RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 LRRC4BQ9NT99 713 aa11.86□□□□□ -0.51
CHD7-206ENST00000527900 NSD2O96028 1365 aa11.85□□□□□ -0.51
CHD7-206ENST00000527900 PTGER2P43116 358 aa11.85□□□□□ -0.51
CHD7-206ENST00000527900 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
CHD7-206ENST00000527900 ANKRD26Q9UPS8 1709 aa11.85□□□□□ -0.51
CHD7-206ENST00000527900 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
CHD7-206ENST00000527900 CGNL1Q0VF96 1302 aa11.85□□□□□ -0.51
CHD7-206ENST00000527900 FLT4P35916 1363 aa11.84□□□□□ -0.51
CHD7-206ENST00000527900 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
CHD7-206ENST00000527900 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
CHD7-206ENST00000527900 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
CHD7-206ENST00000527900 NCAPD2Q15021 1401 aa11.84□□□□□ -0.51
CHD7-206ENST00000527900 MAP2P11137 1827 aaKnown RBP11.83□□□□□ -0.51
CHD7-206ENST00000527900 LY75O60449 1722 aa11.83□□□□□ -0.52
CHD7-206ENST00000527900 DOT1LQ8TEK3 1739 aa11.83□□□□□ -0.52
CHD7-206ENST00000527900 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
CHD7-206ENST00000527900 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
CHD7-206ENST00000527900 AKT1S1Q96B36 256 aa11.83□□□□□ -0.52
CHD7-206ENST00000527900 QSER1Q2KHR3 1735 aa11.83□□□□□ -0.52
CHD7-206ENST00000527900 ZBTB7AO95365 584 aa11.82□□□□□ -0.52
CHD7-206ENST00000527900 ZNF827Q17R98 1081 aa11.82□□□□□ -0.52
CHD7-206ENST00000527900 SLC27A3Q5K4L6 730 aa11.82□□□□□ -0.52
CHD7-206ENST00000527900 EMILIN1Q9Y6C2 1016 aa11.82□□□□□ -0.52
CHD7-206ENST00000527900 COL24A1Q17RW2 1714 aa11.81□□□□□ -0.52
CHD7-206ENST00000527900 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
CHD7-206ENST00000527900 WASHC2AQ641Q2 1341 aa11.81□□□□□ -0.52
CHD7-206ENST00000527900 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
CHD7-206ENST00000527900 HSPA5P11021 654 aaKnown RBP11.8□□□□□ -0.52
CHD7-206ENST00000527900 EIF4G2P78344 907 aaKnown RBP eCLIP11.8□□□□□ -0.52
CHD7-206ENST00000527900 RAPGEF4Q8WZA2 1011 aa11.8□□□□□ -0.52
CHD7-206ENST00000527900 MTFR1LQ9H019 292 aa11.8□□□□□ -0.52
CHD7-206ENST00000527900 POLKQ9UBT6 870 aa11.8□□□□□ -0.52
CHD7-206ENST00000527900 PPP1R1BQ9UD71 204 aaPredicted RBP11.8□□□□□ -0.52
CHD7-206ENST00000527900 PKD1L3Q7Z443 1732 aa11.8□□□□□ -0.52
CHD7-206ENST00000527900 TUBGCP6Q96RT7 1819 aa11.79□□□□□ -0.52
CHD7-206ENST00000527900 CYP27B1O15528 508 aa11.79□□□□□ -0.52
CHD7-206ENST00000527900 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
CHD7-206ENST00000527900 KCNQ4P56696 695 aa11.78□□□□□ -0.52
CHD7-206ENST00000527900 UTRNP46939 3433 aa11.78□□□□□ -0.52
CHD7-206ENST00000527900 ITGB4P16144 1822 aa11.77□□□□□ -0.52
CHD7-206ENST00000527900 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.53
CHD7-206ENST00000527900 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
CHD7-206ENST00000527900 EYA1Q99502 592 aa11.77□□□□□ -0.53
CHD7-206ENST00000527900 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
CHD7-206ENST00000527900 PCDH11XQ9BZA7 1347 aa11.77□□□□□ -0.53
CHD7-206ENST00000527900 PCDH11YQ9BZA8 1340 aa11.77□□□□□ -0.53
CHD7-206ENST00000527900 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.53
CHD7-206ENST00000527900 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
CHD7-206ENST00000527900 SLC16A10Q8TF71 515 aa11.76□□□□□ -0.53
CHD7-206ENST00000527900 SYT17Q9BSW7 474 aa11.76□□□□□ -0.53
CHD7-206ENST00000527900 PANK3Q9H999 370 aa11.76□□□□□ -0.53
CHD7-206ENST00000527900 TAF1LQ8IZX4 1826 aa11.75□□□□□ -0.53
CHD7-206ENST00000527900 FHDC1Q9C0D6 1143 aaPredicted RBP11.75□□□□□ -0.53
CHD7-206ENST00000527900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.533e-7■■■■□ 25.7
CHD7-206ENST00000527900 MAP3K5Q99683 1374 aa11.75□□□□□ -0.53
CHD7-206ENST00000527900 PPM1GO15355 546 aaPredicted RBP11.74□□□□□ -0.53
CHD7-206ENST00000527900 EIF4A2Q14240 407 aaKnown RBP11.74□□□□□ -0.53
CHD7-206ENST00000527900 ARXQ96QS3 562 aa11.74□□□□□ -0.53
CHD7-206ENST00000527900 CCNL1Q9UK58 526 aaPredicted RBP11.74□□□□□ -0.53
CHD7-206ENST00000527900 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
CHD7-206ENST00000527900 C5P01031 1676 aa11.72□□□□□ -0.53
CHD7-206ENST00000527900 PLEKHG2Q9H7P9 1386 aa11.72□□□□□ -0.53
CHD7-206ENST00000527900 MPRIPQ6WCQ1 1025 aa11.72□□□□□ -0.53
CHD7-206ENST00000527900 PIGBQ92521 554 aa11.72□□□□□ -0.53
CHD7-206ENST00000527900 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
CHD7-206ENST00000527900 SPG7Q9UQ90 795 aa11.72□□□□□ -0.53
CHD7-206ENST00000527900 PALLDQ8WX93 1383 aa11.71□□□□□ -0.53
CHD7-206ENST00000527900 IGSF1Q8N6C5 1336 aa11.71□□□□□ -0.53
CHD7-206ENST00000527900 YY1P25490 414 aa11.71□□□□□ -0.53
CHD7-206ENST00000527900 TNNT2P45379 298 aaPredicted RBP11.71□□□□□ -0.53
CHD7-206ENST00000527900 COL23A1Q86Y22 540 aaPredicted RBP11.71□□□□□ -0.53
CHD7-206ENST00000527900 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.54
CHD7-206ENST00000527900 PHKG2P15735 406 aa11.7□□□□□ -0.54
CHD7-206ENST00000527900 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
CHD7-206ENST00000527900 IFNL2Q8IZJ0 200 aa11.69□□□□□ -0.54
CHD7-206ENST00000527900 SMARCC1Q92922 1105 aaPredicted RBP11.69□□□□□ -0.54
CHD7-206ENST00000527900 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
CHD7-206ENST00000527900 UBR3Q6ZT12 1888 aa11.68□□□□□ -0.54
CHD7-206ENST00000527900 KIF7Q2M1P5 1343 aa11.68□□□□□ -0.54
CHD7-206ENST00000527900 DCAF8L1A6NGE4 600 aa11.68□□□□□ -0.54
CHD7-206ENST00000527900 PER1O15534 1290 aaPredicted RBP11.68□□□□□ -0.54
CHD7-206ENST00000527900 HMGB2P26583 209 aaKnown RBP11.68□□□□□ -0.54
CHD7-206ENST00000527900 AMIGO3Q86WK7 504 aa11.68□□□□□ -0.54
CHD7-206ENST00000527900 CHD4Q14839 1912 aa11.68□□□□□ -0.54
CHD7-206ENST00000527900 MORC1Q86VD1 984 aa11.67□□□□□ -0.54
CHD7-206ENST00000527900 ASAP1Q9ULH1 1129 aa11.67□□□□□ -0.54
CHD7-206ENST00000527900 LOC102724428A0A0B4J2F2 783 aa11.66□□□□□ -0.54
CHD7-206ENST00000527900 POLD1P28340 1107 aa11.66□□□□□ -0.54
CHD7-206ENST00000527900 SIK1P57059 783 aa11.66□□□□□ -0.54
CHD7-206ENST00000527900 ATG3Q9NT62 314 aa11.66□□□□□ -0.54
CHD7-206ENST00000527900 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.54
CHD7-206ENST00000527900 ERVV-2B6SEH9 535 aa11.65□□□□□ -0.54
CHD7-206ENST00000527900 IL13P35225 146 aa11.65□□□□□ -0.54
CHD7-206ENST00000527900 ITPK1Q13572 414 aa11.65□□□□□ -0.54
CHD7-206ENST00000527900 LINC00116Q8NCU8 138 aa11.65□□□□□ -0.54
CHD7-206ENST00000527900 FLAD1Q8NFF5 587 aa11.65□□□□□ -0.54
CHD7-206ENST00000527900 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
CHD7-206ENST00000527900 KNSTRNQ9Y448 316 aa11.65□□□□□ -0.54
CHD7-206ENST00000527900 KDRP35968 1356 aa11.65□□□□□ -0.55
CHD7-206ENST00000527900 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms