RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 SENP3-EIF4A1A0A087X0R7 540 aa21.24■□□□□ 0.99
CCDC90B-215ENST00000529745 UTRNP46939 3433 aa21.24■□□□□ 0.99
CCDC90B-215ENST00000529745 PKD1L3Q7Z443 1732 aa21.24■□□□□ 0.99
CCDC90B-215ENST00000529745 PLSCR1O15162 318 aa21.23■□□□□ 0.99
CCDC90B-215ENST00000529745 NBPF6Q5VWK0 638 aa21.23■□□□□ 0.99
CCDC90B-215ENST00000529745 NBPF4Q96M43 638 aa21.23■□□□□ 0.99
CCDC90B-215ENST00000529745 POLKQ9UBT6 870 aa21.23■□□□□ 0.99
CCDC90B-215ENST00000529745 PPP1R1BQ9UD71 204 aaPredicted RBP21.23■□□□□ 0.99
CCDC90B-215ENST00000529745 ZNF784Q8NCA9 323 aaPredicted RBP21.22■□□□□ 0.99
CCDC90B-215ENST00000529745 BTAF1O14981 1849 aa21.22■□□□□ 0.99
CCDC90B-215ENST00000529745 SPON1Q9HCB6 807 aa21.21■□□□□ 0.99
CCDC90B-215ENST00000529745 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
CCDC90B-215ENST00000529745 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
CCDC90B-215ENST00000529745 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
CCDC90B-215ENST00000529745 AMER1Q5JTC6 1135 aaPredicted RBP21.19■□□□□ 0.98
CCDC90B-215ENST00000529745 PLEKHG2Q9H7P9 1386 aa21.18■□□□□ 0.98
CCDC90B-215ENST00000529745 KCNQ2O43526 872 aa21.17■□□□□ 0.98
CCDC90B-215ENST00000529745 NPC1L1Q9UHC9 1359 aa21.17■□□□□ 0.98
CCDC90B-215ENST00000529745 NBPF14Q5TI25 921 aa21.16■□□□□ 0.98
CCDC90B-215ENST00000529745 PTF1AQ7RTS3 328 aa21.16■□□□□ 0.98
CCDC90B-215ENST00000529745 ZCRB1Q8TBF4 217 aaKnown RBP21.16■□□□□ 0.98
CCDC90B-215ENST00000529745 RAPGEF4Q8WZA2 1011 aa21.15■□□□□ 0.98
CCDC90B-215ENST00000529745 KAT6BQ8WYB5 2073 aa21.15■□□□□ 0.98
CCDC90B-215ENST00000529745 C1QTNF8P60827 252 aa21.14■□□□□ 0.97
CCDC90B-215ENST00000529745 MORC1Q86VD1 984 aa21.14■□□□□ 0.97
CCDC90B-215ENST00000529745 USHBP1Q8N6Y0 703 aa21.14■□□□□ 0.97
CCDC90B-215ENST00000529745 CEP350Q5VT06 3117 aa21.14■□□□□ 0.97
CCDC90B-215ENST00000529745 PPM1GO15355 546 aaPredicted RBP21.13■□□□□ 0.97
CCDC90B-215ENST00000529745 TATP17735 454 aaPredicted RBP21.13■□□□□ 0.97
CCDC90B-215ENST00000529745 CHD4Q14839 1912 aa21.13■□□□□ 0.97
CCDC90B-215ENST00000529745 LY75O60449 1722 aa21.12■□□□□ 0.97
CCDC90B-215ENST00000529745 EYA1Q99502 592 aa21.12■□□□□ 0.97
CCDC90B-215ENST00000529745 TNNT2P45379 298 aaPredicted RBP21.11■□□□□ 0.97
CCDC90B-215ENST00000529745 EIF4A2Q14240 407 aaKnown RBP21.11■□□□□ 0.97
CCDC90B-215ENST00000529745 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
CCDC90B-215ENST00000529745 PAPPAQ13219 1627 aa21.11■□□□□ 0.97
CCDC90B-215ENST00000529745 PROM2Q8N271 834 aa21.1■□□□□ 0.97
CCDC90B-215ENST00000529745 ITGB4P16144 1822 aa21.1■□□□□ 0.97
CCDC90B-215ENST00000529745 TOGARAM1Q9Y4F4 1720 aa21.09■□□□□ 0.97
CCDC90B-215ENST00000529745 IGSF1Q8N6C5 1336 aa21.09■□□□□ 0.97
CCDC90B-215ENST00000529745 PCDH11XQ9BZA7 1347 aa21.09■□□□□ 0.97
CCDC90B-215ENST00000529745 PCDH11YQ9BZA8 1340 aa21.09■□□□□ 0.97
CCDC90B-215ENST00000529745 ACSBG1Q96GR2 724 aa21.09■□□□□ 0.97
CCDC90B-215ENST00000529745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.09■□□□□ 0.97
CCDC90B-215ENST00000529745 CASZ1Q86V15 1759 aa21.07■□□□□ 0.96
CCDC90B-215ENST00000529745 TXNRD1Q16881 649 aa21.06■□□□□ 0.96
CCDC90B-215ENST00000529745 QSER1Q2KHR3 1735 aa21.06■□□□□ 0.96
CCDC90B-215ENST00000529745 CYP27B1O15528 508 aa21.04■□□□□ 0.96
CCDC90B-215ENST00000529745 KDRP35968 1356 aa21.03■□□□□ 0.96
CCDC90B-215ENST00000529745 NKX1-1Q15270 411 aaPredicted RBP21.03■□□□□ 0.96
CCDC90B-215ENST00000529745 SPG7Q9UQ90 795 aa21.03■□□□□ 0.96
CCDC90B-215ENST00000529745 PRIM1P49642 420 aaKnown RBP21.02■□□□□ 0.96
CCDC90B-215ENST00000529745 ANO8Q9HCE9 1232 aaPredicted RBP21.01■□□□□ 0.95
CCDC90B-215ENST00000529745 IL13P35225 146 aa21■□□□□ 0.95
CCDC90B-215ENST00000529745 MTHFSP49914 203 aa20.99■□□□□ 0.95
CCDC90B-215ENST00000529745 SLC27A3Q5K4L6 730 aa20.99■□□□□ 0.95
CCDC90B-215ENST00000529745 CC2D1BQ5T0F9 858 aaKnown RBP20.99■□□□□ 0.95
CCDC90B-215ENST00000529745 COL3A1P02461 1466 aaPredicted RBP20.99■□□□□ 0.95
CCDC90B-215ENST00000529745 TAF1LQ8IZX4 1826 aa20.98■□□□□ 0.95
CCDC90B-215ENST00000529745 TUBGCP6Q96RT7 1819 aa20.97■□□□□ 0.95
CCDC90B-215ENST00000529745 PHKG2P15735 406 aa20.96■□□□□ 0.95
CCDC90B-215ENST00000529745 SLC15A2Q16348 729 aa20.96■□□□□ 0.95
CCDC90B-215ENST00000529745 IFNL2Q8IZJ0 200 aa20.96■□□□□ 0.95
CCDC90B-215ENST00000529745 SYTL4Q96C24 671 aaPredicted RBP20.96■□□□□ 0.95
CCDC90B-215ENST00000529745 C5P01031 1676 aa20.96■□□□□ 0.95
CCDC90B-215ENST00000529745 LRRC4BQ9NT99 713 aa20.95■□□□□ 0.94
CCDC90B-215ENST00000529745 VIRMAQ69YN4 1812 aaKnown RBP20.94■□□□□ 0.94
CCDC90B-215ENST00000529745 AMOTQ4VCS5 1084 aa20.94■□□□□ 0.94
CCDC90B-215ENST00000529745 STK32BQ9NY57 414 aa20.94■□□□□ 0.94
CCDC90B-215ENST00000529745 ZNF831Q5JPB2 1677 aa20.93■□□□□ 0.94
CCDC90B-215ENST00000529745 COL24A1Q17RW2 1714 aa20.93■□□□□ 0.94
CCDC90B-215ENST00000529745 SCN11AQ9UI33 1791 aa20.93■□□□□ 0.94
CCDC90B-215ENST00000529745 PTGER2P43116 358 aa20.93■□□□□ 0.94
CCDC90B-215ENST00000529745 PDGFDQ9GZP0 370 aaPredicted RBP20.93■□□□□ 0.94
CCDC90B-215ENST00000529745 PLEKHO1Q53GL0 409 aaPredicted RBP20.92■□□□□ 0.94
CCDC90B-215ENST00000529745 SULT6B1Q6IMI4 303 aa20.91■□□□□ 0.94
CCDC90B-215ENST00000529745 AEBP1Q8IUX7 1158 aa20.91■□□□□ 0.94
CCDC90B-215ENST00000529745 SYT17Q9BSW7 474 aa20.91■□□□□ 0.94
CCDC90B-215ENST00000529745 ADAMTS7Q9UKP4 1686 aa20.9■□□□□ 0.94
CCDC90B-215ENST00000529745 DIAPH1O60610 1272 aaKnown RBP20.9■□□□□ 0.94
CCDC90B-215ENST00000529745 ZBTB7AO95365 584 aa20.9■□□□□ 0.94
CCDC90B-215ENST00000529745 HSP90AB1P08238 724 aaKnown RBP20.9■□□□□ 0.94
CCDC90B-215ENST00000529745 HMGB2P26583 209 aaKnown RBP20.9■□□□□ 0.94
CCDC90B-215ENST00000529745 AKT1S1Q96B36 256 aa20.9■□□□□ 0.94
CCDC90B-215ENST00000529745 FHDC1Q9C0D6 1143 aaPredicted RBP20.9■□□□□ 0.94
CCDC90B-215ENST00000529745 PALLDQ8WX93 1383 aa20.88■□□□□ 0.93
CCDC90B-215ENST00000529745 GIGYF1O75420 1035 aaPredicted RBP20.88■□□□□ 0.93
CCDC90B-215ENST00000529745 MPRIPQ6WCQ1 1025 aa20.88■□□□□ 0.93
CCDC90B-215ENST00000529745 PIGBQ92521 554 aa20.88■□□□□ 0.93
CCDC90B-215ENST00000529745 SMARCC1Q92922 1105 aaPredicted RBP20.88■□□□□ 0.93
CCDC90B-215ENST00000529745 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
CCDC90B-215ENST00000529745 ERVV-2B6SEH9 535 aa20.87■□□□□ 0.93
CCDC90B-215ENST00000529745 ZNF827Q17R98 1081 aa20.87■□□□□ 0.93
CCDC90B-215ENST00000529745 DCAF5Q96JK2 942 aa20.87■□□□□ 0.93
CCDC90B-215ENST00000529745 CCNL1Q9UK58 526 aaPredicted RBP20.86■□□□□ 0.93
CCDC90B-215ENST00000529745 ATF5Q9Y2D1 282 aaPredicted RBP20.86■□□□□ 0.93
CCDC90B-215ENST00000529745 C4BP0C0L5 1744 aa20.85■□□□□ 0.93
CCDC90B-215ENST00000529745 ZNF530Q6P9A1 599 aaPredicted RBP20.85■□□□□ 0.93
CCDC90B-215ENST00000529745 TMOD3Q9NYL9 352 aa20.85■□□□□ 0.93
CCDC90B-215ENST00000529745 GOLGB1Q14789 3259 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms