RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 SV2AQ7L0J3 742 aa10.2□□□□□ -0.78
CSDE1-210ENST00000525878 SNRKQ9NRH2 765 aa10.2□□□□□ -0.78
CSDE1-210ENST00000525878 NDUFB9Q9Y6M9 179 aa10.2□□□□□ -0.78
CSDE1-210ENST00000525878 GPC1P35052 558 aa10.19□□□□□ -0.78
CSDE1-210ENST00000525878 ZNF592Q92610 1267 aa10.19□□□□□ -0.78
CSDE1-210ENST00000525878 SLURP2P0DP57 97 aa10.18□□□□□ -0.78
CSDE1-210ENST00000525878 A0A1W2PRU2 124 aa10.17□□□□□ -0.78
CSDE1-210ENST00000525878 CUEDC1Q9NWM3 386 aaPredicted RBP10.17□□□□□ -0.78
CSDE1-210ENST00000525878 CDC14CA4D256 554 aa10.16□□□□□ -0.78
CSDE1-210ENST00000525878 TRAK2O60296 914 aa10.16□□□□□ -0.78
CSDE1-210ENST00000525878 SCTRP47872 440 aa10.16□□□□□ -0.78
CSDE1-210ENST00000525878 GSK3AP49840 483 aa10.16□□□□□ -0.78
CSDE1-210ENST00000525878 PRICKLE2Q7Z3G6 844 aa10.16□□□□□ -0.78
CSDE1-210ENST00000525878 ZNF330Q9Y3S2 320 aaPredicted RBP10.16□□□□□ -0.78
CSDE1-210ENST00000525878 APBB1O00213 710 aa10.15□□□□□ -0.78
CSDE1-210ENST00000525878 TPRNQ4KMQ1 711 aa10.15□□□□□ -0.78
CSDE1-210ENST00000525878 ZNF385CQ66K41 422 aaPredicted RBP10.15□□□□□ -0.78
CSDE1-210ENST00000525878 OSBPL3Q9H4L5 887 aa10.15□□□□□ -0.78
CSDE1-210ENST00000525878 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
CSDE1-210ENST00000525878 RHOQP17081 205 aa10.13□□□□□ -0.79
CSDE1-210ENST00000525878 CLN3Q13286 438 aa10.13□□□□□ -0.79
CSDE1-210ENST00000525878 CYP2U1Q7Z449 544 aa10.13□□□□□ -0.79
CSDE1-210ENST00000525878 GRIP2Q9C0E4 1043 aa10.13□□□□□ -0.79
CSDE1-210ENST00000525878 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
CSDE1-210ENST00000525878 MEN1O00255 615 aa10.12□□□□□ -0.79
CSDE1-210ENST00000525878 WHAMMQ8TF30 809 aa10.12□□□□□ -0.79
CSDE1-210ENST00000525878 GMCL1Q96IK5 515 aa10.12□□□□□ -0.79
CSDE1-210ENST00000525878 ADAMTS8Q9UP79 889 aa10.12□□□□□ -0.79
CSDE1-210ENST00000525878 GAS6Q14393 721 aa10.11□□□□□ -0.79
CSDE1-210ENST00000525878 CEP126Q9P2H0 1117 aa10.11□□□□□ -0.79
CSDE1-210ENST00000525878 ARHGEF15O94989 841 aa10.1□□□□□ -0.79
CSDE1-210ENST00000525878 TRIM22Q8IYM9 498 aa10.1□□□□□ -0.79
CSDE1-210ENST00000525878 ZNF837Q96EG3 531 aaPredicted RBP10.1□□□□□ -0.79
CSDE1-210ENST00000525878 DYRK1BQ9Y463 629 aa10.1□□□□□ -0.79
CSDE1-210ENST00000525878 SPATA31C2B4DYI2 1134 aa10.09□□□□□ -0.79
CSDE1-210ENST00000525878 WDR44Q5JSH3 913 aa10.09□□□□□ -0.79
CSDE1-210ENST00000525878 CCDC85AQ96PX6 553 aaPredicted RBP10.09□□□□□ -0.79
CSDE1-210ENST00000525878 TBC1D2BQ9UPU7 963 aa10.09□□□□□ -0.79
CSDE1-210ENST00000525878 SRSF11Q05519 484 aaKnown RBP10.08□□□□□ -0.8
CSDE1-210ENST00000525878 POU4F2Q12837 409 aa10.08□□□□□ -0.8
CSDE1-210ENST00000525878 DBN1Q16643 649 aa10.08□□□□□ -0.8
CSDE1-210ENST00000525878 SVOPQ8N4V2 548 aa10.08□□□□□ -0.8
CSDE1-210ENST00000525878 NLRP3Q96P20 1036 aa10.08□□□□□ -0.8
CSDE1-210ENST00000525878 ARHGEF10LQ9HCE6 1279 aa10.08□□□□□ -0.8
CSDE1-210ENST00000525878 ADAMTS2O95450 1211 aa10.07□□□□□ -0.8
CSDE1-210ENST00000525878 GNRH1P01148 92 aa10.07□□□□□ -0.8
CSDE1-210ENST00000525878 IRF5Q13568 498 aa10.07□□□□□ -0.8
CSDE1-210ENST00000525878 SLC27A3Q5K4L6 730 aa10.07□□□□□ -0.8
CSDE1-210ENST00000525878 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
CSDE1-210ENST00000525878 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
CSDE1-210ENST00000525878 CDCA7Q9BWT1 371 aaPredicted RBP10.07□□□□□ -0.8
CSDE1-210ENST00000525878 HRH3Q9Y5N1 445 aa10.07□□□□□ -0.8
CSDE1-210ENST00000525878 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
CSDE1-210ENST00000525878 LYPD4Q6UWN0 246 aa10.05□□□□□ -0.8
CSDE1-210ENST00000525878 ESYT1Q9BSJ8 1104 aa10.05□□□□□ -0.8
CSDE1-210ENST00000525878 IL2RAP01589 272 aa10.04□□□□□ -0.8
CSDE1-210ENST00000525878 CNKSR1Q969H4 720 aa10.03□□□□□ -0.8
CSDE1-210ENST00000525878 MBIPQ9NS73 344 aa10.03□□□□□ -0.8
CSDE1-210ENST00000525878 CHIC2Q9UKJ5 165 aa10.03□□□□□ -0.8
CSDE1-210ENST00000525878 H7C1W4 665 aa10.02□□□□□ -0.81
CSDE1-210ENST00000525878 RNF225M0QZC1 329 aaPredicted RBP10.02□□□□□ -0.81
CSDE1-210ENST00000525878 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
CSDE1-210ENST00000525878 RASSF7Q02833 373 aa10.02□□□□□ -0.81
CSDE1-210ENST00000525878 CENPCQ03188 943 aa10.02□□□□□ -0.81
CSDE1-210ENST00000525878 TSGA10IPQ3SY00 556 aa10.02□□□□□ -0.81
CSDE1-210ENST00000525878 RIPOR1Q6ZS17 1223 aa10.02□□□□□ -0.81
CSDE1-210ENST00000525878 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.81
CSDE1-210ENST00000525878 XAGE2Q96GT9 111 aa10.02□□□□□ -0.81
CSDE1-210ENST00000525878 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.81
CSDE1-210ENST00000525878 RAB6BQ9NRW1 208 aa10.02□□□□□ -0.81
CSDE1-210ENST00000525878 GPR25O00155 361 aa10.01□□□□□ -0.81
CSDE1-210ENST00000525878 WASLO00401 505 aaPredicted RBP10.01□□□□□ -0.81
CSDE1-210ENST00000525878 MYCP01106 439 aaPredicted RBP10.01□□□□□ -0.81
CSDE1-210ENST00000525878 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
CSDE1-210ENST00000525878 PRM3Q9NNZ6 103 aa10.01□□□□□ -0.81
CSDE1-210ENST00000525878 FOXR1Q6PIV2 292 aa10□□□□□ -0.81
CSDE1-210ENST00000525878 TMEM151AQ8N4L1 468 aa10□□□□□ -0.81
CSDE1-210ENST00000525878 GTPBP3Q969Y2 492 aaKnown RBP10□□□□□ -0.81
CSDE1-210ENST00000525878 GAS2L1Q99501 681 aaPredicted RBP10□□□□□ -0.81
CSDE1-210ENST00000525878 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
CSDE1-210ENST00000525878 TIMMDC1Q9NPL8 285 aa10□□□□□ -0.81
CSDE1-210ENST00000525878 F11P03951 625 aa9.99□□□□□ -0.81
CSDE1-210ENST00000525878 GDF11O95390 407 aa9.98□□□□□ -0.81
CSDE1-210ENST00000525878 THBS1P07996 1170 aa9.98□□□□□ -0.81
CSDE1-210ENST00000525878 KCTD17Q8N5Z5 321 aa9.98□□□□□ -0.81
CSDE1-210ENST00000525878 IGF1RP08069 1367 aa9.98□□□□□ -0.81
CSDE1-210ENST00000525878 USP4Q13107 963 aa9.97□□□□□ -0.81
CSDE1-210ENST00000525878 ZSCAN10Q96SZ4 725 aaPredicted RBP9.97□□□□□ -0.81
CSDE1-210ENST00000525878 DOLKQ9UPQ8 538 aa9.97□□□□□ -0.81
CSDE1-210ENST00000525878 VAC14Q08AM6 782 aa9.96□□□□□ -0.82
CSDE1-210ENST00000525878 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.82
CSDE1-210ENST00000525878 NUCKS1Q9H1E3 243 aaKnown RBP9.96□□□□□ -0.82
CSDE1-210ENST00000525878 GDPD2Q9HCC8 539 aa9.96□□□□□ -0.82
CSDE1-210ENST00000525878 MAP3K10Q02779 954 aa9.95□□□□□ -0.82
CSDE1-210ENST00000525878 ESCO1Q5FWF5 840 aa9.95□□□□□ -0.82
CSDE1-210ENST00000525878 RNF135Q8IUD6 432 aa9.95□□□□□ -0.82
CSDE1-210ENST00000525878 TRERF1Q96PN7 1200 aa9.95□□□□□ -0.82
CSDE1-210ENST00000525878 ETNK1Q9HBU6 452 aa9.95□□□□□ -0.82
CSDE1-210ENST00000525878 A0A1B0GTH6 734 aa9.94□□□□□ -0.82
CSDE1-210ENST00000525878 MARSP56192 900 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms