RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
SMIM12-206ENST00000521580 LMOD2Q6P5Q4 547 aa17.68■□□□□ 0.42
SMIM12-206ENST00000521580 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
SMIM12-206ENST00000521580 SMC5Q8IY18 1101 aa17.68■□□□□ 0.42
SMIM12-206ENST00000521580 ABCC4O15439 1325 aa17.67■□□□□ 0.42
SMIM12-206ENST00000521580 CHD2O14647 1828 aaKnown RBP17.67■□□□□ 0.42
SMIM12-206ENST00000521580 USHBP1Q8N6Y0 703 aa17.67■□□□□ 0.42
SMIM12-206ENST00000521580 ORAI2Q96SN7 254 aa17.67■□□□□ 0.42
SMIM12-206ENST00000521580 RGPD1P0DJD0 1748 aa17.67■□□□□ 0.42
SMIM12-206ENST00000521580 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
SMIM12-206ENST00000521580 PROSER2Q86WR7 435 aaPredicted RBP17.66■□□□□ 0.42
SMIM12-206ENST00000521580 CRB1P82279 1406 aa17.66■□□□□ 0.42
SMIM12-206ENST00000521580 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
SMIM12-206ENST00000521580 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
SMIM12-206ENST00000521580 KIAA0232Q92628 1395 aa17.64■□□□□ 0.42
SMIM12-206ENST00000521580 GNAT3A8MTJ3 354 aa17.64■□□□□ 0.41
SMIM12-206ENST00000521580 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
SMIM12-206ENST00000521580 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
SMIM12-206ENST00000521580 IP6K1Q92551 441 aa17.63■□□□□ 0.41
SMIM12-206ENST00000521580 ANKRD45Q5TZF3 282 aa17.62■□□□□ 0.41
SMIM12-206ENST00000521580 NUCB1Q02818 461 aa17.62■□□□□ 0.41
SMIM12-206ENST00000521580 KCNH5Q8NCM2 988 aa17.62■□□□□ 0.41
SMIM12-206ENST00000521580 CHD1LQ86WJ1 897 aa17.61■□□□□ 0.41
SMIM12-206ENST00000521580 USP19O94966 1318 aa17.61■□□□□ 0.41
SMIM12-206ENST00000521580 HTATSF1O43719 755 aaKnown RBP17.6■□□□□ 0.41
SMIM12-206ENST00000521580 BCL11AQ9H165 835 aa17.6■□□□□ 0.41
SMIM12-206ENST00000521580 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
SMIM12-206ENST00000521580 GCC1Q96CN9 775 aa17.59■□□□□ 0.41
SMIM12-206ENST00000521580 RTL1A6NKG5 1358 aa17.59■□□□□ 0.41
SMIM12-206ENST00000521580 NBPF6Q5VWK0 638 aa17.59■□□□□ 0.41
SMIM12-206ENST00000521580 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
SMIM12-206ENST00000521580 NBPF4Q96M43 638 aa17.59■□□□□ 0.41
SMIM12-206ENST00000521580 SIRT2Q8IXJ6 389 aa17.59■□□□□ 0.41
SMIM12-206ENST00000521580 IL17REQ8NFR9 667 aa17.59■□□□□ 0.41
SMIM12-206ENST00000521580 MAP3K5Q99683 1374 aa17.58■□□□□ 0.41
SMIM12-206ENST00000521580 NECTIN2Q92692 538 aa17.58■□□□□ 0.41
SMIM12-206ENST00000521580 PTPRCP08575 1304 aa17.58■□□□□ 0.4
SMIM12-206ENST00000521580 GCP02774 474 aa17.58■□□□□ 0.4
SMIM12-206ENST00000521580 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.4
SMIM12-206ENST00000521580 STK31Q9BXU1 1019 aa17.58■□□□□ 0.4
SMIM12-206ENST00000521580 LRRC59Q96AG4 307 aaKnown RBP17.57■□□□□ 0.4
SMIM12-206ENST00000521580 G2E3Q7L622 706 aa17.57■□□□□ 0.4
SMIM12-206ENST00000521580 MARF1Q9Y4F3 1742 aaKnown RBP17.57■□□□□ 0.4
SMIM12-206ENST00000521580 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
SMIM12-206ENST00000521580 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
SMIM12-206ENST00000521580 MFAP1P55081 439 aaKnown RBP17.56■□□□□ 0.4
SMIM12-206ENST00000521580 TAF7Q15545 349 aaPredicted RBP17.56■□□□□ 0.4
SMIM12-206ENST00000521580 C19orf44Q9H6X5 657 aa17.56■□□□□ 0.4
SMIM12-206ENST00000521580 NWD1Q149M9 1564 aa17.55■□□□□ 0.4
SMIM12-206ENST00000521580 F6X3S4 739 aa17.55■□□□□ 0.4
SMIM12-206ENST00000521580 RGS12O14924 1447 aa17.54■□□□□ 0.4
SMIM12-206ENST00000521580 MSH6P52701 1360 aa17.54■□□□□ 0.4
SMIM12-206ENST00000521580 MEIS3Q99687 375 aa17.53■□□□□ 0.4
SMIM12-206ENST00000521580 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
SMIM12-206ENST00000521580 TBC1D32Q96NH3 1257 aa17.53■□□□□ 0.4
SMIM12-206ENST00000521580 NFAT5O94916 1531 aa17.53■□□□□ 0.4
SMIM12-206ENST00000521580 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
SMIM12-206ENST00000521580 ATF3P18847 181 aa17.53■□□□□ 0.4
SMIM12-206ENST00000521580 ARHGEF25Q86VW2 580 aa17.52■□□□□ 0.4
SMIM12-206ENST00000521580 USP54Q70EL1 1684 aa17.52■□□□□ 0.4
SMIM12-206ENST00000521580 FKBP5Q13451 457 aaPredicted RBP17.52■□□□□ 0.39
SMIM12-206ENST00000521580 BECN1Q14457 450 aa17.52■□□□□ 0.39
SMIM12-206ENST00000521580 ZNF530Q6P9A1 599 aaPredicted RBP17.51■□□□□ 0.39
SMIM12-206ENST00000521580 LTN1O94822 1766 aa17.51■□□□□ 0.39
SMIM12-206ENST00000521580 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
SMIM12-206ENST00000521580 LGR6Q9HBX8 967 aa17.51■□□□□ 0.39
SMIM12-206ENST00000521580 ANKRD24Q8TF21 1146 aa17.5■□□□□ 0.39
SMIM12-206ENST00000521580 APBB1O00213 710 aa17.5■□□□□ 0.39
SMIM12-206ENST00000521580 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
SMIM12-206ENST00000521580 FLIIQ13045 1269 aa17.5■□□□□ 0.39
SMIM12-206ENST00000521580 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
SMIM12-206ENST00000521580 C1orf167Q5SNV9 1468 aa17.49■□□□□ 0.39
SMIM12-206ENST00000521580 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
SMIM12-206ENST00000521580 CCT4P50991 539 aaKnown RBP17.49■□□□□ 0.39
SMIM12-206ENST00000521580 CEP85Q6P2H3 762 aa17.49■□□□□ 0.39
SMIM12-206ENST00000521580 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
SMIM12-206ENST00000521580 DCTPP1Q9H773 170 aa17.49■□□□□ 0.39
SMIM12-206ENST00000521580 DDX17Q92841 729 aaKnown RBP17.49■□□□□ 0.39
SMIM12-206ENST00000521580 TEFQ10587 303 aa17.48■□□□□ 0.39
SMIM12-206ENST00000521580 TMEM94Q12767 1356 aa17.48■□□□□ 0.39
SMIM12-206ENST00000521580 HSPA2P54652 639 aa17.48■□□□□ 0.39
SMIM12-206ENST00000521580 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
SMIM12-206ENST00000521580 MPRIPQ6WCQ1 1025 aa17.48■□□□□ 0.39
SMIM12-206ENST00000521580 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
SMIM12-206ENST00000521580 EIF2S2P20042 333 aaKnown RBP17.48■□□□□ 0.39
SMIM12-206ENST00000521580 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
SMIM12-206ENST00000521580 AXIN2Q9Y2T1 843 aa17.47■□□□□ 0.39
SMIM12-206ENST00000521580 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
SMIM12-206ENST00000521580 AKAP4Q5JQC9 854 aa17.46■□□□□ 0.39
SMIM12-206ENST00000521580 ATP10DQ9P241 1426 aa17.45■□□□□ 0.38
SMIM12-206ENST00000521580 AMOTQ4VCS5 1084 aa17.45■□□□□ 0.38
SMIM12-206ENST00000521580 CEMIPQ8WUJ3 1361 aa17.44■□□□□ 0.38
SMIM12-206ENST00000521580 HMMRO75330 724 aa17.44■□□□□ 0.38
SMIM12-206ENST00000521580 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
SMIM12-206ENST00000521580 KCNQ3O43525 872 aa17.44■□□□□ 0.38
SMIM12-206ENST00000521580 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
SMIM12-206ENST00000521580 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
SMIM12-206ENST00000521580 GNAI2P04899 355 aa17.43■□□□□ 0.38
SMIM12-206ENST00000521580 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
SMIM12-206ENST00000521580 SMARCA5O60264 1052 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms