RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 CT47A1Q5JQC4 288 aaPredicted RBP14.5□□□□□ -0.09
SPIDR-217ENST00000522117 EGFL6Q8IUX8 553 aa14.5□□□□□ -0.09
SPIDR-217ENST00000522117 AFAP1Q8N556 730 aa14.5□□□□□ -0.09
SPIDR-217ENST00000522117 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
SPIDR-217ENST00000522117 AP5Z1O43299 807 aa14.5□□□□□ -0.09
SPIDR-217ENST00000522117 CTR9Q6PD62 1173 aa14.5□□□□□ -0.09
SPIDR-217ENST00000522117 DZIP1LQ8IYY4 767 aaKnown RBP14.5□□□□□ -0.09
SPIDR-217ENST00000522117 GPATCH11Q8N954 259 aa14.5□□□□□ -0.09
SPIDR-217ENST00000522117 SYAP1Q96A49 352 aaPredicted RBP14.5□□□□□ -0.09
SPIDR-217ENST00000522117 SMC4Q9NTJ3 1288 aa14.5□□□□□ -0.09
SPIDR-217ENST00000522117 LAMC1P11047 1609 aa14.49□□□□□ -0.09
SPIDR-217ENST00000522117 MUM1L1Q5H9M0 696 aa14.49□□□□□ -0.09
SPIDR-217ENST00000522117 C9orf84Q5VXU9 1444 aa14.49□□□□□ -0.09
SPIDR-217ENST00000522117 TRHP20396 242 aaPredicted RBP14.49□□□□□ -0.09
SPIDR-217ENST00000522117 GUCY2CP25092 1073 aa14.49□□□□□ -0.09
SPIDR-217ENST00000522117 TMF1P82094 1093 aa14.49□□□□□ -0.09
SPIDR-217ENST00000522117 SH3BP1Q9Y3L3 701 aa14.49□□□□□ -0.09
SPIDR-217ENST00000522117 ARHGAP5Q13017 1502 aa14.48□□□□□ -0.09
SPIDR-217ENST00000522117 TPM3P06753 285 aa14.48□□□□□ -0.09
SPIDR-217ENST00000522117 CHD1LQ86WJ1 897 aa14.48□□□□□ -0.09
SPIDR-217ENST00000522117 TRIM66O15016 1216 aa14.48□□□□□ -0.09
SPIDR-217ENST00000522117 CASQ1P31415 396 aa14.48□□□□□ -0.09
SPIDR-217ENST00000522117 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
SPIDR-217ENST00000522117 SYT10Q6XYQ8 523 aa14.48□□□□□ -0.09
SPIDR-217ENST00000522117 ASXL2Q76L83 1435 aa14.47□□□□□ -0.09
SPIDR-217ENST00000522117 FOXD4L5Q5VV16 416 aaPredicted RBP14.47□□□□□ -0.09
SPIDR-217ENST00000522117 FBXO38Q6PIJ6 1188 aa14.47□□□□□ -0.09
SPIDR-217ENST00000522117 BANK1Q8NDB2 785 aa14.47□□□□□ -0.09
SPIDR-217ENST00000522117 FOXD4L4Q8WXT5 416 aaPredicted RBP14.47□□□□□ -0.09
SPIDR-217ENST00000522117 HCLS1P14317 486 aaPredicted RBP14.47□□□□□ -0.09
SPIDR-217ENST00000522117 ATG3Q9NT62 314 aa14.47□□□□□ -0.09
SPIDR-217ENST00000522117 CCDC141Q6ZP82 1450 aa14.47□□□□□ -0.09
SPIDR-217ENST00000522117 TSPY4P0CV99 314 aa14.46□□□□□ -0.09
SPIDR-217ENST00000522117 TSPY10P0CW01 314 aa14.46□□□□□ -0.09
SPIDR-217ENST00000522117 CCDC112Q8NEF3 446 aa14.46□□□□□ -0.09
SPIDR-217ENST00000522117 BRMS1Q9HCU9 246 aa14.46□□□□□ -0.09
SPIDR-217ENST00000522117 LCMT1Q9UIC8 334 aa14.46□□□□□ -0.09
SPIDR-217ENST00000522117 ASXL1Q8IXJ9 1541 aa14.46□□□□□ -0.09
SPIDR-217ENST00000522117 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.09
SPIDR-217ENST00000522117 IRF6O14896 467 aa14.46□□□□□ -0.09
SPIDR-217ENST00000522117 GADD45BO75293 160 aaPredicted RBP14.46□□□□□ -0.09
SPIDR-217ENST00000522117 C16orf45Q96MC5 204 aaPredicted RBP14.46□□□□□ -0.09
SPIDR-217ENST00000522117 RAD50Q92878 1312 aa14.46□□□□□ -0.1
SPIDR-217ENST00000522117 ANKRD50Q9ULJ7 1429 aa14.46□□□□□ -0.1
SPIDR-217ENST00000522117 MYO1CO00159 1063 aa14.45□□□□□ -0.1
SPIDR-217ENST00000522117 SETQ01105 290 aaPredicted RBP14.45□□□□□ -0.1
SPIDR-217ENST00000522117 TSGA10IPQ3SY00 556 aa14.45□□□□□ -0.1
SPIDR-217ENST00000522117 SLC26A8Q96RN1 970 aa14.45□□□□□ -0.1
SPIDR-217ENST00000522117 PAXBP1Q9Y5B6 917 aa14.45□□□□□ -0.1
SPIDR-217ENST00000522117 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
SPIDR-217ENST00000522117 C10orf67Q8IYJ2 551 aa14.45□□□□□ -0.1
SPIDR-217ENST00000522117 TNNT1P13805 278 aa14.44□□□□□ -0.1
SPIDR-217ENST00000522117 NEK11Q8NG66 645 aa14.44□□□□□ -0.1
SPIDR-217ENST00000522117 CEP83Q9Y592 693 aa14.44□□□□□ -0.1
SPIDR-217ENST00000522117 SLFNL1Q499Z3 407 aa14.44□□□□□ -0.1
SPIDR-217ENST00000522117 SPC24Q8NBT2 197 aa14.44□□□□□ -0.1
SPIDR-217ENST00000522117 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
SPIDR-217ENST00000522117 YEATS2Q9ULM3 1422 aa14.44□□□□□ -0.1
SPIDR-217ENST00000522117 UNC13BO14795 1591 aa14.44□□□□□ -0.1
SPIDR-217ENST00000522117 TRAPPC8Q9Y2L5 1435 aa14.43□□□□□ -0.1
SPIDR-217ENST00000522117 SEMA3FQ13275 785 aa14.43□□□□□ -0.1
SPIDR-217ENST00000522117 DDX19BQ9UMR2 479 aa14.43□□□□□ -0.1
SPIDR-217ENST00000522117 SMARCA5O60264 1052 aaPredicted RBP14.43□□□□□ -0.1
SPIDR-217ENST00000522117 BRD1O95696 1058 aa14.43□□□□□ -0.1
SPIDR-217ENST00000522117 SRPK2P78362 688 aaKnown RBP14.43□□□□□ -0.1
SPIDR-217ENST00000522117 SCAF11Q99590 1463 aaKnown RBP14.43□□□□□ -0.1
SPIDR-217ENST00000522117 PLCH2O75038 1416 aa14.43□□□□□ -0.1
SPIDR-217ENST00000522117 ERBB3P21860 1342 aa14.43□□□□□ -0.1
SPIDR-217ENST00000522117 USP26Q9BXU7 913 aa14.43□□□□□ -0.1
SPIDR-217ENST00000522117 KANK1Q14678 1352 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 CCDC172P0C7W6 258 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 PTGS1P23219 599 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 ZBTB40Q9NUA8 1239 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.42□□□□□ -0.1
SPIDR-217ENST00000522117 ZNF215Q9UL58 517 aaPredicted RBP14.42□□□□□ -0.1
SPIDR-217ENST00000522117 V9GYY5 206 aaPredicted RBP14.42□□□□□ -0.1
SPIDR-217ENST00000522117 SYNMO15061 1565 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 TRIM27P14373 513 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 KRBA2Q6ZNG9 492 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 ITPRIPQ8IWB1 547 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 GTF3C6Q969F1 213 aa14.42□□□□□ -0.1
SPIDR-217ENST00000522117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.13e-6■■■□□ 15.2
SPIDR-217ENST00000522117 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
SPIDR-217ENST00000522117 CDC45O75419 566 aa14.41□□□□□ -0.1
SPIDR-217ENST00000522117 TXLNBQ8N3L3 684 aa14.41□□□□□ -0.1
SPIDR-217ENST00000522117 TOMM22Q9NS69 142 aa14.41□□□□□ -0.1
SPIDR-217ENST00000522117 RRP7AQ9Y3A4 280 aaKnown RBP14.41□□□□□ -0.1
SPIDR-217ENST00000522117 FHOD1Q9Y613 1164 aa14.41□□□□□ -0.1
SPIDR-217ENST00000522117 PTPRCP08575 1304 aa14.41□□□□□ -0.1
SPIDR-217ENST00000522117 CCDC183Q5T5S1 534 aa14.41□□□□□ -0.1
SPIDR-217ENST00000522117 WDR63Q8IWG1 891 aa14.41□□□□□ -0.1
SPIDR-217ENST00000522117 RTF1Q92541 710 aaKnown RBP14.41□□□□□ -0.1
SPIDR-217ENST00000522117 IQSEC2Q5JU85 1478 aa14.4□□□□□ -0.1
SPIDR-217ENST00000522117 BMS1Q14692 1282 aaKnown RBP14.4□□□□□ -0.1
SPIDR-217ENST00000522117 ELF2Q15723 593 aa14.4□□□□□ -0.1
SPIDR-217ENST00000522117 NEUROD2Q15784 382 aa14.4□□□□□ -0.1
SPIDR-217ENST00000522117 EFCAB2Q5VUJ9 269 aa14.4□□□□□ -0.1
SPIDR-217ENST00000522117 GOLGA6L6A8MZA4 724 aa14.4□□□□□ -0.1
SPIDR-217ENST00000522117 PLA2G4AP47712 749 aa14.4□□□□□ -0.1
SPIDR-217ENST00000522117 FUCA2Q9BTY2 467 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms