RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 SNRPNP63162 240 aaKnown RBP10.42□□□□□ -0.74
NPM1-212ENST00000524204 CTDSPL2Q05D32 466 aa10.42□□□□□ -0.74
NPM1-212ENST00000524204 ZBTB33Q86T24 672 aa10.41□□□□□ -0.74
NPM1-212ENST00000524204 TRIM66O15016 1216 aa10.39□□□□□ -0.75
NPM1-212ENST00000524204 RAB15P59190 212 aa10.39□□□□□ -0.75
NPM1-212ENST00000524204 FKBPLQ9UIM3 349 aa10.39□□□□□ -0.75
NPM1-212ENST00000524204 LRRN4Q8WUT4 740 aa10.38□□□□□ -0.75
NPM1-212ENST00000524204 GTPBP3Q969Y2 492 aaKnown RBP10.38□□□□□ -0.75
NPM1-212ENST00000524204 ERVH48-1M5A8F1 160 aa10.37□□□□□ -0.75
NPM1-212ENST00000524204 COL8A1P27658 744 aa10.37□□□□□ -0.75
NPM1-212ENST00000524204 RNF144AP50876 292 aaPredicted RBP10.37□□□□□ -0.75
NPM1-212ENST00000524204 RIPOR1Q6ZS17 1223 aa10.37□□□□□ -0.75
NPM1-212ENST00000524204 GMCL1Q96IK5 515 aa10.37□□□□□ -0.75
NPM1-212ENST00000524204 OIP5O43482 229 aa10.36□□□□□ -0.75
NPM1-212ENST00000524204 ZC3H15Q8WU90 426 aaKnown RBP10.36□□□□□ -0.75
NPM1-212ENST00000524204 FOXR1Q6PIV2 292 aa10.35□□□□□ -0.75
NPM1-212ENST00000524204 KRTAP1-3Q8IUG1 177 aa10.35□□□□□ -0.75
NPM1-212ENST00000524204 ADAM32Q8TC27 787 aa10.35□□□□□ -0.75
NPM1-212ENST00000524204 NR6A1Q15406 480 aa10.34□□□□□ -0.75
NPM1-212ENST00000524204 LRRC4BQ9NT99 713 aa10.34□□□□□ -0.75
NPM1-212ENST00000524204 SHISA8B8ZZ34 492 aa10.33□□□□□ -0.76
NPM1-212ENST00000524204 C1orf229Q6ZS94 237 aaPredicted RBP10.33□□□□□ -0.76
NPM1-212ENST00000524204 MX2P20592 715 aa10.32□□□□□ -0.76
NPM1-212ENST00000524204 ITGB7P26010 798 aa10.31□□□□□ -0.76
NPM1-212ENST00000524204 PTK2Q05397 1052 aa10.31□□□□□ -0.76
NPM1-212ENST00000524204 GAS2L1Q99501 681 aaPredicted RBP10.31□□□□□ -0.76
NPM1-212ENST00000524204 CLK2P49760 499 aaKnown RBP10.3□□□□□ -0.76
NPM1-212ENST00000524204 FBXO31Q5XUX0 539 aaPredicted RBP10.3□□□□□ -0.76
NPM1-212ENST00000524204 CYLDQ9NQC7 956 aa10.3□□□□□ -0.76
NPM1-212ENST00000524204 DYRK1BQ9Y463 629 aa10.3□□□□□ -0.76
NPM1-212ENST00000524204 POU4F2Q12837 409 aa10.29□□□□□ -0.76
NPM1-212ENST00000524204 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
NPM1-212ENST00000524204 TRERF1Q96PN7 1200 aa10.28□□□□□ -0.76
NPM1-212ENST00000524204 OXCT2Q9BYC2 517 aaPredicted RBP10.28□□□□□ -0.76
NPM1-212ENST00000524204 POLR3EQ9NVU0 708 aa10.28□□□□□ -0.76
NPM1-212ENST00000524204 ZC3H4Q9UPT8 1303 aaKnown RBP10.28□□□□□ -0.76
NPM1-212ENST00000524204 ESPNB1AK53 854 aa10.27□□□□□ -0.77
NPM1-212ENST00000524204 H7C1W4 665 aa10.27□□□□□ -0.77
NPM1-212ENST00000524204 THBS1P07996 1170 aa10.26□□□□□ -0.77
NPM1-212ENST00000524204 SUV39H2Q9H5I1 410 aa10.26□□□□□ -0.77
NPM1-212ENST00000524204 MKL2Q9ULH7 1088 aa10.26□□□□□ -0.77
NPM1-212ENST00000524204 GPSM3Q9Y4H4 160 aa10.26□□□□□ -0.77
NPM1-212ENST00000524204 MEN1O00255 615 aa10.25□□□□□ -0.77
NPM1-212ENST00000524204 HOXB4P17483 251 aaPredicted RBP10.25□□□□□ -0.77
NPM1-212ENST00000524204 EPS8L1Q8TE68 723 aa10.25□□□□□ -0.77
NPM1-212ENST00000524204 DZIP3Q86Y13 1208 aaKnown RBP10.24□□□□□ -0.77
NPM1-212ENST00000524204 C1QTNF9BB2RNN3 333 aa10.23□□□□□ -0.77
NPM1-212ENST00000524204 ATP5J2-PTCD1G3V325 749 aa10.23□□□□□ -0.77
NPM1-212ENST00000524204 GPC1P35052 558 aa10.23□□□□□ -0.77
NPM1-212ENST00000524204 LINC00114Q6XXX2 140 aa10.23□□□□□ -0.77
NPM1-212ENST00000524204 KLRG1Q96E93 195 aa10.23□□□□□ -0.77
NPM1-212ENST00000524204 AK7Q96M32 723 aa10.23□□□□□ -0.77
NPM1-212ENST00000524204 NSFL1CQ9UNZ2 370 aaKnown RBP10.23□□□□□ -0.77
NPM1-212ENST00000524204 A0A1W2PRU2 124 aa10.22□□□□□ -0.77
NPM1-212ENST00000524204 GRIN2CQ14957 1233 aa10.22□□□□□ -0.77
NPM1-212ENST00000524204 ALYREFQ86V81 257 aaKnown RBP10.22□□□□□ -0.77
NPM1-212ENST00000524204 RRAGCQ9HB90 399 aa10.22□□□□□ -0.77
NPM1-212ENST00000524204 MAP2K3P46734 347 aa10.21□□□□□ -0.77
NPM1-212ENST00000524204 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.77
NPM1-212ENST00000524204 NBPF15Q8N660 670 aa10.21□□□□□ -0.77
NPM1-212ENST00000524204 GRIP2Q9C0E4 1043 aa10.21□□□□□ -0.77
NPM1-212ENST00000524204 NUCKS1Q9H1E3 243 aaKnown RBP10.21□□□□□ -0.77
NPM1-212ENST00000524204 PDE4DQ08499 809 aa10.2□□□□□ -0.78
NPM1-212ENST00000524204 PPP2R2DQ66LE6 453 aa10.2□□□□□ -0.78
NPM1-212ENST00000524204 CD163Q86VB7 1156 aa10.2□□□□□ -0.78
NPM1-212ENST00000524204 EDARADDQ8WWZ3 215 aa10.2□□□□□ -0.78
NPM1-212ENST00000524204 SLC27A3Q5K4L6 730 aa10.18□□□□□ -0.78
NPM1-212ENST00000524204 KRTAP4-12Q9BQ66 201 aa10.18□□□□□ -0.78
NPM1-212ENST00000524204 CHRNA4P43681 627 aa10.17□□□□□ -0.78
NPM1-212ENST00000524204 LCE3BQ5TA77 95 aa10.17□□□□□ -0.78
NPM1-212ENST00000524204 CFHR5Q9BXR6 569 aa10.17□□□□□ -0.78
NPM1-212ENST00000524204 SEMA6BQ9H3T3 888 aa10.17□□□□□ -0.78
NPM1-212ENST00000524204 F11P03951 625 aa10.16□□□□□ -0.78
NPM1-212ENST00000524204 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
NPM1-212ENST00000524204 TIMMDC1Q9NPL8 285 aa10.16□□□□□ -0.78
NPM1-212ENST00000524204 SPATA31C2B4DYI2 1134 aa10.15□□□□□ -0.78
NPM1-212ENST00000524204 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
NPM1-212ENST00000524204 HMX1Q9NP08 348 aaPredicted RBP10.15□□□□□ -0.78
NPM1-212ENST00000524204 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
NPM1-212ENST00000524204 UBAP2LQ14157 1087 aaKnown RBP10.14□□□□□ -0.79
NPM1-212ENST00000524204 DOC2BQ14184 412 aa10.14□□□□□ -0.79
NPM1-212ENST00000524204 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
NPM1-212ENST00000524204 C2CD2LO14523 706 aa10.13□□□□□ -0.79
NPM1-212ENST00000524204 WDR44Q5JSH3 913 aa10.13□□□□□ -0.79
NPM1-212ENST00000524204 NLRP3Q96P20 1036 aa10.13□□□□□ -0.79
NPM1-212ENST00000524204 ZMYM1Q5SVZ6 1142 aa10.12□□□□□ -0.79
NPM1-212ENST00000524204 GDF2Q9UK05 429 aaPredicted RBP10.12□□□□□ -0.79
NPM1-212ENST00000524204 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
NPM1-212ENST00000524204 CLN3Q13286 438 aa10.11□□□□□ -0.79
NPM1-212ENST00000524204 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
NPM1-212ENST00000524204 GPAMQ9HCL2 828 aa10.11□□□□□ -0.79
NPM1-212ENST00000524204 AP1G2O75843 785 aa10.1□□□□□ -0.79
NPM1-212ENST00000524204 ERVK-9P63128 1117 aa10.1□□□□□ -0.79
NPM1-212ENST00000524204 TAS1R3Q7RTX0 852 aa10.1□□□□□ -0.79
NPM1-212ENST00000524204 GOLGA6L1Q8N7Z2 621 aa10.1□□□□□ -0.79
NPM1-212ENST00000524204 AMPD1P23109 780 aa10.09□□□□□ -0.79
NPM1-212ENST00000524204 FOXD4L6Q3SYB3 417 aaPredicted RBP10.09□□□□□ -0.79
NPM1-212ENST00000524204 FOXD4L3Q6VB84 417 aaPredicted RBP10.09□□□□□ -0.79
NPM1-212ENST00000524204 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
NPM1-212ENST00000524204 GNB5O14775 395 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms