RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 LYSMD3Q7Z3D4 306 aa6.59□□□□□ -1.35
CSDE1-208ENST00000524652 PRM3Q9NNZ6 103 aa6.59□□□□□ -1.35
CSDE1-208ENST00000524652 CYP2U1Q7Z449 544 aa6.58□□□□□ -1.36
CSDE1-208ENST00000524652 GPR161Q8N6U8 529 aaKnown RBP6.57□□□□□ -1.36
CSDE1-208ENST00000524652 TRAK2O60296 914 aa6.56□□□□□ -1.36
CSDE1-208ENST00000524652 SCTRP47872 440 aa6.56□□□□□ -1.36
CSDE1-208ENST00000524652 KRT76Q01546 638 aa6.56□□□□□ -1.36
CSDE1-208ENST00000524652 TBC1D2BQ9UPU7 963 aa6.56□□□□□ -1.36
CSDE1-208ENST00000524652 PCDHB11Q9Y5F2 797 aa6.56□□□□□ -1.36
CSDE1-208ENST00000524652 A0A1W2PRU2 124 aa6.55□□□□□ -1.36
CSDE1-208ENST00000524652 CLN3Q13286 438 aa6.55□□□□□ -1.36
CSDE1-208ENST00000524652 SV2AQ7L0J3 742 aa6.55□□□□□ -1.36
CSDE1-208ENST00000524652 COL25A1Q9BXS0 654 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-208ENST00000524652 CDC14CA4D256 554 aa6.54□□□□□ -1.36
CSDE1-208ENST00000524652 MEN1O00255 615 aa6.54□□□□□ -1.36
CSDE1-208ENST00000524652 EIF4G2P78344 907 aaKnown RBP eCLIP6.54□□□□□ -1.36
CSDE1-208ENST00000524652 PRICKLE2Q7Z3G6 844 aa6.54□□□□□ -1.36
CSDE1-208ENST00000524652 CNTNAP3BQ96NU0 1288 aa6.54□□□□□ -1.36
CSDE1-208ENST00000524652 CNTNAP3Q9BZ76 1288 aa6.54□□□□□ -1.36
CSDE1-208ENST00000524652 OSBPL3Q9H4L5 887 aa6.54□□□□□ -1.36
CSDE1-208ENST00000524652 ESF1Q9H501 851 aaKnown RBP6.54□□□□□ -1.36
CSDE1-208ENST00000524652 CEP126Q9P2H0 1117 aa6.54□□□□□ -1.36
CSDE1-208ENST00000524652 VWA5B2Q8N398 1253 aa6.53□□□□□ -1.36
CSDE1-208ENST00000524652 GMCL1Q96IK5 515 aa6.53□□□□□ -1.36
CSDE1-208ENST00000524652 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
CSDE1-208ENST00000524652 MYCP01106 439 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-208ENST00000524652 GNRH1P01148 92 aa6.52□□□□□ -1.37
CSDE1-208ENST00000524652 IRF5Q13568 498 aa6.52□□□□□ -1.37
CSDE1-208ENST00000524652 SLC27A3Q5K4L6 730 aa6.52□□□□□ -1.37
CSDE1-208ENST00000524652 RNFT1Q5M7Z0 435 aa6.52□□□□□ -1.37
CSDE1-208ENST00000524652 ARHGEF10LQ9HCE6 1279 aa6.52□□□□□ -1.37
CSDE1-208ENST00000524652 SPATA31C2B4DYI2 1134 aa6.51□□□□□ -1.37
CSDE1-208ENST00000524652 SLURP2P0DP57 97 aa6.51□□□□□ -1.37
CSDE1-208ENST00000524652 WDR44Q5JSH3 913 aa6.51□□□□□ -1.37
CSDE1-208ENST00000524652 CCDC85AQ96PX6 553 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-208ENST00000524652 GRIP2Q9C0E4 1043 aa6.51□□□□□ -1.37
CSDE1-208ENST00000524652 DYRK1BQ9Y463 629 aa6.51□□□□□ -1.37
CSDE1-208ENST00000524652 RHOQP17081 205 aa6.5□□□□□ -1.37
CSDE1-208ENST00000524652 MCM6Q14566 821 aa6.5□□□□□ -1.37
CSDE1-208ENST00000524652 TRIM22Q8IYM9 498 aa6.5□□□□□ -1.37
CSDE1-208ENST00000524652 ESYT1Q9BSJ8 1104 aa6.5□□□□□ -1.37
CSDE1-208ENST00000524652 CUEDC1Q9NWM3 386 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-208ENST00000524652 WASHC4Q2M389 1173 aa6.49□□□□□ -1.37
CSDE1-208ENST00000524652 SLFNL1Q499Z3 407 aa6.49□□□□□ -1.37
CSDE1-208ENST00000524652 NBPF10Q6P3W6 841 aaKnown RBP6.49□□□□□ -1.37
CSDE1-208ENST00000524652 PHTF2Q8N3S3 785 aa6.49□□□□□ -1.37
CSDE1-208ENST00000524652 NBPF15Q8N660 670 aa6.49□□□□□ -1.37
CSDE1-208ENST00000524652 CNKSR1Q969H4 720 aa6.49□□□□□ -1.37
CSDE1-208ENST00000524652 ZNF837Q96EG3 531 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-208ENST00000524652 CDCA7Q9BWT1 371 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-208ENST00000524652 GDPD2Q9HCC8 539 aa6.49□□□□□ -1.37
CSDE1-208ENST00000524652 RAB6BQ9NRW1 208 aa6.49□□□□□ -1.37
CSDE1-208ENST00000524652 DOLKQ9UPQ8 538 aa6.49□□□□□ -1.37
CSDE1-208ENST00000524652 H7C1W4 665 aa6.48□□□□□ -1.37
CSDE1-208ENST00000524652 VAC14Q08AM6 782 aa6.48□□□□□ -1.37
CSDE1-208ENST00000524652 POU4F2Q12837 409 aa6.48□□□□□ -1.37
CSDE1-208ENST00000524652 USP4Q13107 963 aa6.48□□□□□ -1.37
CSDE1-208ENST00000524652 ZNF385CQ66K41 422 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-208ENST00000524652 TAS1R3Q7RTX0 852 aa6.48□□□□□ -1.37
CSDE1-208ENST00000524652 SIRT1Q96EB6 747 aa6.48□□□□□ -1.37
CSDE1-208ENST00000524652 CHIC2Q9UKJ5 165 aa6.48□□□□□ -1.37
CSDE1-208ENST00000524652 WASLO00401 505 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-208ENST00000524652 IL2RAP01589 272 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 SOX11P35716 441 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 ABL2P42684 1182 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 SRSF11Q05519 484 aaKnown RBP6.47□□□□□ -1.37
CSDE1-208ENST00000524652 GAS6Q14393 721 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 ESCO1Q5FWF5 840 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 FOXR1Q6PIV2 292 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 RNF135Q8IUD6 432 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 SVOPQ8N4V2 548 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 HRH3Q9Y5N1 445 aa6.47□□□□□ -1.37
CSDE1-208ENST00000524652 RNF225M0QZC1 329 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-208ENST00000524652 PRKCSHP14314 528 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-208ENST00000524652 CENPCQ03188 943 aa6.46□□□□□ -1.38
CSDE1-208ENST00000524652 RIPOR1Q6ZS17 1223 aa6.46□□□□□ -1.38
CSDE1-208ENST00000524652 MBIPQ9NS73 344 aa6.46□□□□□ -1.38
CSDE1-208ENST00000524652 ADAMTS2O95450 1211 aa6.45□□□□□ -1.38
CSDE1-208ENST00000524652 KCNMA1Q12791 1236 aa6.45□□□□□ -1.38
CSDE1-208ENST00000524652 DBN1Q16643 649 aa6.45□□□□□ -1.38
CSDE1-208ENST00000524652 MAP7D1Q3KQU3 841 aa6.45□□□□□ -1.38
CSDE1-208ENST00000524652 XAGE2Q96GT9 111 aa6.45□□□□□ -1.38
CSDE1-208ENST00000524652 ZSCAN10Q96SZ4 725 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-208ENST00000524652 GAS2L1Q99501 681 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-208ENST00000524652 TIMMDC1Q9NPL8 285 aa6.45□□□□□ -1.38
CSDE1-208ENST00000524652 ADAMTS8Q9UP79 889 aa6.45□□□□□ -1.38
CSDE1-208ENST00000524652 A0A1B0GTH6 734 aa6.44□□□□□ -1.38
CSDE1-208ENST00000524652 F11P03951 625 aa6.44□□□□□ -1.38
CSDE1-208ENST00000524652 GTF2E1P29083 439 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-208ENST00000524652 TSGA10IPQ3SY00 556 aa6.44□□□□□ -1.38
CSDE1-208ENST00000524652 TRERF1Q96PN7 1200 aa6.44□□□□□ -1.38
CSDE1-208ENST00000524652 FHDC1Q9C0D6 1143 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-208ENST00000524652 ARHGEF15O94989 841 aa6.43□□□□□ -1.38
CSDE1-208ENST00000524652 SEMA3FQ13275 785 aa6.43□□□□□ -1.38
CSDE1-208ENST00000524652 OXLD1Q5BKU9 147 aa6.43□□□□□ -1.38
CSDE1-208ENST00000524652 GNASQ5JWF2 1037 aa6.43□□□□□ -1.38
CSDE1-208ENST00000524652 WHAMMQ8TF30 809 aa6.43□□□□□ -1.38
CSDE1-208ENST00000524652 ETNK1Q9HBU6 452 aa6.43□□□□□ -1.38
CSDE1-208ENST00000524652 COG6Q9Y2V7 657 aa6.43□□□□□ -1.38
CSDE1-208ENST00000524652 GPR25O00155 361 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms