RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 CARD10Q9BWT7 1032 aa10.55□□□□□ -0.72
SORL1-207ENST00000528339 SPATA31A5Q5VU36 1347 aa10.55□□□□□ -0.72
SORL1-207ENST00000528339 SPATA31A7Q8IWB4 1347 aa10.55□□□□□ -0.72
SORL1-207ENST00000528339 BARGINQ6ZT62 677 aa10.55□□□□□ -0.72
SORL1-207ENST00000528339 WDR63Q8IWG1 891 aa10.55□□□□□ -0.72
SORL1-207ENST00000528339 PDE3BQ13370 1112 aa10.54□□□□□ -0.72
SORL1-207ENST00000528339 BABAM1Q9NWV8 329 aa10.54□□□□□ -0.72
SORL1-207ENST00000528339 DUSP27Q5VZP5 1158 aa10.54□□□□□ -0.72
SORL1-207ENST00000528339 SPATA31A1Q5TZJ5 1347 aa10.54□□□□□ -0.72
SORL1-207ENST00000528339 MYH14Q7Z406 1995 aaKnown RBP10.53□□□□□ -0.72
SORL1-207ENST00000528339 SLFN5Q08AF3 891 aa10.53□□□□□ -0.72
SORL1-207ENST00000528339 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
SORL1-207ENST00000528339 WWC1Q8IX03 1113 aa10.53□□□□□ -0.72
SORL1-207ENST00000528339 PXDNLA1KZ92 1463 aa10.53□□□□□ -0.72
SORL1-207ENST00000528339 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
SORL1-207ENST00000528339 AEBP1Q8IUX7 1158 aa10.53□□□□□ -0.72
SORL1-207ENST00000528339 THRAP3Q9Y2W1 955 aaKnown RBP10.53□□□□□ -0.72
SORL1-207ENST00000528339 MAP3K5Q99683 1374 aa10.52□□□□□ -0.72
SORL1-207ENST00000528339 DDX60Q8IY21 1712 aaKnown RBP10.52□□□□□ -0.73
SORL1-207ENST00000528339 XPCQ01831 940 aaPredicted RBP10.52□□□□□ -0.73
SORL1-207ENST00000528339 NFE2L2Q16236 605 aa10.52□□□□□ -0.73
SORL1-207ENST00000528339 AFDNP55196 1824 aaKnown RBP10.52□□□□□ -0.73
SORL1-207ENST00000528339 KIF13BQ9NQT8 1826 aa10.52□□□□□ -0.73
SORL1-207ENST00000528339 KIAA1551Q9HCM1 1747 aa10.52□□□□□ -0.73
SORL1-207ENST00000528339 NUP98P52948 1817 aa10.51□□□□□ -0.73
SORL1-207ENST00000528339 ANKRD24Q8TF21 1146 aa10.51□□□□□ -0.73
SORL1-207ENST00000528339 CFAP53Q96M91 514 aa10.5□□□□□ -0.73
SORL1-207ENST00000528339 DLEC1Q9Y238 1755 aa10.5□□□□□ -0.73
SORL1-207ENST00000528339 ZNF646O15015 1829 aaPredicted RBP10.5□□□□□ -0.73
SORL1-207ENST00000528339 VPS72Q15906 364 aa10.49□□□□□ -0.73
SORL1-207ENST00000528339 HSPA1LP34931 641 aa10.49□□□□□ -0.73
SORL1-207ENST00000528339 TCP11L2Q8N4U5 519 aa10.49□□□□□ -0.73
SORL1-207ENST00000528339 LRP5O75197 1615 aa10.49□□□□□ -0.73
SORL1-207ENST00000528339 SOS1Q07889 1333 aaPredicted RBP10.49□□□□□ -0.73
SORL1-207ENST00000528339 MTHFSDQ2M296 383 aaKnown RBP10.48□□□□□ -0.73
SORL1-207ENST00000528339 CABLES1Q8TDN4 633 aa10.48□□□□□ -0.73
SORL1-207ENST00000528339 CHL1O00533 1208 aa10.47□□□□□ -0.73
SORL1-207ENST00000528339 ARAP2Q8WZ64 1704 aa10.47□□□□□ -0.73
SORL1-207ENST00000528339 MYH3P11055 1940 aa10.47□□□□□ -0.73
SORL1-207ENST00000528339 LRP10Q7Z4F1 713 aa10.46□□□□□ -0.73
SORL1-207ENST00000528339 FBXO41Q8TF61 875 aa10.46□□□□□ -0.73
SORL1-207ENST00000528339 PRKAR2BP31323 418 aa10.46□□□□□ -0.73
SORL1-207ENST00000528339 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
SORL1-207ENST00000528339 POLR3GLQ9BT43 218 aa10.46□□□□□ -0.74
SORL1-207ENST00000528339 PNNQ9H307 717 aaKnown RBP10.46□□□□□ -0.74
SORL1-207ENST00000528339 LRRC37AA6NMS7 1700 aa10.46□□□□□ -0.74
SORL1-207ENST00000528339 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
SORL1-207ENST00000528339 EP400Q96L91 3159 aa10.45□□□□□ -0.74
SORL1-207ENST00000528339 UBAP1LF5GYI3 381 aa10.45□□□□□ -0.74
SORL1-207ENST00000528339 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
SORL1-207ENST00000528339 NUTM2GQ5VZR2 741 aa10.45□□□□□ -0.74
SORL1-207ENST00000528339 IL17REQ8NFR9 667 aa10.45□□□□□ -0.74
SORL1-207ENST00000528339 RGS17Q9UGC6 210 aaPredicted RBP10.45□□□□□ -0.74
SORL1-207ENST00000528339 CYP27B1O15528 508 aa10.45□□□□□ -0.74
SORL1-207ENST00000528339 AKAP4Q5JQC9 854 aa10.44□□□□□ -0.74
SORL1-207ENST00000528339 APAF1O14727 1248 aa10.44□□□□□ -0.74
SORL1-207ENST00000528339 PHKG2P15735 406 aa10.44□□□□□ -0.74
SORL1-207ENST00000528339 AMOTQ4VCS5 1084 aa10.44□□□□□ -0.74
SORL1-207ENST00000528339 SULT6B1Q6IMI4 303 aa10.44□□□□□ -0.74
SORL1-207ENST00000528339 NUDCQ9Y266 331 aa10.44□□□□□ -0.74
SORL1-207ENST00000528339 LTBP1Q14766 1721 aa10.44□□□□□ -0.74
SORL1-207ENST00000528339 LARP1Q6PKG0 1096 aaKnown RBP10.43□□□□□ -0.74
SORL1-207ENST00000528339 UNC5CLQ8IV45 518 aa10.43□□□□□ -0.74
SORL1-207ENST00000528339 FANCIQ9NVI1 1328 aa10.43□□□□□ -0.74
SORL1-207ENST00000528339 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
SORL1-207ENST00000528339 TNNT2P45379 298 aaPredicted RBP10.42□□□□□ -0.74
SORL1-207ENST00000528339 BRCA1P38398 1863 aaKnown RBP10.41□□□□□ -0.74
SORL1-207ENST00000528339 E9PSI1 815 aa10.41□□□□□ -0.74
SORL1-207ENST00000528339 PAK3O75914 559 aaPredicted RBP10.41□□□□□ -0.74
SORL1-207ENST00000528339 CDCA7Q9BWT1 371 aaPredicted RBP10.41□□□□□ -0.74
SORL1-207ENST00000528339 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
SORL1-207ENST00000528339 PCDH11XQ9BZA7 1347 aa10.4□□□□□ -0.74
SORL1-207ENST00000528339 PCDH11YQ9BZA8 1340 aa10.4□□□□□ -0.74
SORL1-207ENST00000528339 ATP10DQ9P241 1426 aa10.4□□□□□ -0.74
SORL1-207ENST00000528339 AMPHP49418 695 aa10.4□□□□□ -0.74
SORL1-207ENST00000528339 WDR43Q15061 677 aaKnown RBP eCLIP10.4□□□□□ -0.74
SORL1-207ENST00000528339 CCDC146Q8IYE0 955 aa10.4□□□□□ -0.74
SORL1-207ENST00000528339 CDCA7LQ96GN5 454 aa10.4□□□□□ -0.74
SORL1-207ENST00000528339 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.75
SORL1-207ENST00000528339 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.75
SORL1-207ENST00000528339 RNMTO43148 476 aaKnown RBP10.39□□□□□ -0.75
SORL1-207ENST00000528339 HOXB7P09629 217 aa10.39□□□□□ -0.75
SORL1-207ENST00000528339 ZC3H6P61129 1189 aaKnown RBP10.39□□□□□ -0.75
SORL1-207ENST00000528339 FAM9BQ8IZU0 186 aa10.39□□□□□ -0.75
SORL1-207ENST00000528339 ZNF428Q96B54 188 aa10.39□□□□□ -0.75
SORL1-207ENST00000528339 ANKRD31Q8N7Z5 1873 aa10.39□□□□□ -0.75
SORL1-207ENST00000528339 CHRNA2Q15822 529 aa10.38□□□□□ -0.75
SORL1-207ENST00000528339 BTG4Q9NY30 223 aa10.38□□□□□ -0.75
SORL1-207ENST00000528339 HMOX1P09601 288 aa10.38□□□□□ -0.75
SORL1-207ENST00000528339 COL15A1P39059 1388 aa10.38□□□□□ -0.75
SORL1-207ENST00000528339 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
SORL1-207ENST00000528339 ERVV-2B6SEH9 535 aa10.37□□□□□ -0.75
SORL1-207ENST00000528339 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
SORL1-207ENST00000528339 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
SORL1-207ENST00000528339 IL2RBP14784 551 aa10.37□□□□□ -0.75
SORL1-207ENST00000528339 LMOD3Q0VAK6 560 aa10.36□□□□□ -0.75
SORL1-207ENST00000528339 VAMP4O75379 141 aa10.36□□□□□ -0.75
SORL1-207ENST00000528339 RIPK4P57078 832 aa10.36□□□□□ -0.75
SORL1-207ENST00000528339 ALDH1L2Q3SY69 923 aa10.36□□□□□ -0.75
SORL1-207ENST00000528339 SLC52A2Q9HAB3 445 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms