□□ 0.84
NR1H3-232ENST00000530310 KLHL34Q8N239 644 aa20.29■□□□□ 0.84
NR1H3-232ENST00000530310 SLC16A10Q8TF71 515 aa20.29■□□□□ 0.84
NR1H3-232ENST00000530310 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
NR1H3-232ENST00000530310 KIF24Q5T7B8 1368 aa20.29■□□□□ 0.84
NR1H3-232ENST00000530310 PPM1GO15355 546 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-232ENST00000530310 POLD1P28340 1107 aa20.28■□□□□ 0.84
NR1H3-232ENST00000530310 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
NR1H3-232ENST00000530310 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
NR1H3-232ENST00000530310 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
NR1H3-232ENST00000530310 LY75O60449 1722 aa20.27■□□□□ 0.83
NR1H3-232ENST00000530310 QSER1Q2KHR3 1735 aa20.25■□□□□ 0.83
NR1H3-232ENST00000530310 MSH5O43196 834 aa20.25■□□□□ 0.83
NR1H3-232ENST00000530310 MAP3K5Q99683 1374 aa20.24■□□□□ 0.83
NR1H3-232ENST00000530310 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
NR1H3-232ENST00000530310 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
NR1H3-232ENST00000530310 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
NR1H3-232ENST00000530310 CYP27B1O15528 508 aa20.22■□□□□ 0.83
NR1H3-232ENST00000530310 PALLDQ8WX93 1383 aa20.21■□□□□ 0.83
NR1H3-232ENST00000530310 GPR162Q16538 588 aa20.2■□□□□ 0.82
NR1H3-232ENST00000530310 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
NR1H3-232ENST00000530310 PELP1Q8IZL8 1130 aaKnown RBP20.19■□□□□ 0.82
NR1H3-232ENST00000530310 WASHC2AQ641Q2 1341 aa20.19■□□□□ 0.82
NR1H3-232ENST00000530310 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
NR1H3-232ENST00000530310 TNNT2P45379 298 aaPredicted RBP20.17■□□□□ 0.82
NR1H3-232ENST00000530310 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
NR1H3-232ENST00000530310 ZNF784Q8NCA9 323 aaPredicted RBP20.17■□□□□ 0.82
NR1H3-232ENST00000530310 EYA1Q99502 592 aa20.17■□□□□ 0.82
NR1H3-232ENST00000530310 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
NR1H3-232ENST00000530310 COL24A1Q17RW2 1714 aa20.16■□□□□ 0.82
NR1H3-232ENST00000530310 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
NR1H3-232ENST00000530310 SMARCC1Q92922 1105 aaPredicted RBP20.16■□□□□ 0.82
NR1H3-232ENST00000530310 NCAPD2Q15021 1401 aa20.16■□□□□ 0.82
NR1H3-232ENST00000530310 C5P01031 1676 aa20.16■□□□□ 0.82
NR1H3-232ENST00000530310 ANKRD26Q9UPS8 1709 aa20.16■□□□□ 0.82
NR1H3-232ENST00000530310 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
NR1H3-232ENST00000530310 HMGB2P26583 209 aaKnown RBP20.15■□□□□ 0.82
NR1H3-232ENST00000530310 NLGN2Q8NFZ4 835 aa20.15■□□□□ 0.82
NR1H3-232ENST00000530310 PIGBQ92521 554 aa20.14■□□□□ 0.81
NR1H3-232ENST00000530310 HSPA5P11021 654 aaKnown RBP20.13■□□□□ 0.81
NR1H3-232ENST00000530310 NKX1-1Q15270 411 aaPredicted RBP20.13■□□□□ 0.81
NR1H3-232ENST00000530310 FLAD1Q8NFF5 587 aa20.13■□□□□ 0.81
NR1H3-232ENST00000530310 AK7Q96M32 723 aa20.13■□□□□ 0.81
NR1H3-232ENST00000530310 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
NR1H3-232ENST00000530310 ITGB4P16144 1822 aa20.11■□□□□ 0.81
NR1H3-232ENST00000530310 EIF4A2Q14240 407 aaKnown RBP20.11■□□□□ 0.81
NR1H3-232ENST00000530310 PANK3Q9H999 370 aa20.11■□□□□ 0.81
NR1H3-232ENST00000530310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.11■□□□□ 0.81
NR1H3-232ENST00000530310 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
NR1H3-232ENST00000530310 CHD4Q14839 1912 aa20.1■□□□□ 0.81
NR1H3-232ENST00000530310 IFNL2Q8IZJ0 200 aa20.1■□□□□ 0.81
NR1H3-232ENST00000530310 PHF14O94880 888 aa20.09■□□□□ 0.81
NR1H3-232ENST00000530310 PHKG2P15735 406 aa20.09■□□□□ 0.81
NR1H3-232ENST00000530310 C4BP0C0L5 1744 aa20.09■□□□□ 0.81
NR1H3-232ENST00000530310 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
NR1H3-232ENST00000530310 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.81
NR1H3-232ENST00000530310 SIK1P57059 783 aa20.08■□□□□ 0.81
NR1H3-232ENST00000530310 SMIM5Q71RC9 77 aa20.07■□□□□ 0.8
NR1H3-232ENST00000530310 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
NR1H3-232ENST00000530310 LINC00116Q8NCU8 138 aa20.06■□□□□ 0.8
NR1H3-232ENST00000530310 ASAP1Q9ULH1 1129 aa20.06■□□□□ 0.8
NR1H3-232ENST00000530310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
NR1H3-232ENST00000530310 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
NR1H3-232ENST00000530310 IGSF1Q8N6C5 1336 aa20.04■□□□□ 0.8
NR1H3-232ENST00000530310 ATP6V1AP38606 617 aa20.04■□□□□ 0.8
NR1H3-232ENST00000530310 GRIN3BO60391 1043 aa20.03■□□□□ 0.8
NR1H3-232ENST00000530310 ITPK1Q13572 414 aa20.03■□□□□ 0.8
NR1H3-232ENST00000530310 MORC1Q86VD1 984 aa20.03■□□□□ 0.8
NR1H3-232ENST00000530310 ATG3Q9NT62 314 aa20.03■□□□□ 0.8
NR1H3-232ENST00000530310 CD2APQ9Y5K6 639 aa20.03■□□□□ 0.8
NR1H3-232ENST00000530310 GNPATO15228 680 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms