RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 PKD1L3Q7Z443 1732 aa18.93■□□□□ 0.62
COLCA2-202ENST00000526216 LRRC37A3O60309 1634 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 PARP4Q9UKK3 1724 aaKnown RBP18.91■□□□□ 0.62
COLCA2-202ENST00000526216 WNK3Q9BYP7 1800 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 EVA1CP58658 441 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 GOLGA2Q08379 1002 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 SLFN5Q08AF3 891 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 TRMT2AQ8IZ69 625 aaKnown RBP18.91■□□□□ 0.62
COLCA2-202ENST00000526216 THUMPD2Q9BTF0 503 aaKnown RBP18.91■□□□□ 0.62
COLCA2-202ENST00000526216 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
COLCA2-202ENST00000526216 GAS2L2Q8NHY3 880 aa18.9■□□□□ 0.62
COLCA2-202ENST00000526216 BCL9LQ86UU0 1499 aa18.9■□□□□ 0.62
COLCA2-202ENST00000526216 SHANK3Q9BYB0 1731 aa18.89■□□□□ 0.61
COLCA2-202ENST00000526216 DISP2A7MBM2 1401 aa18.89■□□□□ 0.61
COLCA2-202ENST00000526216 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
COLCA2-202ENST00000526216 PLEKHG2Q9H7P9 1386 aa18.88■□□□□ 0.61
COLCA2-202ENST00000526216 DUSP27Q5VZP5 1158 aa18.88■□□□□ 0.61
COLCA2-202ENST00000526216 C8orf37Q96NL8 207 aa18.88■□□□□ 0.61
COLCA2-202ENST00000526216 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.88■□□□□ 0.61
COLCA2-202ENST00000526216 MAP3K5Q99683 1374 aa18.87■□□□□ 0.61
COLCA2-202ENST00000526216 TATP17735 454 aaPredicted RBP18.87■□□□□ 0.61
COLCA2-202ENST00000526216 PLEKHO1Q53GL0 409 aaPredicted RBP18.87■□□□□ 0.61
COLCA2-202ENST00000526216 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
COLCA2-202ENST00000526216 ADAMTS7Q9UKP4 1686 aa18.87■□□□□ 0.61
COLCA2-202ENST00000526216 MCM10Q7L590 875 aa18.86■□□□□ 0.61
COLCA2-202ENST00000526216 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
COLCA2-202ENST00000526216 IL16Q14005 1332 aa18.85■□□□□ 0.61
COLCA2-202ENST00000526216 E9PSI1 815 aa18.85■□□□□ 0.61
COLCA2-202ENST00000526216 LMOD3Q0VAK6 560 aa18.85■□□□□ 0.61
COLCA2-202ENST00000526216 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
COLCA2-202ENST00000526216 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
COLCA2-202ENST00000526216 NGLY1Q96IV0 654 aa18.84■□□□□ 0.61
COLCA2-202ENST00000526216 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 GNAT3A8MTJ3 354 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 UNC5CLQ8IV45 518 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 IL17REQ8NFR9 667 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.61
COLCA2-202ENST00000526216 USP35Q9P2H5 1018 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
COLCA2-202ENST00000526216 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
COLCA2-202ENST00000526216 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 IL2RBP14784 551 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 AKAP4Q5JQC9 854 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 CYP27B1O15528 508 aa18.81■□□□□ 0.6
COLCA2-202ENST00000526216 KDM6AO15550 1401 aaPredicted RBP18.81■□□□□ 0.6
COLCA2-202ENST00000526216 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
COLCA2-202ENST00000526216 RNF39Q9H2S5 420 aa18.81■□□□□ 0.6
COLCA2-202ENST00000526216 CEMIPQ8WUJ3 1361 aa18.81■□□□□ 0.6
COLCA2-202ENST00000526216 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
COLCA2-202ENST00000526216 PHKG2P15735 406 aa18.8■□□□□ 0.6
COLCA2-202ENST00000526216 LGR6Q9HBX8 967 aa18.8■□□□□ 0.6
COLCA2-202ENST00000526216 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
COLCA2-202ENST00000526216 VPS72Q15906 364 aa18.79■□□□□ 0.6
COLCA2-202ENST00000526216 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
COLCA2-202ENST00000526216 AFF2P51816 1311 aa18.79■□□□□ 0.6
COLCA2-202ENST00000526216 SIPA1L3O60292 1781 aaPredicted RBP18.79■□□□□ 0.6
COLCA2-202ENST00000526216 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
COLCA2-202ENST00000526216 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
COLCA2-202ENST00000526216 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
COLCA2-202ENST00000526216 USP21Q9UK80 565 aa18.78■□□□□ 0.6
COLCA2-202ENST00000526216 GLI3P10071 1580 aa18.78■□□□□ 0.6
COLCA2-202ENST00000526216 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
COLCA2-202ENST00000526216 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
COLCA2-202ENST00000526216 ZCRB1Q8TBF4 217 aaKnown RBP18.77■□□□□ 0.6
COLCA2-202ENST00000526216 CALD1Q05682 793 aaKnown RBP18.76■□□□□ 0.59
COLCA2-202ENST00000526216 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 THRAP3Q9Y2W1 955 aaKnown RBP18.76■□□□□ 0.59
COLCA2-202ENST00000526216 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
COLCA2-202ENST00000526216 ATRNO75882 1429 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 TNS2Q63HR2 1409 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 MRC1P22897 1456 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 TOGARAM1Q9Y4F4 1720 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 GNAI1P63096 354 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 PCDH11XQ9BZA7 1347 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 PCDH11YQ9BZA8 1340 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 KDM3BQ7LBC6 1761 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 CHL1O00533 1208 aa18.74■□□□□ 0.59
COLCA2-202ENST00000526216 BARGINQ6ZT62 677 aa18.74■□□□□ 0.59
COLCA2-202ENST00000526216 THSD7AQ9UPZ6 1657 aa18.74■□□□□ 0.59
COLCA2-202ENST00000526216 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
COLCA2-202ENST00000526216 CCDC9Q9Y3X0 531 aaKnown RBP18.74■□□□□ 0.59
COLCA2-202ENST00000526216 MIS18AQ9NYP9 233 aa18.73■□□□□ 0.59
COLCA2-202ENST00000526216 NKX1-1Q15270 411 aaPredicted RBP18.72■□□□□ 0.59
COLCA2-202ENST00000526216 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
COLCA2-202ENST00000526216 CDCA7Q9BWT1 371 aaPredicted RBP18.71■□□□□ 0.59
COLCA2-202ENST00000526216 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
COLCA2-202ENST00000526216 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
COLCA2-202ENST00000526216 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
COLCA2-202ENST00000526216 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
COLCA2-202ENST00000526216 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
COLCA2-202ENST00000526216 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
COLCA2-202ENST00000526216 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
COLCA2-202ENST00000526216 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms