RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
PCM1-218ENST00000523055 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
PCM1-218ENST00000523055 USP31Q70CQ4 1352 aa21.1■□□□□ 0.97
PCM1-218ENST00000523055 POLD1P28340 1107 aa21.1■□□□□ 0.97
PCM1-218ENST00000523055 NLRP2Q9NX02 1062 aa21.1■□□□□ 0.97
PCM1-218ENST00000523055 KCNQ4P56696 695 aa21.09■□□□□ 0.97
PCM1-218ENST00000523055 SLC27A3Q5K4L6 730 aa21.09■□□□□ 0.97
PCM1-218ENST00000523055 TERF2IPQ9NYB0 399 aa21.09■□□□□ 0.97
PCM1-218ENST00000523055 KIF20BQ96Q89 1820 aa21.08■□□□□ 0.96
PCM1-218ENST00000523055 SLC24A1O60721 1099 aa21.06■□□□□ 0.96
PCM1-218ENST00000523055 ANKRD36BQ8N2N9 1353 aa21.06■□□□□ 0.96
PCM1-218ENST00000523055 ANKRD24Q8TF21 1146 aa21.05■□□□□ 0.96
PCM1-218ENST00000523055 ATP10DQ9P241 1426 aa21.05■□□□□ 0.96
PCM1-218ENST00000523055 TFCP2L1Q9NZI6 479 aa21.04■□□□□ 0.96
PCM1-218ENST00000523055 NSD2O96028 1365 aa21.04■□□□□ 0.96
PCM1-218ENST00000523055 GRIN3BO60391 1043 aa21.04■□□□□ 0.96
PCM1-218ENST00000523055 HSPA5P11021 654 aaKnown RBP21.03■□□□□ 0.96
PCM1-218ENST00000523055 LY75O60449 1722 aa21.02■□□□□ 0.96
PCM1-218ENST00000523055 ADCY9O60503 1353 aa21.01■□□□□ 0.95
PCM1-218ENST00000523055 EIF4G2P78344 907 aaKnown RBP eCLIP21■□□□□ 0.95
PCM1-218ENST00000523055 COL23A1Q86Y22 540 aaPredicted RBP21■□□□□ 0.95
PCM1-218ENST00000523055 DDX54Q8TDD1 881 aaKnown RBP21■□□□□ 0.95
PCM1-218ENST00000523055 PRIM1P49642 420 aaKnown RBP20.99■□□□□ 0.95
PCM1-218ENST00000523055 CDCA8Q53HL2 280 aa20.98■□□□□ 0.95
PCM1-218ENST00000523055 HSPA6P17066 643 aa20.97■□□□□ 0.95
PCM1-218ENST00000523055 DOT1LQ8TEK3 1739 aa20.96■□□□□ 0.95
PCM1-218ENST00000523055 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
PCM1-218ENST00000523055 RGPD2P0DJD1 1756 aa20.96■□□□□ 0.95
PCM1-218ENST00000523055 FBLN1P23142 703 aa20.95■□□□□ 0.94
PCM1-218ENST00000523055 SYTL4Q96C24 671 aaPredicted RBP20.95■□□□□ 0.94
PCM1-218ENST00000523055 GPBP1L1Q9HC44 474 aaPredicted RBP20.95■□□□□ 0.94
PCM1-218ENST00000523055 NSD3Q9BZ95 1437 aa20.94■□□□□ 0.94
PCM1-218ENST00000523055 MSL1Q68DK7 614 aa20.94■□□□□ 0.94
PCM1-218ENST00000523055 IP6K1Q92551 441 aa20.94■□□□□ 0.94
PCM1-218ENST00000523055 CARD14Q9BXL6 1004 aa20.94■□□□□ 0.94
PCM1-218ENST00000523055 GGNBP2Q9H3C7 697 aa20.94■□□□□ 0.94
PCM1-218ENST00000523055 CCNL1Q9UK58 526 aaPredicted RBP20.94■□□□□ 0.94
PCM1-218ENST00000523055 FAM208AQ9UK61 1670 aaKnown RBP20.92■□□□□ 0.94
PCM1-218ENST00000523055 FYB1O15117 783 aa20.92■□□□□ 0.94
PCM1-218ENST00000523055 COG3Q96JB2 828 aa20.92■□□□□ 0.94
PCM1-218ENST00000523055 CD2APQ9Y5K6 639 aa20.92■□□□□ 0.94
PCM1-218ENST00000523055 ANKRD26Q9UPS8 1709 aa20.91■□□□□ 0.94
PCM1-218ENST00000523055 MEGF6O75095 1541 aa20.9■□□□□ 0.94
PCM1-218ENST00000523055 MSH5O43196 834 aa20.89■□□□□ 0.94
PCM1-218ENST00000523055 ZNF526Q8TF50 670 aaPredicted RBP20.89■□□□□ 0.94
PCM1-218ENST00000523055 LTV1Q96GA3 475 aaPredicted RBP20.89■□□□□ 0.94
PCM1-218ENST00000523055 MAP2P11137 1827 aaKnown RBP20.88■□□□□ 0.93
PCM1-218ENST00000523055 MAP3K19Q56UN5 1328 aa20.88■□□□□ 0.93
PCM1-218ENST00000523055 KIF3CO14782 793 aa20.87■□□□□ 0.93
PCM1-218ENST00000523055 ZCRB1Q8TBF4 217 aaKnown RBP20.87■□□□□ 0.93
PCM1-218ENST00000523055 RRS1Q15050 365 aaKnown RBP20.86■□□□□ 0.93
PCM1-218ENST00000523055 AMIGO3Q86WK7 504 aa20.86■□□□□ 0.93
PCM1-218ENST00000523055 C5P01031 1676 aa20.84■□□□□ 0.93
PCM1-218ENST00000523055 HOXC9P31274 260 aa20.84■□□□□ 0.93
PCM1-218ENST00000523055 TAF1LQ8IZX4 1826 aa20.83■□□□□ 0.92
PCM1-218ENST00000523055 TOGARAM1Q9Y4F4 1720 aa20.81■□□□□ 0.92
PCM1-218ENST00000523055 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
PCM1-218ENST00000523055 DNAJC5GQ8N7S2 189 aa20.8■□□□□ 0.92
PCM1-218ENST00000523055 WWC3Q9ULE0 1092 aa20.8■□□□□ 0.92
PCM1-218ENST00000523055 KIF7Q2M1P5 1343 aa20.8■□□□□ 0.92
PCM1-218ENST00000523055 AMPHP49418 695 aa20.79■□□□□ 0.92
PCM1-218ENST00000523055 NBPF6Q5VWK0 638 aa20.79■□□□□ 0.92
PCM1-218ENST00000523055 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
PCM1-218ENST00000523055 NBPF4Q96M43 638 aa20.79■□□□□ 0.92
PCM1-218ENST00000523055 PANK3Q9H999 370 aa20.79■□□□□ 0.92
PCM1-218ENST00000523055 RTL1A6NKG5 1358 aa20.79■□□□□ 0.92
PCM1-218ENST00000523055 FLAD1Q8NFF5 587 aa20.78■□□□□ 0.92
PCM1-218ENST00000523055 CGNL1Q0VF96 1302 aa20.78■□□□□ 0.92
PCM1-218ENST00000523055 PALLDQ8WX93 1383 aa20.77■□□□□ 0.92
PCM1-218ENST00000523055 CICQ96RK0 1608 aaPredicted RBP20.77■□□□□ 0.91
PCM1-218ENST00000523055 C4BP0C0L5 1744 aa20.76■□□□□ 0.91
PCM1-218ENST00000523055 USHBP1Q8N6Y0 703 aa20.76■□□□□ 0.91
PCM1-218ENST00000523055 EMILIN1Q9Y6C2 1016 aa20.76■□□□□ 0.91
PCM1-218ENST00000523055 UBR3Q6ZT12 1888 aa20.75■□□□□ 0.91
PCM1-218ENST00000523055 FLT4P35916 1363 aa20.74■□□□□ 0.91
PCM1-218ENST00000523055 APLP1P51693 650 aa20.74■□□□□ 0.91
PCM1-218ENST00000523055 HSP90AB2PQ58FF8 381 aa20.74■□□□□ 0.91
PCM1-218ENST00000523055 INSRP06213 1382 aa20.72■□□□□ 0.91
PCM1-218ENST00000523055 PCNTO95613 3336 aa20.72■□□□□ 0.91
PCM1-218ENST00000523055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.71■□□□□ 0.91
PCM1-218ENST00000523055 CYP27B1O15528 508 aa20.71■□□□□ 0.91
PCM1-218ENST00000523055 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
PCM1-218ENST00000523055 MPRIPQ6WCQ1 1025 aa20.71■□□□□ 0.91
PCM1-218ENST00000523055 PPM1GO15355 546 aaPredicted RBP20.7■□□□□ 0.9
PCM1-218ENST00000523055 PHF14O94880 888 aa20.7■□□□□ 0.9
PCM1-218ENST00000523055 RAPGEF4Q8WZA2 1011 aa20.7■□□□□ 0.9
PCM1-218ENST00000523055 AK7Q96M32 723 aa20.7■□□□□ 0.9
PCM1-218ENST00000523055 SMG6Q86US8 1419 aaKnown RBP20.69■□□□□ 0.9
PCM1-218ENST00000523055 KIAA1551Q9HCM1 1747 aa20.69■□□□□ 0.9
PCM1-218ENST00000523055 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
PCM1-218ENST00000523055 ITGB4P16144 1822 aa20.69■□□□□ 0.9
PCM1-218ENST00000523055 TOMM70O94826 608 aa20.69■□□□□ 0.9
PCM1-218ENST00000523055 WASHC2AQ641Q2 1341 aa20.68■□□□□ 0.9
PCM1-218ENST00000523055 PCDH11XQ9BZA7 1347 aa20.68■□□□□ 0.9
PCM1-218ENST00000523055 PCDH11YQ9BZA8 1340 aa20.68■□□□□ 0.9
PCM1-218ENST00000523055 PXDNLA1KZ92 1463 aa20.67■□□□□ 0.9
PCM1-218ENST00000523055 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
PCM1-218ENST00000523055 HMGB2P26583 209 aaKnown RBP20.67■□□□□ 0.9
PCM1-218ENST00000523055 SSFA2P28290 1259 aa20.67■□□□□ 0.9
PCM1-218ENST00000523055 LINC00116Q8NCU8 138 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms