RNA–Protein interactions for RNA: ENST00000527907.5

ATG13-209, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-209ENST00000527907 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
ATG13-209ENST00000527907 ERBB3P21860 1342 aa12.65□□□□□ -0.38
ATG13-209ENST00000527907 STAC3Q96MF2 364 aa12.65□□□□□ -0.38
ATG13-209ENST00000527907 SIN3AQ96ST3 1273 aa12.65□□□□□ -0.38
ATG13-209ENST00000527907 LY75O60449 1722 aa12.65□□□□□ -0.38
ATG13-209ENST00000527907 NFAT5O94916 1531 aa12.64□□□□□ -0.39
ATG13-209ENST00000527907 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
ATG13-209ENST00000527907 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
ATG13-209ENST00000527907 FSTL1Q12841 308 aa12.64□□□□□ -0.39
ATG13-209ENST00000527907 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
ATG13-209ENST00000527907 DDX54Q8TDD1 881 aaKnown RBP12.64□□□□□ -0.39
ATG13-209ENST00000527907 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
ATG13-209ENST00000527907 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
ATG13-209ENST00000527907 HSPA1AP0DMV8 641 aaKnown RBP12.63□□□□□ -0.39
ATG13-209ENST00000527907 HSPA1BP0DMV9 641 aaKnown RBP12.63□□□□□ -0.39
ATG13-209ENST00000527907 TTC21BQ7Z4L5 1316 aa12.62□□□□□ -0.39
ATG13-209ENST00000527907 NSD2O96028 1365 aa12.62□□□□□ -0.39
ATG13-209ENST00000527907 ANKRD36BQ8N2N9 1353 aa12.62□□□□□ -0.39
ATG13-209ENST00000527907 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
ATG13-209ENST00000527907 TIMELESSQ9UNS1 1208 aa12.62□□□□□ -0.39
ATG13-209ENST00000527907 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
ATG13-209ENST00000527907 NEUROD1Q13562 356 aa12.61□□□□□ -0.39
ATG13-209ENST00000527907 TTC21AQ8NDW8 1320 aa12.6□□□□□ -0.39
ATG13-209ENST00000527907 ANKRD24Q8TF21 1146 aa12.59□□□□□ -0.39
ATG13-209ENST00000527907 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
ATG13-209ENST00000527907 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
ATG13-209ENST00000527907 USP47Q96K76 1375 aa12.58□□□□□ -0.4
ATG13-209ENST00000527907 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
ATG13-209ENST00000527907 L3MBTL2Q969R5 705 aa12.57□□□□□ -0.4
ATG13-209ENST00000527907 ARHGAP27Q6ZUM4 889 aa12.56□□□□□ -0.4
ATG13-209ENST00000527907 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
ATG13-209ENST00000527907 C5P01031 1676 aa12.56□□□□□ -0.4
ATG13-209ENST00000527907 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
ATG13-209ENST00000527907 PLEKHG2Q9H7P9 1386 aa12.55□□□□□ -0.4
ATG13-209ENST00000527907 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
ATG13-209ENST00000527907 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
ATG13-209ENST00000527907 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
ATG13-209ENST00000527907 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
ATG13-209ENST00000527907 KDM2BQ8NHM5 1336 aa12.54□□□□□ -0.4
ATG13-209ENST00000527907 C10orf71Q711Q0 1435 aa12.54□□□□□ -0.4
ATG13-209ENST00000527907 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
ATG13-209ENST00000527907 PHF14O94880 888 aa12.53□□□□□ -0.4
ATG13-209ENST00000527907 AMIGO3Q86WK7 504 aa12.53□□□□□ -0.4
ATG13-209ENST00000527907 AK7Q96M32 723 aa12.53□□□□□ -0.4
ATG13-209ENST00000527907 KIAA1210Q9ULL0 1709 aa12.53□□□□□ -0.4
ATG13-209ENST00000527907 LTN1O94822 1766 aa12.53□□□□□ -0.4
ATG13-209ENST00000527907 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.4
ATG13-209ENST00000527907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.52□□□□□ -0.41
ATG13-209ENST00000527907 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
ATG13-209ENST00000527907 RRAGCQ9HB90 399 aa12.52□□□□□ -0.41
ATG13-209ENST00000527907 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
ATG13-209ENST00000527907 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
ATG13-209ENST00000527907 SMIM5Q71RC9 77 aa12.51□□□□□ -0.41
ATG13-209ENST00000527907 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
ATG13-209ENST00000527907 KTN1Q86UP2 1357 aaKnown RBP12.51□□□□□ -0.41
ATG13-209ENST00000527907 TOGARAM1Q9Y4F4 1720 aa12.51□□□□□ -0.41
ATG13-209ENST00000527907 A0A0G2JLW4 131 aa12.5□□□□□ -0.41
ATG13-209ENST00000527907 FCHSD2O94868 740 aa12.5□□□□□ -0.41
ATG13-209ENST00000527907 TGFB2P61812 414 aa12.5□□□□□ -0.41
ATG13-209ENST00000527907 FAM161AQ3B820 660 aa12.5□□□□□ -0.41
ATG13-209ENST00000527907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATG13-209ENST00000527907 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
ATG13-209ENST00000527907 PALLDQ8WX93 1383 aa12.5□□□□□ -0.41
ATG13-209ENST00000527907 NSD3Q9BZ95 1437 aa12.5□□□□□ -0.41
ATG13-209ENST00000527907 C4BP0C0L5 1744 aa12.5□□□□□ -0.41
ATG13-209ENST00000527907 UBR3Q6ZT12 1888 aa12.49□□□□□ -0.41
ATG13-209ENST00000527907 N4BP2Q86UW6 1770 aaPredicted RBP12.49□□□□□ -0.41
ATG13-209ENST00000527907 MMP10P09238 476 aa12.49□□□□□ -0.41
ATG13-209ENST00000527907 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
ATG13-209ENST00000527907 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
ATG13-209ENST00000527907 SSFA2P28290 1259 aa12.48□□□□□ -0.41
ATG13-209ENST00000527907 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
ATG13-209ENST00000527907 NME9Q86XW9 330 aa12.48□□□□□ -0.41
ATG13-209ENST00000527907 PKD1L3Q7Z443 1732 aa12.48□□□□□ -0.41
ATG13-209ENST00000527907 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
ATG13-209ENST00000527907 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
ATG13-209ENST00000527907 DPEP1P16444 411 aa12.47□□□□□ -0.41
ATG13-209ENST00000527907 IP6K1Q92551 441 aa12.47□□□□□ -0.41
ATG13-209ENST00000527907 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
ATG13-209ENST00000527907 MEGF6O75095 1541 aa12.47□□□□□ -0.41
ATG13-209ENST00000527907 PRDM10Q9NQV6 1147 aa12.46□□□□□ -0.41
ATG13-209ENST00000527907 FOXN1O15353 648 aa12.45□□□□□ -0.42
ATG13-209ENST00000527907 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
ATG13-209ENST00000527907 SMARCC1Q92922 1105 aaPredicted RBP12.45□□□□□ -0.42
ATG13-209ENST00000527907 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
ATG13-209ENST00000527907 BRCA1P38398 1863 aaKnown RBP12.44□□□□□ -0.42
ATG13-209ENST00000527907 ARFGEF1Q9Y6D6 1849 aa12.43□□□□□ -0.42
ATG13-209ENST00000527907 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
ATG13-209ENST00000527907 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
ATG13-209ENST00000527907 GNPATO15228 680 aa12.42□□□□□ -0.42
ATG13-209ENST00000527907 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
ATG13-209ENST00000527907 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
ATG13-209ENST00000527907 CCDC87Q9NVE4 849 aa12.42□□□□□ -0.42
ATG13-209ENST00000527907 CGNL1Q0VF96 1302 aa12.41□□□□□ -0.42
ATG13-209ENST00000527907 VEGFAP15692 232 aaPredicted RBP12.41□□□□□ -0.42
ATG13-209ENST00000527907 KCNA3P22001 575 aa12.41□□□□□ -0.42
ATG13-209ENST00000527907 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
ATG13-209ENST00000527907 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
ATG13-209ENST00000527907 CTCFP49711 727 aaPredicted RBP12.4□□□□□ -0.42
ATG13-209ENST00000527907 MLLT1Q03111 559 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms