RNA–Protein interactions for RNA: ENST00000528780.5

IFITM1-204, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene IFITM1, Length 730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-204ENST00000528780 NEFMP07197 916 aa19.57■□□□□ 0.72
IFITM1-204ENST00000528780 IL2RBP14784 551 aa19.57■□□□□ 0.72
IFITM1-204ENST00000528780 RAPGEF4Q8WZA2 1011 aa19.57■□□□□ 0.72
IFITM1-204ENST00000528780 TATP17735 454 aaPredicted RBP19.56■□□□□ 0.72
IFITM1-204ENST00000528780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.56■□□□□ 0.72
IFITM1-204ENST00000528780 SCN11AQ9UI33 1791 aa19.56■□□□□ 0.72
IFITM1-204ENST00000528780 BRWD3Q6RI45 1802 aa19.55■□□□□ 0.72
IFITM1-204ENST00000528780 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
IFITM1-204ENST00000528780 GJD4Q96KN9 370 aaPredicted RBP19.55■□□□□ 0.72
IFITM1-204ENST00000528780 CCDC9Q9Y3X0 531 aaKnown RBP19.55■□□□□ 0.72
IFITM1-204ENST00000528780 ADAMTS7Q9UKP4 1686 aa19.55■□□□□ 0.72
IFITM1-204ENST00000528780 TNS2Q63HR2 1409 aa19.54■□□□□ 0.72
IFITM1-204ENST00000528780 AMOTQ4VCS5 1084 aa19.53■□□□□ 0.72
IFITM1-204ENST00000528780 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
IFITM1-204ENST00000528780 QTRT2Q9H974 415 aaKnown RBP19.53■□□□□ 0.72
IFITM1-204ENST00000528780 USP35Q9P2H5 1018 aa19.53■□□□□ 0.72
IFITM1-204ENST00000528780 PLEKHO1Q53GL0 409 aaPredicted RBP19.52■□□□□ 0.72
IFITM1-204ENST00000528780 CCDC146Q8IYE0 955 aa19.52■□□□□ 0.72
IFITM1-204ENST00000528780 GAS2L2Q8NHY3 880 aa19.52■□□□□ 0.72
IFITM1-204ENST00000528780 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
IFITM1-204ENST00000528780 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
IFITM1-204ENST00000528780 ONECUT3O60422 494 aaPredicted RBP19.5■□□□□ 0.71
IFITM1-204ENST00000528780 PHACTR3Q96KR7 559 aa19.5■□□□□ 0.71
IFITM1-204ENST00000528780 SPG7Q9UQ90 795 aa19.5■□□□□ 0.71
IFITM1-204ENST00000528780 KAT6BQ8WYB5 2073 aa19.5■□□□□ 0.71
IFITM1-204ENST00000528780 SIPA1L3O60292 1781 aaPredicted RBP19.49■□□□□ 0.71
IFITM1-204ENST00000528780 RBM6P78332 1123 aaKnown RBP19.49■□□□□ 0.71
IFITM1-204ENST00000528780 NFE2L2Q16236 605 aa19.49■□□□□ 0.71
IFITM1-204ENST00000528780 RGS17Q9UGC6 210 aaPredicted RBP19.49■□□□□ 0.71
IFITM1-204ENST00000528780 ITGB4P16144 1822 aa19.48■□□□□ 0.71
IFITM1-204ENST00000528780 PCDH11XQ9BZA7 1347 aa19.48■□□□□ 0.71
IFITM1-204ENST00000528780 PCDH11YQ9BZA8 1340 aa19.48■□□□□ 0.71
IFITM1-204ENST00000528780 SBF2Q86WG5 1849 aa19.47■□□□□ 0.71
IFITM1-204ENST00000528780 APAF1O14727 1248 aa19.47■□□□□ 0.71
IFITM1-204ENST00000528780 TMPOP42166 694 aaKnown RBP19.47■□□□□ 0.71
IFITM1-204ENST00000528780 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
IFITM1-204ENST00000528780 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
IFITM1-204ENST00000528780 ZCRB1Q8TBF4 217 aaKnown RBP19.47■□□□□ 0.71
IFITM1-204ENST00000528780 DOT1LQ8TEK3 1739 aa19.46■□□□□ 0.71
IFITM1-204ENST00000528780 TOGARAM1Q9Y4F4 1720 aa19.46■□□□□ 0.71
IFITM1-204ENST00000528780 MAP3K5Q99683 1374 aa19.45■□□□□ 0.7
IFITM1-204ENST00000528780 DDB1Q16531 1140 aa19.45■□□□□ 0.7
IFITM1-204ENST00000528780 AKAP4Q5JQC9 854 aa19.45■□□□□ 0.7
IFITM1-204ENST00000528780 ZNF530Q6P9A1 599 aaPredicted RBP19.45■□□□□ 0.7
IFITM1-204ENST00000528780 EXOC5O00471 708 aa19.44■□□□□ 0.7
IFITM1-204ENST00000528780 HTATSF1O43719 755 aaKnown RBP19.44■□□□□ 0.7
IFITM1-204ENST00000528780 LMOD3Q0VAK6 560 aa19.44■□□□□ 0.7
IFITM1-204ENST00000528780 CCDC27Q2M243 656 aa19.44■□□□□ 0.7
IFITM1-204ENST00000528780 RXRBP28702 533 aa19.43■□□□□ 0.7
IFITM1-204ENST00000528780 C1orf141Q5JVX7 400 aa19.43■□□□□ 0.7
IFITM1-204ENST00000528780 IFNL2Q8IZJ0 200 aa19.43■□□□□ 0.7
IFITM1-204ENST00000528780 HSP90AB1P08238 724 aaKnown RBP19.42■□□□□ 0.7
IFITM1-204ENST00000528780 PHKG2P15735 406 aa19.42■□□□□ 0.7
IFITM1-204ENST00000528780 RIPK4P57078 832 aa19.42■□□□□ 0.7
IFITM1-204ENST00000528780 POTEAQ6S8J7 498 aa19.42■□□□□ 0.7
IFITM1-204ENST00000528780 MRC1P22897 1456 aa19.41■□□□□ 0.7
IFITM1-204ENST00000528780 GNAT3A8MTJ3 354 aa19.41■□□□□ 0.7
IFITM1-204ENST00000528780 CYP27B1O15528 508 aa19.41■□□□□ 0.7
IFITM1-204ENST00000528780 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
IFITM1-204ENST00000528780 NKX1-1Q15270 411 aaPredicted RBP19.4■□□□□ 0.7
IFITM1-204ENST00000528780 SEPT12Q8IYM1 358 aa19.4■□□□□ 0.7
IFITM1-204ENST00000528780 BCL9O00512 1426 aa19.4■□□□□ 0.7
IFITM1-204ENST00000528780 RGS12O14924 1447 aa19.4■□□□□ 0.7
IFITM1-204ENST00000528780 NHSQ6T4R5 1651 aa19.4■□□□□ 0.7
IFITM1-204ENST00000528780 RRP7AQ9Y3A4 280 aaKnown RBP19.39■□□□□ 0.69
IFITM1-204ENST00000528780 CEMIPQ8WUJ3 1361 aa19.39■□□□□ 0.69
IFITM1-204ENST00000528780 KDM6AO15550 1401 aaPredicted RBP19.39■□□□□ 0.69
IFITM1-204ENST00000528780 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.69
IFITM1-204ENST00000528780 A0A0G2JS52 829 aa19.38■□□□□ 0.69
IFITM1-204ENST00000528780 MYT1Q01538 1121 aa19.38■□□□□ 0.69
IFITM1-204ENST00000528780 ZBED9Q6R2W3 1325 aa19.38■□□□□ 0.69
IFITM1-204ENST00000528780 TRIM35Q9UPQ4 493 aa19.38■□□□□ 0.69
IFITM1-204ENST00000528780 ZNF521Q96K83 1311 aa19.37■□□□□ 0.69
IFITM1-204ENST00000528780 NEUROD2Q15784 382 aa19.37■□□□□ 0.69
IFITM1-204ENST00000528780 RTF1Q92541 710 aaKnown RBP19.37■□□□□ 0.69
IFITM1-204ENST00000528780 DCAF5Q96JK2 942 aa19.37■□□□□ 0.69
IFITM1-204ENST00000528780 PAPPAQ13219 1627 aa19.36■□□□□ 0.69
IFITM1-204ENST00000528780 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
IFITM1-204ENST00000528780 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
IFITM1-204ENST00000528780 MARCH10Q8NA82 808 aaPredicted RBP19.35■□□□□ 0.69
IFITM1-204ENST00000528780 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
IFITM1-204ENST00000528780 RNMTO43148 476 aaKnown RBP19.34■□□□□ 0.69
IFITM1-204ENST00000528780 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
IFITM1-204ENST00000528780 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
IFITM1-204ENST00000528780 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
IFITM1-204ENST00000528780 BTAF1O14981 1849 aa19.33■□□□□ 0.69
IFITM1-204ENST00000528780 IL17REQ8NFR9 667 aa19.33■□□□□ 0.68
IFITM1-204ENST00000528780 IL16Q14005 1332 aa19.32■□□□□ 0.68
IFITM1-204ENST00000528780 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
IFITM1-204ENST00000528780 KRT27Q7Z3Y8 459 aa19.32■□□□□ 0.68
IFITM1-204ENST00000528780 ERVV-2B6SEH9 535 aa19.31■□□□□ 0.68
IFITM1-204ENST00000528780 MCM10Q7L590 875 aa19.31■□□□□ 0.68
IFITM1-204ENST00000528780 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
IFITM1-204ENST00000528780 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
IFITM1-204ENST00000528780 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
IFITM1-204ENST00000528780 SENP3-EIF4A1A0A087X0R7 540 aa19.29■□□□□ 0.68
IFITM1-204ENST00000528780 BABAM1Q9NWV8 329 aa19.29■□□□□ 0.68
IFITM1-204ENST00000528780 TEFQ10587 303 aa19.28■□□□□ 0.68
IFITM1-204ENST00000528780 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
IFITM1-204ENST00000528780 SLC52A2Q9HAB3 445 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms