RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 LRRC4BQ9NT99 713 aa16.31■□□□□ 0.2
CTNNA1-237ENST00000523275 CASZ1Q86V15 1759 aa16.31■□□□□ 0.2
CTNNA1-237ENST00000523275 NSD3Q9BZ95 1437 aa16.3■□□□□ 0.2
CTNNA1-237ENST00000523275 FLT4P35916 1363 aa16.3■□□□□ 0.2
CTNNA1-237ENST00000523275 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
CTNNA1-237ENST00000523275 ADRA2BP18089 450 aa16.3■□□□□ 0.2
CTNNA1-237ENST00000523275 MTFR1LQ9H019 292 aa16.3■□□□□ 0.2
CTNNA1-237ENST00000523275 MEGF6O75095 1541 aa16.29■□□□□ 0.2
CTNNA1-237ENST00000523275 BTAF1O14981 1849 aa16.29■□□□□ 0.2
CTNNA1-237ENST00000523275 TATP17735 454 aaPredicted RBP16.29■□□□□ 0.2
CTNNA1-237ENST00000523275 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
CTNNA1-237ENST00000523275 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
CTNNA1-237ENST00000523275 EMILIN1Q9Y6C2 1016 aa16.28■□□□□ 0.2
CTNNA1-237ENST00000523275 PPM1GO15355 546 aaPredicted RBP16.27■□□□□ 0.2
CTNNA1-237ENST00000523275 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
CTNNA1-237ENST00000523275 RGPD2P0DJD1 1756 aa16.26■□□□□ 0.19
CTNNA1-237ENST00000523275 EIF4G2P78344 907 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■□□ 17.4
CTNNA1-237ENST00000523275 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
CTNNA1-237ENST00000523275 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
CTNNA1-237ENST00000523275 KCNQ4P56696 695 aa16.25■□□□□ 0.19
CTNNA1-237ENST00000523275 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
CTNNA1-237ENST00000523275 NSD2O96028 1365 aa16.25■□□□□ 0.19
CTNNA1-237ENST00000523275 MYOM1P52179 1685 aa16.24■□□□□ 0.19
CTNNA1-237ENST00000523275 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
CTNNA1-237ENST00000523275 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
CTNNA1-237ENST00000523275 PAPPAQ13219 1627 aa16.24■□□□□ 0.19
CTNNA1-237ENST00000523275 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
CTNNA1-237ENST00000523275 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
CTNNA1-237ENST00000523275 SLC16A10Q8TF71 515 aa16.23■□□□□ 0.19
CTNNA1-237ENST00000523275 SYT17Q9BSW7 474 aa16.23■□□□□ 0.19
CTNNA1-237ENST00000523275 FHDC1Q9C0D6 1143 aaPredicted RBP16.23■□□□□ 0.19
CTNNA1-237ENST00000523275 TFCP2L1Q9NZI6 479 aa16.23■□□□□ 0.19
CTNNA1-237ENST00000523275 CCNL1Q9UK58 526 aaPredicted RBP16.23■□□□□ 0.19
CTNNA1-237ENST00000523275 YY1P25490 414 aa16.22■□□□□ 0.19
CTNNA1-237ENST00000523275 ARXQ96QS3 562 aa16.22■□□□□ 0.19
CTNNA1-237ENST00000523275 POLKQ9UBT6 870 aa16.22■□□□□ 0.19
CTNNA1-237ENST00000523275 CYP27B1O15528 508 aa16.21■□□□□ 0.19
CTNNA1-237ENST00000523275 SHANK3Q9BYB0 1731 aa16.21■□□□□ 0.19
CTNNA1-237ENST00000523275 PNPLA7Q6ZV29 1317 aa16.2■□□□□ 0.18
CTNNA1-237ENST00000523275 DOT1LQ8TEK3 1739 aa16.2■□□□□ 0.18
CTNNA1-237ENST00000523275 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
CTNNA1-237ENST00000523275 EYA1Q99502 592 aa16.2■□□□□ 0.18
CTNNA1-237ENST00000523275 MPRIPQ6WCQ1 1025 aa16.19■□□□□ 0.18
CTNNA1-237ENST00000523275 PANK3Q9H999 370 aa16.19■□□□□ 0.18
CTNNA1-237ENST00000523275 SPG7Q9UQ90 795 aa16.19■□□□□ 0.18
CTNNA1-237ENST00000523275 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
CTNNA1-237ENST00000523275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.183e-8■□□□□ 9.5
CTNNA1-237ENST00000523275 POLD1P28340 1107 aa16.17■□□□□ 0.18
CTNNA1-237ENST00000523275 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
CTNNA1-237ENST00000523275 NCAPD2Q15021 1401 aa16.17■□□□□ 0.18
CTNNA1-237ENST00000523275 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
CTNNA1-237ENST00000523275 LY75O60449 1722 aa16.16■□□□□ 0.18
CTNNA1-237ENST00000523275 MSH5O43196 834 aa16.15■□□□□ 0.18
CTNNA1-237ENST00000523275 EIF4A2Q14240 407 aaKnown RBP16.15■□□□□ 0.18
CTNNA1-237ENST00000523275 PALLDQ8WX93 1383 aa16.14■□□□□ 0.17
CTNNA1-237ENST00000523275 MAP3K5Q99683 1374 aa16.14■□□□□ 0.17
CTNNA1-237ENST00000523275 COL23A1Q86Y22 540 aaPredicted RBP16.14■□□□□ 0.17
CTNNA1-237ENST00000523275 PIGBQ92521 554 aa16.14■□□□□ 0.17
CTNNA1-237ENST00000523275 MAP2P11137 1827 aaKnown RBP16.14■□□□□ 0.17
CTNNA1-237ENST00000523275 ANKRD26Q9UPS8 1709 aa16.14■□□□□ 0.17
CTNNA1-237ENST00000523275 QSER1Q2KHR3 1735 aa16.12■□□□□ 0.17
CTNNA1-237ENST00000523275 MORC1Q86VD1 984 aa16.12■□□□□ 0.17
CTNNA1-237ENST00000523275 IFNL2Q8IZJ0 200 aa16.12■□□□□ 0.17
CTNNA1-237ENST00000523275 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
CTNNA1-237ENST00000523275 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
CTNNA1-237ENST00000523275 PHKG2P15735 406 aa16.11■□□□□ 0.17
CTNNA1-237ENST00000523275 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
CTNNA1-237ENST00000523275 KNSTRNQ9Y448 316 aa16.11■□□□□ 0.17
CTNNA1-237ENST00000523275 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
CTNNA1-237ENST00000523275 GPR162Q16538 588 aa16.09■□□□□ 0.17
CTNNA1-237ENST00000523275 IGSF1Q8N6C5 1336 aa16.09■□□□□ 0.17
CTNNA1-237ENST00000523275 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.16
CTNNA1-237ENST00000523275 SIK1P57059 783 aa16.08■□□□□ 0.16
CTNNA1-237ENST00000523275 AK7Q96M32 723 aa16.08■□□□□ 0.16
CTNNA1-237ENST00000523275 PLEKHG2Q9H7P9 1386 aa16.08■□□□□ 0.16
CTNNA1-237ENST00000523275 TUBGCP6Q96RT7 1819 aa16.08■□□□□ 0.16
CTNNA1-237ENST00000523275 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
CTNNA1-237ENST00000523275 MSL1Q68DK7 614 aa16.07■□□□□ 0.16
CTNNA1-237ENST00000523275 ASAP1Q9ULH1 1129 aa16.07■□□□□ 0.16
CTNNA1-237ENST00000523275 TOGARAM1Q9Y4F4 1720 aa16.07■□□□□ 0.16
CTNNA1-237ENST00000523275 ITGB4P16144 1822 aa16.06■□□□□ 0.16
CTNNA1-237ENST00000523275 COL24A1Q17RW2 1714 aa16.06■□□□□ 0.16
CTNNA1-237ENST00000523275 C5P01031 1676 aa16.05■□□□□ 0.16
CTNNA1-237ENST00000523275 ERVV-2B6SEH9 535 aa16.05■□□□□ 0.16
CTNNA1-237ENST00000523275 HSP90AB1P08238 724 aaKnown RBP16.05■□□□□ 0.16
CTNNA1-237ENST00000523275 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
CTNNA1-237ENST00000523275 NLGN2Q8NFZ4 835 aa16.05■□□□□ 0.16
CTNNA1-237ENST00000523275 DCAF5Q96JK2 942 aa16.05■□□□□ 0.16
CTNNA1-237ENST00000523275 ATG3Q9NT62 314 aa16.05■□□□□ 0.16
CTNNA1-237ENST00000523275 KIF7Q2M1P5 1343 aa16.04■□□□□ 0.16
CTNNA1-237ENST00000523275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-237ENST00000523275 ATP6V1AP38606 617 aa16.04■□□□□ 0.16
CTNNA1-237ENST00000523275 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
CTNNA1-237ENST00000523275 LINC00116Q8NCU8 138 aa16.04■□□□□ 0.16
CTNNA1-237ENST00000523275 PHF14O94880 888 aa16.03■□□□□ 0.16
CTNNA1-237ENST00000523275 ITPK1Q13572 414 aa16.03■□□□□ 0.16
CTNNA1-237ENST00000523275 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
CTNNA1-237ENST00000523275 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
CTNNA1-237ENST00000523275 AMIGO3Q86WK7 504 aa16.03■□□□□ 0.16
CTNNA1-237ENST00000523275 AEBP1Q8IUX7 1158 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms