RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 RTL5Q5HYW3 569 aaPredicted RBP13.46□□□□□ -0.25
PUF60-213ENST00000528999 ABTB2Q8N961 1025 aa13.46□□□□□ -0.25
PUF60-213ENST00000528999 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
PUF60-213ENST00000528999 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
PUF60-213ENST00000528999 CHD1LQ86WJ1 897 aa13.45□□□□□ -0.26
PUF60-213ENST00000528999 RPAP2Q8IXW5 612 aaPredicted RBP13.45□□□□□ -0.26
PUF60-213ENST00000528999 TBC1D32Q96NH3 1257 aa13.45□□□□□ -0.26
PUF60-213ENST00000528999 PIK3C2AO00443 1686 aa13.44□□□□□ -0.26
PUF60-213ENST00000528999 DCTN1Q14203 1278 aa13.44□□□□□ -0.26
PUF60-213ENST00000528999 IP6K1Q92551 441 aa13.44□□□□□ -0.26
PUF60-213ENST00000528999 ADGRL3Q9HAR2 1447 aa13.44□□□□□ -0.26
PUF60-213ENST00000528999 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
PUF60-213ENST00000528999 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
PUF60-213ENST00000528999 NPHP4O75161 1426 aaPredicted RBP13.43□□□□□ -0.26
PUF60-213ENST00000528999 BMP2KLQ5H9B9 411 aa13.42□□□□□ -0.26
PUF60-213ENST00000528999 MCM10Q7L590 875 aa13.42□□□□□ -0.26
PUF60-213ENST00000528999 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
PUF60-213ENST00000528999 PSME1Q06323 249 aa13.41□□□□□ -0.26
PUF60-213ENST00000528999 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
PUF60-213ENST00000528999 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
PUF60-213ENST00000528999 RGPD8O14715 1765 aaPredicted RBP13.4□□□□□ -0.26
PUF60-213ENST00000528999 SEC24BO95487 1268 aa13.4□□□□□ -0.26
PUF60-213ENST00000528999 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
PUF60-213ENST00000528999 TAF7Q15545 349 aaPredicted RBP13.39□□□□□ -0.27
PUF60-213ENST00000528999 CCDC30Q5VVM6 783 aa13.39□□□□□ -0.27
PUF60-213ENST00000528999 MST1RQ04912 1400 aa13.39□□□□□ -0.27
PUF60-213ENST00000528999 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
PUF60-213ENST00000528999 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
PUF60-213ENST00000528999 ANKRD45Q5TZF3 282 aa13.38□□□□□ -0.27
PUF60-213ENST00000528999 SIRT2Q8IXJ6 389 aa13.38□□□□□ -0.27
PUF60-213ENST00000528999 STK31Q9BXU1 1019 aa13.38□□□□□ -0.27
PUF60-213ENST00000528999 PHRF1Q9P1Y6 1649 aaKnown RBP13.38□□□□□ -0.27
PUF60-213ENST00000528999 NCOA3Q9Y6Q9 1424 aa13.38□□□□□ -0.27
PUF60-213ENST00000528999 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
PUF60-213ENST00000528999 SOX12O15370 315 aa13.37□□□□□ -0.27
PUF60-213ENST00000528999 HMMRO75330 724 aa13.37□□□□□ -0.27
PUF60-213ENST00000528999 HOXB7P09629 217 aa13.37□□□□□ -0.27
PUF60-213ENST00000528999 NBR1Q14596 966 aa13.37□□□□□ -0.27
PUF60-213ENST00000528999 AMOTQ4VCS5 1084 aa13.37□□□□□ -0.27
PUF60-213ENST00000528999 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
PUF60-213ENST00000528999 RGS12O14924 1447 aa13.37□□□□□ -0.27
PUF60-213ENST00000528999 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
PUF60-213ENST00000528999 RBM25P49756 843 aaKnown RBP13.36□□□□□ -0.27
PUF60-213ENST00000528999 ESCO1Q5FWF5 840 aa13.36□□□□□ -0.27
PUF60-213ENST00000528999 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
PUF60-213ENST00000528999 NFAT5O94916 1531 aa13.35□□□□□ -0.27
PUF60-213ENST00000528999 FOXO3O43524 673 aa13.35□□□□□ -0.27
PUF60-213ENST00000528999 LRRC37A3O60309 1634 aa13.35□□□□□ -0.27
PUF60-213ENST00000528999 CEMIPQ8WUJ3 1361 aa13.34□□□□□ -0.27
PUF60-213ENST00000528999 GNAI3P08754 354 aa13.34□□□□□ -0.27
PUF60-213ENST00000528999 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
PUF60-213ENST00000528999 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
PUF60-213ENST00000528999 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
PUF60-213ENST00000528999 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.27
PUF60-213ENST00000528999 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
PUF60-213ENST00000528999 CEP85Q6P2H3 762 aa13.33□□□□□ -0.28
PUF60-213ENST00000528999 ARHGEF25Q86VW2 580 aa13.33□□□□□ -0.28
PUF60-213ENST00000528999 OVOS2A0A0G2JMS6 1433 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 GCP02774 474 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 DEKP35659 375 aaKnown RBP13.32□□□□□ -0.28
PUF60-213ENST00000528999 KRT24Q2M2I5 525 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 NUTM2GQ5VZR2 741 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 PROSER2Q86WR7 435 aaPredicted RBP13.32□□□□□ -0.28
PUF60-213ENST00000528999 SNX21Q969T3 373 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 SLIT3O75094 1523 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 MSH6P52701 1360 aa13.32□□□□□ -0.28
PUF60-213ENST00000528999 LMTK3Q96Q04 1460 aa13.31□□□□□ -0.28
PUF60-213ENST00000528999 GNAI2P04899 355 aa13.31□□□□□ -0.28
PUF60-213ENST00000528999 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
PUF60-213ENST00000528999 NFKBIBQ15653 356 aa13.31□□□□□ -0.28
PUF60-213ENST00000528999 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
PUF60-213ENST00000528999 PXDNLA1KZ92 1463 aa13.3□□□□□ -0.28
PUF60-213ENST00000528999 CDC45O75419 566 aa13.3□□□□□ -0.28
PUF60-213ENST00000528999 NBPF6Q5VWK0 638 aa13.3□□□□□ -0.28
PUF60-213ENST00000528999 PLEKHM2Q8IWE5 1019 aa13.3□□□□□ -0.28
PUF60-213ENST00000528999 NBPF4Q96M43 638 aa13.3□□□□□ -0.28
PUF60-213ENST00000528999 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
PUF60-213ENST00000528999 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
PUF60-213ENST00000528999 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
PUF60-213ENST00000528999 KIF1AQ12756 1690 aa13.29□□□□□ -0.28
PUF60-213ENST00000528999 MFAP1P55081 439 aaKnown RBP13.29□□□□□ -0.28
PUF60-213ENST00000528999 FLIIQ13045 1269 aa13.29□□□□□ -0.28
PUF60-213ENST00000528999 KRT28Q7Z3Y7 464 aa13.29□□□□□ -0.28
PUF60-213ENST00000528999 LTV1Q96GA3 475 aaPredicted RBP13.29□□□□□ -0.28
PUF60-213ENST00000528999 TBC1D2Q9BYX2 928 aa13.29□□□□□ -0.28
PUF60-213ENST00000528999 OSBPL3Q9H4L5 887 aa13.29□□□□□ -0.28
PUF60-213ENST00000528999 DCCP43146 1447 aa13.29□□□□□ -0.28
PUF60-213ENST00000528999 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
PUF60-213ENST00000528999 ANTXR1Q9H6X2 564 aa13.28□□□□□ -0.28
PUF60-213ENST00000528999 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
PUF60-213ENST00000528999 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
PUF60-213ENST00000528999 ATP8B2P98198 1209 aa13.27□□□□□ -0.29
PUF60-213ENST00000528999 TTC22Q5TAA0 569 aa13.27□□□□□ -0.29
PUF60-213ENST00000528999 CASC1Q6TDU7 716 aa13.27□□□□□ -0.29
PUF60-213ENST00000528999 G2E3Q7L622 706 aa13.27□□□□□ -0.29
PUF60-213ENST00000528999 MEIS3Q99687 375 aa13.27□□□□□ -0.29
PUF60-213ENST00000528999 C1orf167Q5SNV9 1468 aa13.27□□□□□ -0.29
PUF60-213ENST00000528999 MED1Q15648 1581 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms