RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 PARP4Q9UKK3 1724 aaKnown RBP32.05■■■□□ 2.72
PVT1-212ENST00000521951 RBM6P78332 1123 aaKnown RBP32.05■■■□□ 2.72
PVT1-212ENST00000521951 CDCA7Q9BWT1 371 aaPredicted RBP32.05■■■□□ 2.72
PVT1-212ENST00000521951 RUNDC1Q96C34 613 aa32.04■■■□□ 2.72
PVT1-212ENST00000521951 OVOS2A0A0G2JMS6 1433 aa32.03■■■□□ 2.72
PVT1-212ENST00000521951 ONECUT3O60422 494 aaPredicted RBP32.01■■■□□ 2.72
PVT1-212ENST00000521951 NEFMP07197 916 aa32■■■□□ 2.71
PVT1-212ENST00000521951 PLEKHO1Q53GL0 409 aaPredicted RBP32■■■□□ 2.71
PVT1-212ENST00000521951 PLEKHG2Q9H7P9 1386 aa32■■■□□ 2.71
PVT1-212ENST00000521951 MAPK8IP3Q9UPT6 1336 aa32■■■□□ 2.71
PVT1-212ENST00000521951 RXRBP28702 533 aa31.99■■■□□ 2.71
PVT1-212ENST00000521951 AMOTQ4VCS5 1084 aa31.99■■■□□ 2.71
PVT1-212ENST00000521951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.99■■■□□ 2.716e-7■■□□□ 13.7
PVT1-212ENST00000521951 PKD1L3Q7Z443 1732 aa31.98■■■□□ 2.71
PVT1-212ENST00000521951 ZCRB1Q8TBF4 217 aaKnown RBP31.98■■■□□ 2.71
PVT1-212ENST00000521951 THSD7AQ9UPZ6 1657 aa31.98■■■□□ 2.71
PVT1-212ENST00000521951 MTHFSDQ2M296 383 aaKnown RBP31.97■■■□□ 2.71
PVT1-212ENST00000521951 SPG7Q9UQ90 795 aa31.97■■■□□ 2.71
PVT1-212ENST00000521951 EXOC5O00471 708 aa31.96■■■□□ 2.71
PVT1-212ENST00000521951 A0A0G2JS52 829 aa31.95■■■□□ 2.71
PVT1-212ENST00000521951 MYT1Q01538 1121 aa31.95■■■□□ 2.71
PVT1-212ENST00000521951 DDB1Q16531 1140 aa31.95■■■□□ 2.7
PVT1-212ENST00000521951 APAF1O14727 1248 aa31.94■■■□□ 2.7
PVT1-212ENST00000521951 SEPT12Q8IYM1 358 aa31.94■■■□□ 2.7
PVT1-212ENST00000521951 LRRC37A3O60309 1634 aa31.93■■■□□ 2.7
PVT1-212ENST00000521951 GAS2L2Q8NHY3 880 aa31.93■■■□□ 2.7
PVT1-212ENST00000521951 SHANK3Q9BYB0 1731 aa31.92■■■□□ 2.7
PVT1-212ENST00000521951 ZNF530Q6P9A1 599 aaPredicted RBP31.92■■■□□ 2.7
PVT1-212ENST00000521951 TNS2Q63HR2 1409 aa31.92■■■□□ 2.7
PVT1-212ENST00000521951 NFE2L2Q16236 605 aa31.91■■■□□ 2.7
PVT1-212ENST00000521951 TMPOP42166 694 aaKnown RBP31.9■■■□□ 2.7
PVT1-212ENST00000521951 SENP3-EIF4A1A0A087X0R7 540 aa31.9■■■□□ 2.7
PVT1-212ENST00000521951 PCDH11XQ9BZA7 1347 aa31.89■■■□□ 2.7
PVT1-212ENST00000521951 PCDH11YQ9BZA8 1340 aa31.89■■■□□ 2.7
PVT1-212ENST00000521951 CYP27B1O15528 508 aa31.89■■■□□ 2.7
PVT1-212ENST00000521951 DDX54Q8TDD1 881 aaKnown RBP31.89■■■□□ 2.7
PVT1-212ENST00000521951 RRP7AQ9Y3A4 280 aaKnown RBP31.89■■■□□ 2.7
PVT1-212ENST00000521951 DLG5Q8TDM6 1919 aa31.88■■■□□ 2.69
PVT1-212ENST00000521951 NEUROD2Q15784 382 aa31.87■■■□□ 2.69
PVT1-212ENST00000521951 IFNL2Q8IZJ0 200 aa31.87■■■□□ 2.69
PVT1-212ENST00000521951 PHKG2P15735 406 aa31.86■■■□□ 2.69
PVT1-212ENST00000521951 RIPK4P57078 832 aa31.85■■■□□ 2.69
PVT1-212ENST00000521951 AKAP4Q5JQC9 854 aa31.85■■■□□ 2.69
PVT1-212ENST00000521951 C1orf141Q5JVX7 400 aa31.85■■■□□ 2.69
PVT1-212ENST00000521951 BRWD3Q6RI45 1802 aa31.85■■■□□ 2.69
PVT1-212ENST00000521951 PDE3BQ13370 1112 aa31.84■■■□□ 2.69
PVT1-212ENST00000521951 MARCH10Q8NA82 808 aaPredicted RBP31.84■■■□□ 2.69
PVT1-212ENST00000521951 RGS12O14924 1447 aa31.83■■■□□ 2.69
PVT1-212ENST00000521951 GNAT3A8MTJ3 354 aa31.82■■■□□ 2.68
PVT1-212ENST00000521951 MAP3K5Q99683 1374 aa31.82■■■□□ 2.68
PVT1-212ENST00000521951 SALL2Q9Y467 1007 aaPredicted RBP31.8■■■□□ 2.68
PVT1-212ENST00000521951 NKX1-1Q15270 411 aaPredicted RBP31.79■■■□□ 2.68
PVT1-212ENST00000521951 MPRIPQ6WCQ1 1025 aa31.78■■■□□ 2.68
PVT1-212ENST00000521951 TRIM35Q9UPQ4 493 aa31.78■■■□□ 2.68
PVT1-212ENST00000521951 HTATSF1O43719 755 aaKnown RBP31.77■■■□□ 2.68
PVT1-212ENST00000521951 HSP90AB1P08238 724 aaKnown RBP31.77■■■□□ 2.68
PVT1-212ENST00000521951 NCBP3Q53F19 620 aaKnown RBP31.77■■■□□ 2.68
PVT1-212ENST00000521951 KRT27Q7Z3Y8 459 aa31.77■■■□□ 2.68
PVT1-212ENST00000521951 HNRNPUQ00839 825 aaKnown RBP eCLIP31.76■■■□□ 2.681e-6■■■■□ 21.2
PVT1-212ENST00000521951 RTF1Q92541 710 aaKnown RBP31.76■■■□□ 2.68
PVT1-212ENST00000521951 VIRMAQ69YN4 1812 aaKnown RBP31.76■■■□□ 2.67
PVT1-212ENST00000521951 NGEFQ8N5V2 710 aa31.75■■■□□ 2.67
PVT1-212ENST00000521951 LGR6Q9HBX8 967 aa31.75■■■□□ 2.67
PVT1-212ENST00000521951 LMOD3Q0VAK6 560 aa31.75■■■□□ 2.67
PVT1-212ENST00000521951 DCTN1Q14203 1278 aa31.75■■■□□ 2.67
PVT1-212ENST00000521951 IL17REQ8NFR9 667 aa31.75■■■□□ 2.67
PVT1-212ENST00000521951 DCAF5Q96JK2 942 aa31.75■■■□□ 2.67
PVT1-212ENST00000521951 RNMTO43148 476 aaKnown RBP31.74■■■□□ 2.67
PVT1-212ENST00000521951 CCDC27Q2M243 656 aa31.74■■■□□ 2.67
PVT1-212ENST00000521951 FAM182BQ5T319 152 aa31.74■■■□□ 2.67
PVT1-212ENST00000521951 MCM10Q7L590 875 aa31.74■■■□□ 2.67
PVT1-212ENST00000521951 KDM6AO15550 1401 aaPredicted RBP31.73■■■□□ 2.67
PVT1-212ENST00000521951 SCN11AQ9UI33 1791 aa31.73■■■□□ 2.67
PVT1-212ENST00000521951 ADAMTS7Q9UKP4 1686 aa31.72■■■□□ 2.67
PVT1-212ENST00000521951 KAT6BQ8WYB5 2073 aa31.71■■■□□ 2.67
PVT1-212ENST00000521951 WWC1Q8IX03 1113 aa31.7■■■□□ 2.67
PVT1-212ENST00000521951 THUMPD2Q9BTF0 503 aaKnown RBP31.7■■■□□ 2.66
PVT1-212ENST00000521951 CEMIPQ8WUJ3 1361 aa31.68■■■□□ 2.66
PVT1-212ENST00000521951 TOGARAM1Q9Y4F4 1720 aa31.68■■■□□ 2.66
PVT1-212ENST00000521951 YTHDC1Q96MU7 727 aaKnown RBP31.67■■■□□ 2.66
PVT1-212ENST00000521951 BCL9O00512 1426 aa31.66■■■□□ 2.66
PVT1-212ENST00000521951 ERVV-2B6SEH9 535 aa31.65■■■□□ 2.66
PVT1-212ENST00000521951 DOT1LQ8TEK3 1739 aa31.65■■■□□ 2.66
PVT1-212ENST00000521951 FAM196AQ6ZSG2 479 aa31.64■■■□□ 2.66
PVT1-212ENST00000521951 ACSBG1Q96GR2 724 aa31.64■■■□□ 2.66
PVT1-212ENST00000521951 ZNF521Q96K83 1311 aa31.63■■■□□ 2.65
PVT1-212ENST00000521951 ITGB4P16144 1822 aa31.62■■■□□ 2.65
PVT1-212ENST00000521951 TEFQ10587 303 aa31.62■■■□□ 2.65
PVT1-212ENST00000521951 SLC52A2Q9HAB3 445 aa31.62■■■□□ 2.65
PVT1-212ENST00000521951 PRIM1P49642 420 aaKnown RBP31.61■■■□□ 2.65
PVT1-212ENST00000521951 CABP4P57796 275 aa31.61■■■□□ 2.65
PVT1-212ENST00000521951 SBF2Q86WG5 1849 aa31.61■■■□□ 2.65
PVT1-212ENST00000521951 WDR63Q8IWG1 891 aa31.6■■■□□ 2.65
PVT1-212ENST00000521951 NFATC2IPQ8NCF5 419 aa31.6■■■□□ 2.65
PVT1-212ENST00000521951 MRC1P22897 1456 aa31.6■■■□□ 2.65
PVT1-212ENST00000521951 ZBED9Q6R2W3 1325 aa31.59■■■□□ 2.65
PVT1-212ENST00000521951 SIPA1L3O60292 1781 aaPredicted RBP31.59■■■□□ 2.65
PVT1-212ENST00000521951 KCNQ2O43526 872 aa31.58■■■□□ 2.65
PVT1-212ENST00000521951 CALD1Q05682 793 aaKnown RBP31.58■■■□□ 2.65
PVT1-212ENST00000521951 SYTL4Q96C24 671 aaPredicted RBP31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms