RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 PKD1L3Q7Z443 1732 aa18.93■□□□□ 0.62
COLCA2-202ENST00000526216 LRRC37A3O60309 1634 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 PARP4Q9UKK3 1724 aaKnown RBP18.91■□□□□ 0.62
COLCA2-202ENST00000526216 WNK3Q9BYP7 1800 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 EVA1CP58658 441 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 GOLGA2Q08379 1002 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 SLFN5Q08AF3 891 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 TRMT2AQ8IZ69 625 aaKnown RBP18.91■□□□□ 0.62
COLCA2-202ENST00000526216 THUMPD2Q9BTF0 503 aaKnown RBP18.91■□□□□ 0.62
COLCA2-202ENST00000526216 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
COLCA2-202ENST00000526216 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
COLCA2-202ENST00000526216 GAS2L2Q8NHY3 880 aa18.9■□□□□ 0.62
COLCA2-202ENST00000526216 BCL9LQ86UU0 1499 aa18.9■□□□□ 0.62
COLCA2-202ENST00000526216 SHANK3Q9BYB0 1731 aa18.89■□□□□ 0.61
COLCA2-202ENST00000526216 DISP2A7MBM2 1401 aa18.89■□□□□ 0.61
COLCA2-202ENST00000526216 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
COLCA2-202ENST00000526216 PLEKHG2Q9H7P9 1386 aa18.88■□□□□ 0.61
COLCA2-202ENST00000526216 DUSP27Q5VZP5 1158 aa18.88■□□□□ 0.61
COLCA2-202ENST00000526216 C8orf37Q96NL8 207 aa18.88■□□□□ 0.61
COLCA2-202ENST00000526216 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.88■□□□□ 0.61
COLCA2-202ENST00000526216 MAP3K5Q99683 1374 aa18.87■□□□□ 0.61
COLCA2-202ENST00000526216 TATP17735 454 aaPredicted RBP18.87■□□□□ 0.61
COLCA2-202ENST00000526216 PLEKHO1Q53GL0 409 aaPredicted RBP18.87■□□□□ 0.61
COLCA2-202ENST00000526216 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
COLCA2-202ENST00000526216 ADAMTS7Q9UKP4 1686 aa18.87■□□□□ 0.61
COLCA2-202ENST00000526216 MCM10Q7L590 875 aa18.86■□□□□ 0.61
COLCA2-202ENST00000526216 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
COLCA2-202ENST00000526216 IL16Q14005 1332 aa18.85■□□□□ 0.61
COLCA2-202ENST00000526216 E9PSI1 815 aa18.85■□□□□ 0.61
COLCA2-202ENST00000526216 LMOD3Q0VAK6 560 aa18.85■□□□□ 0.61
COLCA2-202ENST00000526216 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
COLCA2-202ENST00000526216 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
COLCA2-202ENST00000526216 NGLY1Q96IV0 654 aa18.84■□□□□ 0.61
COLCA2-202ENST00000526216 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 GNAT3A8MTJ3 354 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 UNC5CLQ8IV45 518 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 IL17REQ8NFR9 667 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.61
COLCA2-202ENST00000526216 USP35Q9P2H5 1018 aa18.83■□□□□ 0.61
COLCA2-202ENST00000526216 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
COLCA2-202ENST00000526216 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
COLCA2-202ENST00000526216 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 IL2RBP14784 551 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 AKAP4Q5JQC9 854 aa18.82■□□□□ 0.6
COLCA2-202ENST00000526216 CYP27B1O15528 508 aa18.81■□□□□ 0.6
COLCA2-202ENST00000526216 KDM6AO15550 1401 aaPredicted RBP18.81■□□□□ 0.6
COLCA2-202ENST00000526216 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
COLCA2-202ENST00000526216 RNF39Q9H2S5 420 aa18.81■□□□□ 0.6
COLCA2-202ENST00000526216 CEMIPQ8WUJ3 1361 aa18.81■□□□□ 0.6
COLCA2-202ENST00000526216 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
COLCA2-202ENST00000526216 PHKG2P15735 406 aa18.8■□□□□ 0.6
COLCA2-202ENST00000526216 LGR6Q9HBX8 967 aa18.8■□□□□ 0.6
COLCA2-202ENST00000526216 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
COLCA2-202ENST00000526216 VPS72Q15906 364 aa18.79■□□□□ 0.6
COLCA2-202ENST00000526216 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
COLCA2-202ENST00000526216 AFF2P51816 1311 aa18.79■□□□□ 0.6
COLCA2-202ENST00000526216 SIPA1L3O60292 1781 aaPredicted RBP18.79■□□□□ 0.6
COLCA2-202ENST00000526216 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
COLCA2-202ENST00000526216 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
COLCA2-202ENST00000526216 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
COLCA2-202ENST00000526216 USP21Q9UK80 565 aa18.78■□□□□ 0.6
COLCA2-202ENST00000526216 GLI3P10071 1580 aa18.78■□□□□ 0.6
COLCA2-202ENST00000526216 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
COLCA2-202ENST00000526216 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
COLCA2-202ENST00000526216 ZCRB1Q8TBF4 217 aaKnown RBP18.77■□□□□ 0.6
COLCA2-202ENST00000526216 CALD1Q05682 793 aaKnown RBP18.76■□□□□ 0.59
COLCA2-202ENST00000526216 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 THRAP3Q9Y2W1 955 aaKnown RBP18.76■□□□□ 0.59
COLCA2-202ENST00000526216 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
COLCA2-202ENST00000526216 ATRNO75882 1429 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 TNS2Q63HR2 1409 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 MRC1P22897 1456 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 TOGARAM1Q9Y4F4 1720 aa18.76■□□□□ 0.59
COLCA2-202ENST00000526216 GNAI1P63096 354 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 PCDH11XQ9BZA7 1347 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 PCDH11YQ9BZA8 1340 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 KDM3BQ7LBC6 1761 aa18.75■□□□□ 0.59
COLCA2-202ENST00000526216 CHL1O00533 1208 aa18.74■□□□□ 0.59
COLCA2-202ENST00000526216 BARGINQ6ZT62 677 aa18.74■□□□□ 0.59
COLCA2-202ENST00000526216 THSD7AQ9UPZ6 1657 aa18.74■□□□□ 0.59
COLCA2-202ENST00000526216 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
COLCA2-202ENST00000526216 CCDC9Q9Y3X0 531 aaKnown RBP18.74■□□□□ 0.59
COLCA2-202ENST00000526216 MIS18AQ9NYP9 233 aa18.73■□□□□ 0.59
COLCA2-202ENST00000526216 NKX1-1Q15270 411 aaPredicted RBP18.72■□□□□ 0.59
COLCA2-202ENST00000526216 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
COLCA2-202ENST00000526216 CDCA7Q9BWT1 371 aaPredicted RBP18.71■□□□□ 0.59
COLCA2-202ENST00000526216 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
COLCA2-202ENST00000526216 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
COLCA2-202ENST00000526216 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
COLCA2-202ENST00000526216 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
COLCA2-202ENST00000526216 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
COLCA2-202ENST00000526216 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
COLCA2-202ENST00000526216 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
COLCA2-202ENST00000526216 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms