RNA–Protein interactions for RNA: ENST00000524553.5

CFL1-202, Transcript of cofilin 1, humanhuman

TSL 2 BASIC

Gene CFL1, Length 860 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-202ENST00000524553 LRRC4BQ9NT99 713 aa23.27■■□□□ 1.32
CFL1-202ENST00000524553 RTL1A6NKG5 1358 aa23.27■■□□□ 1.31
CFL1-202ENST00000524553 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
CFL1-202ENST00000524553 MTFR1LQ9H019 292 aa23.26■■□□□ 1.31
CFL1-202ENST00000524553 MEGF6O75095 1541 aa23.25■■□□□ 1.31
CFL1-202ENST00000524553 HSPA5P11021 654 aaKnown RBP23.25■■□□□ 1.31
CFL1-202ENST00000524553 PRIM1P49642 420 aaKnown RBP23.25■■□□□ 1.31
CFL1-202ENST00000524553 ZNF827Q17R98 1081 aa23.25■■□□□ 1.31
CFL1-202ENST00000524553 NBPF6Q5VWK0 638 aa23.25■■□□□ 1.31
CFL1-202ENST00000524553 NBPF4Q96M43 638 aa23.25■■□□□ 1.31
CFL1-202ENST00000524553 SMG6Q86US8 1419 aaKnown RBP23.23■■□□□ 1.31
CFL1-202ENST00000524553 KCNQ4P56696 695 aa23.21■■□□□ 1.31
CFL1-202ENST00000524553 HSP90AB2PQ58FF8 381 aa23.21■■□□□ 1.31
CFL1-202ENST00000524553 RAPGEF4Q8WZA2 1011 aa23.21■■□□□ 1.31
CFL1-202ENST00000524553 FHDC1Q9C0D6 1143 aaPredicted RBP23.21■■□□□ 1.31
CFL1-202ENST00000524553 SLC27A3Q5K4L6 730 aa23.2■■□□□ 1.3
CFL1-202ENST00000524553 SGIP1Q9BQI5 828 aa23.2■■□□□ 1.3
CFL1-202ENST00000524553 LY75O60449 1722 aa23.19■■□□□ 1.3
CFL1-202ENST00000524553 AKT1S1Q96B36 256 aa23.19■■□□□ 1.3
CFL1-202ENST00000524553 SYT17Q9BSW7 474 aa23.19■■□□□ 1.3
CFL1-202ENST00000524553 CARD14Q9BXL6 1004 aa23.19■■□□□ 1.3
CFL1-202ENST00000524553 TUBGCP6Q96RT7 1819 aa23.19■■□□□ 1.3
CFL1-202ENST00000524553 QSER1Q2KHR3 1735 aa23.19■■□□□ 1.3
CFL1-202ENST00000524553 NSD3Q9BZ95 1437 aa23.18■■□□□ 1.3
CFL1-202ENST00000524553 TATP17735 454 aaPredicted RBP23.18■■□□□ 1.3
CFL1-202ENST00000524553 INSRP06213 1382 aa23.17■■□□□ 1.3
CFL1-202ENST00000524553 FLT4P35916 1363 aa23.17■■□□□ 1.3
CFL1-202ENST00000524553 CGNL1Q0VF96 1302 aa23.17■■□□□ 1.3
CFL1-202ENST00000524553 ARXQ96QS3 562 aa23.17■■□□□ 1.3
CFL1-202ENST00000524553 MAP2P11137 1827 aaKnown RBP23.17■■□□□ 1.3
CFL1-202ENST00000524553 NSD2O96028 1365 aa23.16■■□□□ 1.3
CFL1-202ENST00000524553 TFCP2L1Q9NZI6 479 aa23.16■■□□□ 1.3
CFL1-202ENST00000524553 POLR3GLQ9BT43 218 aa23.15■■□□□ 1.3
CFL1-202ENST00000524553 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
CFL1-202ENST00000524553 PPM1GO15355 546 aaPredicted RBP23.14■■□□□ 1.29
CFL1-202ENST00000524553 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
CFL1-202ENST00000524553 KIF24Q5T7B8 1368 aa23.13■■□□□ 1.29
CFL1-202ENST00000524553 PNPLA7Q6ZV29 1317 aa23.12■■□□□ 1.29
CFL1-202ENST00000524553 SLC16A10Q8TF71 515 aa23.12■■□□□ 1.29
CFL1-202ENST00000524553 PCDH11XQ9BZA7 1347 aa23.11■■□□□ 1.29
CFL1-202ENST00000524553 PCDH11YQ9BZA8 1340 aa23.11■■□□□ 1.29
CFL1-202ENST00000524553 CHD4Q14839 1912 aa23.1■■□□□ 1.29
CFL1-202ENST00000524553 KLHL34Q8N239 644 aa23.1■■□□□ 1.29
CFL1-202ENST00000524553 ITGB4P16144 1822 aa23.1■■□□□ 1.29
CFL1-202ENST00000524553 POLD1P28340 1107 aa23.09■■□□□ 1.29
CFL1-202ENST00000524553 MSH5O43196 834 aa23.08■■□□□ 1.29
CFL1-202ENST00000524553 COL24A1Q17RW2 1714 aa23.08■■□□□ 1.28
CFL1-202ENST00000524553 MPRIPQ6WCQ1 1025 aa23.07■■□□□ 1.28
CFL1-202ENST00000524553 ANKRD26Q9UPS8 1709 aa23.07■■□□□ 1.28
CFL1-202ENST00000524553 PKD1L3Q7Z443 1732 aa23.06■■□□□ 1.28
CFL1-202ENST00000524553 CYP27B1O15528 508 aa23.06■■□□□ 1.28
CFL1-202ENST00000524553 C5P01031 1676 aa23.06■■□□□ 1.28
CFL1-202ENST00000524553 TAF1LQ8IZX4 1826 aa23.05■■□□□ 1.28
CFL1-202ENST00000524553 MAP3K5Q99683 1374 aa23.05■■□□□ 1.28
CFL1-202ENST00000524553 TOGARAM1Q9Y4F4 1720 aa23.05■■□□□ 1.28
CFL1-202ENST00000524553 WASHC2AQ641Q2 1341 aa23.04■■□□□ 1.28
CFL1-202ENST00000524553 TNNT2P45379 298 aaPredicted RBP23.03■■□□□ 1.28
CFL1-202ENST00000524553 COL23A1Q86Y22 540 aaPredicted RBP23.02■■□□□ 1.28
CFL1-202ENST00000524553 EYA1Q99502 592 aa23.02■■□□□ 1.28
CFL1-202ENST00000524553 PALLDQ8WX93 1383 aa23.01■■□□□ 1.27
CFL1-202ENST00000524553 GPR162Q16538 588 aa23.01■■□□□ 1.27
CFL1-202ENST00000524553 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
CFL1-202ENST00000524553 SPG7Q9UQ90 795 aa23.01■■□□□ 1.27
CFL1-202ENST00000524553 NCAPD2Q15021 1401 aa22.99■■□□□ 1.27
CFL1-202ENST00000524553 PELP1Q8IZL8 1130 aaKnown RBP22.99■■□□□ 1.27
CFL1-202ENST00000524553 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
CFL1-202ENST00000524553 MSL1Q68DK7 614 aa22.98■■□□□ 1.27
CFL1-202ENST00000524553 SMARCC1Q92922 1105 aaPredicted RBP22.98■■□□□ 1.27
CFL1-202ENST00000524553 PIGBQ92521 554 aa22.97■■□□□ 1.27
CFL1-202ENST00000524553 HMGB2P26583 209 aaKnown RBP22.96■■□□□ 1.27
CFL1-202ENST00000524553 NKX1-1Q15270 411 aaPredicted RBP22.96■■□□□ 1.27
CFL1-202ENST00000524553 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
CFL1-202ENST00000524553 NLGN2Q8NFZ4 835 aa22.96■■□□□ 1.27
CFL1-202ENST00000524553 PANK3Q9H999 370 aa22.96■■□□□ 1.27
CFL1-202ENST00000524553 UTRNP46939 3433 aa22.95■■□□□ 1.27
CFL1-202ENST00000524553 C4BP0C0L5 1744 aa22.95■■□□□ 1.26
CFL1-202ENST00000524553 EIF4A2Q14240 407 aaKnown RBP22.95■■□□□ 1.26
CFL1-202ENST00000524553 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
CFL1-202ENST00000524553 FLAD1Q8NFF5 587 aa22.93■■□□□ 1.26
CFL1-202ENST00000524553 AK7Q96M32 723 aa22.93■■□□□ 1.26
CFL1-202ENST00000524553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
CFL1-202ENST00000524553 UBR3Q6ZT12 1888 aa22.92■■□□□ 1.26
CFL1-202ENST00000524553 TMOD3Q9NYL9 352 aa22.92■■□□□ 1.26
CFL1-202ENST00000524553 PHKG2P15735 406 aa22.91■■□□□ 1.26
CFL1-202ENST00000524553 PHF14O94880 888 aa22.9■■□□□ 1.26
CFL1-202ENST00000524553 ZNF316A6NFI3 1004 aaPredicted RBP22.89■■□□□ 1.25
CFL1-202ENST00000524553 SMIM5Q71RC9 77 aa22.89■■□□□ 1.25
CFL1-202ENST00000524553 ASAP1Q9ULH1 1129 aa22.89■■□□□ 1.25
CFL1-202ENST00000524553 LOC102724428A0A0B4J2F2 783 aa22.88■■□□□ 1.25
CFL1-202ENST00000524553 SIK1P57059 783 aa22.88■■□□□ 1.25
CFL1-202ENST00000524553 AMIGO3Q86WK7 504 aa22.88■■□□□ 1.25
CFL1-202ENST00000524553 LINC00116Q8NCU8 138 aa22.87■■□□□ 1.25
CFL1-202ENST00000524553 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
CFL1-202ENST00000524553 IGSF1Q8N6C5 1336 aa22.85■■□□□ 1.25
CFL1-202ENST00000524553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.85■■□□□ 1.25
CFL1-202ENST00000524553 ATP6V1AP38606 617 aa22.85■■□□□ 1.25
CFL1-202ENST00000524553 YBX3P16989 372 aaKnown RBP eCLIP22.84■■□□□ 1.252e-9■□□□□ 11.3
CFL1-202ENST00000524553 ATG3Q9NT62 314 aa22.84■■□□□ 1.25
CFL1-202ENST00000524553 ITPK1Q13572 414 aa22.83■■□□□ 1.25
CFL1-202ENST00000524553 PLEKHO1Q53GL0 409 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms