RNA–Protein interactions for RNA: ENST00000522563.5

NSMCE2-210, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NSMCE2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-210ENST00000522563 TBC1D9Q6ZT07 1266 aa11.73□□□□□ -0.53
NSMCE2-210ENST00000522563 RELBQ01201 579 aa11.72□□□□□ -0.53
NSMCE2-210ENST00000522563 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
NSMCE2-210ENST00000522563 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
NSMCE2-210ENST00000522563 ZFP42Q96MM3 310 aa11.72□□□□□ -0.53
NSMCE2-210ENST00000522563 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
NSMCE2-210ENST00000522563 ARID3CA6NKF2 412 aa11.71□□□□□ -0.53
NSMCE2-210ENST00000522563 ADH1AP07327 375 aa11.71□□□□□ -0.53
NSMCE2-210ENST00000522563 DEPDC4Q8N2C3 294 aa11.7□□□□□ -0.54
NSMCE2-210ENST00000522563 BMP2P12643 396 aa11.69□□□□□ -0.54
NSMCE2-210ENST00000522563 TSEN34Q9BSV6 310 aaKnown RBP11.69□□□□□ -0.54
NSMCE2-210ENST00000522563 ZNF395Q9H8N7 513 aaPredicted RBP11.69□□□□□ -0.54
NSMCE2-210ENST00000522563 SNRPBP14678 240 aaKnown RBP11.68□□□□□ -0.54
NSMCE2-210ENST00000522563 SCARF1Q14162 830 aa11.68□□□□□ -0.54
NSMCE2-210ENST00000522563 MAP7D1Q3KQU3 841 aa11.68□□□□□ -0.54
NSMCE2-210ENST00000522563 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
NSMCE2-210ENST00000522563 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
NSMCE2-210ENST00000522563 STAU1O95793 577 aaKnown RBP11.67□□□□□ -0.54
NSMCE2-210ENST00000522563 PTGIRP43119 386 aa11.67□□□□□ -0.54
NSMCE2-210ENST00000522563 NCOA4Q13772 614 aa11.67□□□□□ -0.54
NSMCE2-210ENST00000522563 TFIP11Q9UBB9 837 aaKnown RBP11.67□□□□□ -0.54
NSMCE2-210ENST00000522563 ATP9BO43861 1147 aa11.66□□□□□ -0.54
NSMCE2-210ENST00000522563 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 SPINT1O43278 529 aa11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 UPP2O95045 317 aa11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 MYCP01106 439 aaPredicted RBP11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 USP4Q13107 963 aa11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 ZNF787Q6DD87 383 aa11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 TRIM47Q96LD4 638 aa11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 INSM2Q96T92 566 aaPredicted RBP11.65□□□□□ -0.54
NSMCE2-210ENST00000522563 SOBPA7XYQ1 873 aa11.64□□□□□ -0.55
NSMCE2-210ENST00000522563 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
NSMCE2-210ENST00000522563 PPP1R12CQ9BZL4 782 aa11.64□□□□□ -0.55
NSMCE2-210ENST00000522563 USP17L3A6NCW0 530 aa11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 USP17L4A6NCW7 530 aa11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 CTSOP43234 321 aaPredicted RBP11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 USP17L2Q6R6M4 530 aa11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 ESF1Q9H501 851 aaKnown RBP11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 C1orf115Q9H7X2 142 aa11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 SENP2Q9HC62 589 aa11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 RAB6BQ9NRW1 208 aa11.63□□□□□ -0.55
NSMCE2-210ENST00000522563 EML3Q32P44 896 aa11.62□□□□□ -0.55
NSMCE2-210ENST00000522563 CYP2U1Q7Z449 544 aa11.62□□□□□ -0.55
NSMCE2-210ENST00000522563 ARHGEF10LQ9HCE6 1279 aa11.62□□□□□ -0.55
NSMCE2-210ENST00000522563 MAFBQ9Y5Q3 323 aaPredicted RBP11.62□□□□□ -0.55
NSMCE2-210ENST00000522563 ZCCHC6Q5VYS8 1495 aaKnown RBP11.62□□□□□ -0.55
NSMCE2-210ENST00000522563 SOS2Q07890 1332 aaPredicted RBP11.61□□□□□ -0.55
NSMCE2-210ENST00000522563 A0A1W2PRU2 124 aa11.61□□□□□ -0.55
NSMCE2-210ENST00000522563 PLEKHM2Q8IWE5 1019 aa11.6□□□□□ -0.55
NSMCE2-210ENST00000522563 TRIM52Q96A61 297 aa11.6□□□□□ -0.55
NSMCE2-210ENST00000522563 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
NSMCE2-210ENST00000522563 PCDHGA11Q9Y5H2 935 aa11.6□□□□□ -0.55
NSMCE2-210ENST00000522563 FIGNL2A6NMB9 653 aa11.59□□□□□ -0.55
NSMCE2-210ENST00000522563 MEN1O00255 615 aa11.59□□□□□ -0.55
NSMCE2-210ENST00000522563 CFAP70Q5T0N1 1121 aa11.59□□□□□ -0.55
NSMCE2-210ENST00000522563 SIRT1Q96EB6 747 aa11.59□□□□□ -0.55
NSMCE2-210ENST00000522563 POLMQ9NP87 494 aaPredicted RBP11.59□□□□□ -0.55
NSMCE2-210ENST00000522563 DNMT3LQ9UJW3 386 aa11.59□□□□□ -0.55
NSMCE2-210ENST00000522563 NOD1Q9Y239 953 aa11.59□□□□□ -0.55
NSMCE2-210ENST00000522563 DCAF1Q9Y4B6 1507 aa11.59□□□□□ -0.55
NSMCE2-210ENST00000522563 TTLL8A6PVC2 850 aa11.58□□□□□ -0.56
NSMCE2-210ENST00000522563 IL2RAP01589 272 aa11.58□□□□□ -0.56
NSMCE2-210ENST00000522563 FOXD4L5Q5VV16 416 aaPredicted RBP11.58□□□□□ -0.56
NSMCE2-210ENST00000522563 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
NSMCE2-210ENST00000522563 GNRH1P01148 92 aa11.57□□□□□ -0.56
NSMCE2-210ENST00000522563 LMOD1P29536 600 aaPredicted RBP11.57□□□□□ -0.56
NSMCE2-210ENST00000522563 GTF2IP78347 998 aa11.57□□□□□ -0.56
NSMCE2-210ENST00000522563 ETNK1Q9HBU6 452 aa11.57□□□□□ -0.56
NSMCE2-210ENST00000522563 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
NSMCE2-210ENST00000522563 SCNN1DP51172 638 aa11.56□□□□□ -0.56
NSMCE2-210ENST00000522563 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
NSMCE2-210ENST00000522563 KIAA1024Q9UPX6 916 aa11.56□□□□□ -0.56
NSMCE2-210ENST00000522563 RFX1P22670 979 aa11.55□□□□□ -0.56
NSMCE2-210ENST00000522563 CLDN10P78369 228 aa11.55□□□□□ -0.56
NSMCE2-210ENST00000522563 CLN3Q13286 438 aa11.55□□□□□ -0.56
NSMCE2-210ENST00000522563 RNF217Q8TC41 542 aa11.55□□□□□ -0.56
NSMCE2-210ENST00000522563 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
NSMCE2-210ENST00000522563 MAN1A2O60476 641 aa11.54□□□□□ -0.56
NSMCE2-210ENST00000522563 ERICH6Q7L0X2 663 aa11.54□□□□□ -0.56
NSMCE2-210ENST00000522563 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
NSMCE2-210ENST00000522563 TMEM229AB2RXF0 380 aa11.53□□□□□ -0.56
NSMCE2-210ENST00000522563 GDF10P55107 478 aa11.53□□□□□ -0.56
NSMCE2-210ENST00000522563 KANK4Q5T7N3 995 aaPredicted RBP11.53□□□□□ -0.56
NSMCE2-210ENST00000522563 CCDC82Q8N4S0 544 aa11.53□□□□□ -0.56
NSMCE2-210ENST00000522563 XAGE2Q96GT9 111 aa11.53□□□□□ -0.56
NSMCE2-210ENST00000522563 HRH3Q9Y5N1 445 aa11.53□□□□□ -0.56
NSMCE2-210ENST00000522563 ERCC6Q03468 1493 aa11.52□□□□□ -0.56
NSMCE2-210ENST00000522563 RNF144AP50876 292 aaPredicted RBP11.52□□□□□ -0.57
NSMCE2-210ENST00000522563 CDCA8Q53HL2 280 aa11.52□□□□□ -0.57
NSMCE2-210ENST00000522563 NLRP3Q96P20 1036 aa11.52□□□□□ -0.57
NSMCE2-210ENST00000522563 ESYT1Q9BSJ8 1104 aa11.52□□□□□ -0.57
NSMCE2-210ENST00000522563 PSME1Q06323 249 aa11.51□□□□□ -0.57
NSMCE2-210ENST00000522563 OGFOD1Q8N543 542 aa11.51□□□□□ -0.57
NSMCE2-210ENST00000522563 CUX2O14529 1486 aa11.51□□□□□ -0.57
NSMCE2-210ENST00000522563 INHAP05111 366 aa11.5□□□□□ -0.57
NSMCE2-210ENST00000522563 CENPCQ03188 943 aa11.5□□□□□ -0.57
NSMCE2-210ENST00000522563 PRICKLE2Q7Z3G6 844 aa11.5□□□□□ -0.57
NSMCE2-210ENST00000522563 TRIM50Q86XT4 487 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms