RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.85□□□□□ -1.15
NPM1-211ENST00000523622 CXorf56Q9H5V9 222 aa7.85□□□□□ -1.15
NPM1-211ENST00000523622 NLRP2Q9NX02 1062 aa7.85□□□□□ -1.15
NPM1-211ENST00000523622 SMC3Q9UQE7 1217 aa7.85□□□□□ -1.15
NPM1-211ENST00000523622 DIS3Q9Y2L1 958 aaKnown RBP7.85□□□□□ -1.15
NPM1-211ENST00000523622 U3KPZ7 1027 aaPredicted RBP7.85□□□□□ -1.15
NPM1-211ENST00000523622 ATICP31939 592 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 AMPD3Q01432 767 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 ODR4Q5SWX8 454 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 PPP1R18Q6NYC8 613 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 HSCBQ8IWL3 235 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 VPS37AQ8NEZ2 397 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 CEP89Q96ST8 783 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.84□□□□□ -1.15
NPM1-211ENST00000523622 OSBPL2Q9H1P3 480 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 CAPN10Q9HC96 672 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 POLR3EQ9NVU0 708 aa7.84□□□□□ -1.15
NPM1-211ENST00000523622 PALM3A6NDB9 673 aaPredicted RBP7.83□□□□□ -1.16
NPM1-211ENST00000523622 FOSP01100 380 aaPredicted RBP7.83□□□□□ -1.16
NPM1-211ENST00000523622 GNALP38405 381 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 RFC5P40937 340 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 NFE2L2Q16236 605 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 LONRF1Q17RB8 773 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 ALDH1L2Q3SY69 923 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 APBA2Q99767 749 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 IER2Q9BTL4 223 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 YY1AP1Q9H869 796 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 LZTS1Q9Y250 596 aa7.83□□□□□ -1.16
NPM1-211ENST00000523622 DYTNA2CJ06 578 aa7.82□□□□□ -1.16
NPM1-211ENST00000523622 IPO8O15397 1037 aaKnown RBP7.82□□□□□ -1.16
NPM1-211ENST00000523622 RRM1P23921 792 aa7.82□□□□□ -1.16
NPM1-211ENST00000523622 NEUROD1Q13562 356 aa7.82□□□□□ -1.16
NPM1-211ENST00000523622 VPS72Q15906 364 aa7.82□□□□□ -1.16
NPM1-211ENST00000523622 SYCP2LQ5T4T6 812 aa7.82□□□□□ -1.16
NPM1-211ENST00000523622 KRT77Q7Z794 578 aa7.82□□□□□ -1.16
NPM1-211ENST00000523622 CHPFQ8IZ52 775 aa7.82□□□□□ -1.16
NPM1-211ENST00000523622 ALDH8A1Q9H2A2 487 aaPredicted RBP7.82□□□□□ -1.16
NPM1-211ENST00000523622 NCKAP5LQ9HCH0 1330 aa7.81□□□□□ -1.16
NPM1-211ENST00000523622 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
NPM1-211ENST00000523622 MTA2O94776 668 aa7.81□□□□□ -1.16
NPM1-211ENST00000523622 TNNT2P45379 298 aaPredicted RBP7.81□□□□□ -1.16
NPM1-211ENST00000523622 LDLRAD1Q5T700 205 aa7.81□□□□□ -1.16
NPM1-211ENST00000523622 KANK3Q6NY19 840 aa7.81□□□□□ -1.16
NPM1-211ENST00000523622 METTL16Q86W50 562 aaKnown RBP7.81□□□□□ -1.16
NPM1-211ENST00000523622 OGFOD1Q8N543 542 aa7.81□□□□□ -1.16
NPM1-211ENST00000523622 CCDC89Q8N998 374 aa7.81□□□□□ -1.16
NPM1-211ENST00000523622 PRPF38AQ8NAV1 312 aaKnown RBP7.81□□□□□ -1.16
NPM1-211ENST00000523622 TSR2Q969E8 191 aaKnown RBP7.81□□□□□ -1.16
NPM1-211ENST00000523622 CCDC47Q96A33 483 aaKnown RBP7.81□□□□□ -1.16
NPM1-211ENST00000523622 BIN2Q9UBW5 565 aaPredicted RBP7.81□□□□□ -1.16
NPM1-211ENST00000523622 ODF2LQ9ULJ1 636 aa7.81□□□□□ -1.16
NPM1-211ENST00000523622 THRAP3Q9Y2W1 955 aaKnown RBP7.81□□□□□ -1.16
NPM1-211ENST00000523622 PLIN1O60240 522 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 PPP1R37O75864 691 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 HSP90AB1P08238 724 aaKnown RBP7.8□□□□□ -1.16
NPM1-211ENST00000523622 RGS3P49796 1198 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 NUBP1P53384 320 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 SATB1Q01826 763 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 SIM2Q14190 667 aaPredicted RBP7.8□□□□□ -1.16
NPM1-211ENST00000523622 SAMD3Q8N6K7 520 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 FRMD6Q96NE9 622 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 GMLQ99445 158 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 LARP6Q9BRS8 491 aaKnown RBP7.8□□□□□ -1.16
NPM1-211ENST00000523622 CHST12Q9NRB3 414 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 TYW1Q9NV66 732 aaKnown RBP7.8□□□□□ -1.16
NPM1-211ENST00000523622 RBM28Q9NW13 759 aaKnown RBP7.8□□□□□ -1.16
NPM1-211ENST00000523622 SLC45A1Q9Y2W3 748 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 EID1Q9Y6B2 187 aa7.8□□□□□ -1.16
NPM1-211ENST00000523622 TBX3O15119 743 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 RBP3P10745 1247 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 NAT1P18440 290 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 DNAJA1P31689 397 aaKnown RBP7.79□□□□□ -1.16
NPM1-211ENST00000523622 SERPINB4P48594 390 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 RAPGEF1Q13905 1077 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 MRPL58Q14197 206 aaKnown RBP7.79□□□□□ -1.16
NPM1-211ENST00000523622 CCDC93Q567U6 631 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 SOGA3Q5TF21 947 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
NPM1-211ENST00000523622 MSL1Q68DK7 614 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 ANKRD13BQ86YJ7 626 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 RAVER1Q8IY67 606 aaKnown RBP7.79□□□□□ -1.16
NPM1-211ENST00000523622 RELTQ969Z4 430 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 BORCS6Q96GS4 357 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 RANBP17Q9H2T7 1088 aaKnown RBP7.79□□□□□ -1.16
NPM1-211ENST00000523622 AS3MTQ9HBK9 375 aa7.79□□□□□ -1.16
NPM1-211ENST00000523622 ENPP3O14638 875 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 KIF3BO15066 747 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 NPHP1O15259 732 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 CLK1P49759 484 aaKnown RBP7.78□□□□□ -1.16
NPM1-211ENST00000523622 SKAP1Q86WV1 359 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 WDR75Q8IWA0 830 aaKnown RBP7.78□□□□□ -1.16
NPM1-211ENST00000523622 LMNTD2Q8IXW0 634 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 GOLGA1Q92805 767 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 ITFG2Q969R8 447 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 PAIP2Q9BPZ3 127 aaKnown RBP7.78□□□□□ -1.16
NPM1-211ENST00000523622 FAM13BQ9NYF5 915 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 ACAD8Q9UKU7 415 aa7.78□□□□□ -1.16
NPM1-211ENST00000523622 CCDC163A0A0D9SF12 145 aa7.77□□□□□ -1.17
NPM1-211ENST00000523622 TNFRSF10BO14763 440 aa7.77□□□□□ -1.17
NPM1-211ENST00000523622 RNASEH2AO75792 299 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms