RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 UACAQ9BZF9 1416 aa9.32□□□□□ -0.92
ATPAF1-208ENST00000526821 CAPN5O15484 640 aaPredicted RBP9.32□□□□□ -0.92
ATPAF1-208ENST00000526821 NR5A1Q13285 461 aa9.32□□□□□ -0.92
ATPAF1-208ENST00000526821 NNTQ13423 1086 aa9.32□□□□□ -0.92
ATPAF1-208ENST00000526821 FBXO31Q5XUX0 539 aaPredicted RBP9.32□□□□□ -0.92
ATPAF1-208ENST00000526821 ZBTB33Q86T24 672 aa9.32□□□□□ -0.92
ATPAF1-208ENST00000526821 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
ATPAF1-208ENST00000526821 VASH1Q7L8A9 365 aaPredicted RBP9.31□□□□□ -0.92
ATPAF1-208ENST00000526821 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
ATPAF1-208ENST00000526821 CDV3Q9UKY7 258 aaKnown RBP9.31□□□□□ -0.92
ATPAF1-208ENST00000526821 GPSM3Q9Y4H4 160 aa9.31□□□□□ -0.92
ATPAF1-208ENST00000526821 CCNB3Q8WWL7 1395 aa9.31□□□□□ -0.92
ATPAF1-208ENST00000526821 ATP10BO94823 1461 aa9.31□□□□□ -0.92
ATPAF1-208ENST00000526821 NCOA2Q15596 1464 aa9.31□□□□□ -0.92
ATPAF1-208ENST00000526821 UHRF1BP1LA0JNW5 1464 aa9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 KIFC2Q96AC6 838 aa9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 SLC10A4Q96EP9 437 aa9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 C1QTNF2Q9BXJ5 285 aa9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 MAP4K5Q9Y4K4 846 aa9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 SUPT6HQ7KZ85 1726 aaKnown RBP9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 ABCC2Q92887 1545 aa9.3□□□□□ -0.92
ATPAF1-208ENST00000526821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.29□□□□□ -0.92
ATPAF1-208ENST00000526821 C11orf95C9JLR9 678 aaPredicted RBP9.29□□□□□ -0.92
ATPAF1-208ENST00000526821 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
ATPAF1-208ENST00000526821 BANK1Q8NDB2 785 aa9.29□□□□□ -0.92
ATPAF1-208ENST00000526821 TROQ12816 1431 aaPredicted RBP9.29□□□□□ -0.92
ATPAF1-208ENST00000526821 CDK11AQ9UQ88 783 aaPredicted RBP9.28□□□□□ -0.92
ATPAF1-208ENST00000526821 MYOM3Q5VTT5 1437 aa9.28□□□□□ -0.92
ATPAF1-208ENST00000526821 ARID3CA6NKF2 412 aa9.27□□□□□ -0.93
ATPAF1-208ENST00000526821 WDR4P57081 412 aaKnown RBP9.27□□□□□ -0.93
ATPAF1-208ENST00000526821 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
ATPAF1-208ENST00000526821 GMPR2Q9P2T1 348 aaKnown RBP9.27□□□□□ -0.93
ATPAF1-208ENST00000526821 DACH1Q9UI36 760 aa9.27□□□□□ -0.93
ATPAF1-208ENST00000526821 FGD6Q6ZV73 1430 aa9.27□□□□□ -0.93
ATPAF1-208ENST00000526821 ADCY10Q96PN6 1610 aa9.27□□□□□ -0.93
ATPAF1-208ENST00000526821 KDM5BQ9UGL1 1544 aa9.26□□□□□ -0.93
ATPAF1-208ENST00000526821 FSHRP23945 695 aa9.26□□□□□ -0.93
ATPAF1-208ENST00000526821 HMX1Q9NP08 348 aaPredicted RBP9.26□□□□□ -0.93
ATPAF1-208ENST00000526821 SCARF1Q14162 830 aa9.25□□□□□ -0.93
ATPAF1-208ENST00000526821 TRIM52Q96A61 297 aa9.25□□□□□ -0.93
ATPAF1-208ENST00000526821 PRM3Q9NNZ6 103 aa9.25□□□□□ -0.93
ATPAF1-208ENST00000526821 MIA2Q96PC5 1412 aa9.24□□□□□ -0.93
ATPAF1-208ENST00000526821 TCOF1Q13428 1488 aaKnown RBP9.24□□□□□ -0.93
ATPAF1-208ENST00000526821 NBPF20Q3BBV1 942 aa9.24□□□□□ -0.93
ATPAF1-208ENST00000526821 EMILIN1Q9Y6C2 1016 aa9.24□□□□□ -0.93
ATPAF1-208ENST00000526821 ABCC10Q5T3U5 1492 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 PLEKHD1A6NEE1 506 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 POTECB2RU33 542 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 SOCS7O14512 581 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 UPP2O95045 317 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 ZIC2O95409 532 aaPredicted RBP9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 DHX9Q08211 1270 aaKnown RBP9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 DZIP3Q86Y13 1208 aaKnown RBP9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 CCDC116Q8IYX3 515 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 EPS8L1Q8TE68 723 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 TRIM47Q96LD4 638 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 PGPEP1Q9NXJ5 209 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 KIF14Q15058 1648 aa9.23□□□□□ -0.93
ATPAF1-208ENST00000526821 TIMP2P16035 220 aa9.22□□□□□ -0.93
ATPAF1-208ENST00000526821 GRM5P41594 1212 aa9.22□□□□□ -0.93
ATPAF1-208ENST00000526821 ADAM32Q8TC27 787 aa9.22□□□□□ -0.93
ATPAF1-208ENST00000526821 ZNF330Q9Y3S2 320 aaPredicted RBP9.22□□□□□ -0.93
ATPAF1-208ENST00000526821 GPATCH8Q9UKJ3 1502 aaKnown RBP9.21□□□□□ -0.93
ATPAF1-208ENST00000526821 ZCCHC11Q5TAX3 1644 aaKnown RBP9.21□□□□□ -0.93
ATPAF1-208ENST00000526821 PTPN23Q9H3S7 1636 aa9.21□□□□□ -0.93
ATPAF1-208ENST00000526821 KCTD15Q96SI1 283 aaPredicted RBP9.21□□□□□ -0.94
ATPAF1-208ENST00000526821 BMP1P13497 986 aa9.2□□□□□ -0.94
ATPAF1-208ENST00000526821 MRPL14Q6P1L8 145 aaKnown RBP9.2□□□□□ -0.94
ATPAF1-208ENST00000526821 TRIM34Q9BYJ4 488 aa9.2□□□□□ -0.94
ATPAF1-208ENST00000526821 NDUFB9Q9Y6M9 179 aa9.2□□□□□ -0.94
ATPAF1-208ENST00000526821 ZBBXA8MT70 800 aa9.19□□□□□ -0.94
ATPAF1-208ENST00000526821 NR3C2P08235 984 aa9.19□□□□□ -0.94
ATPAF1-208ENST00000526821 FAM50AQ14320 339 aaKnown RBP9.19□□□□□ -0.94
ATPAF1-208ENST00000526821 ITPKCQ96DU7 683 aa9.19□□□□□ -0.94
ATPAF1-208ENST00000526821 PTPRKQ15262 1439 aa9.18□□□□□ -0.94
ATPAF1-208ENST00000526821 ZNF775Q96BV0 537 aaPredicted RBP9.18□□□□□ -0.94
ATPAF1-208ENST00000526821 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
ATPAF1-208ENST00000526821 MCCD1P59942 119 aaPredicted RBP9.17□□□□□ -0.94
ATPAF1-208ENST00000526821 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
ATPAF1-208ENST00000526821 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
ATPAF1-208ENST00000526821 KLF16Q9BXK1 252 aaPredicted RBP9.17□□□□□ -0.94
ATPAF1-208ENST00000526821 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
ATPAF1-208ENST00000526821 CDC42BPAQ5VT25 1732 aa9.17□□□□□ -0.94
ATPAF1-208ENST00000526821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.16□□□□□ -0.94
ATPAF1-208ENST00000526821 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
ATPAF1-208ENST00000526821 SNRPBP14678 240 aaKnown RBP9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 CCDC125Q86Z20 511 aa9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 ZFP42Q96MM3 310 aa9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 PURBQ96QR8 312 aaKnown RBP9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 CFDP1Q9UEE9 299 aaPredicted RBP9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 PCDHB9Q9Y5E1 797 aa9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 RIMBP3CA6NJZ7 1639 aa9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 RIMBP3BA6NNM3 1639 aa9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 RIMBP3Q9UFD9 1639 aa9.15□□□□□ -0.94
ATPAF1-208ENST00000526821 TTC37Q6PGP7 1564 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms