RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
TRAPPC9-207ENST00000520532 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
TRAPPC9-207ENST00000520532 SCN11AQ9UI33 1791 aa10.07□□□□□ -0.8
TRAPPC9-207ENST00000520532 EXOC5O00471 708 aa10.07□□□□□ -0.8
TRAPPC9-207ENST00000520532 BAG6P46379 1132 aa10.07□□□□□ -0.8
TRAPPC9-207ENST00000520532 RAPGEF4Q8WZA2 1011 aa10.07□□□□□ -0.8
TRAPPC9-207ENST00000520532 FBLN1P23142 703 aa10.06□□□□□ -0.8
TRAPPC9-207ENST00000520532 NBPF6Q5VWK0 638 aa10.06□□□□□ -0.8
TRAPPC9-207ENST00000520532 NBPF4Q96M43 638 aa10.06□□□□□ -0.8
TRAPPC9-207ENST00000520532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.06□□□□□ -0.86e-9■□□□□ 10
TRAPPC9-207ENST00000520532 LRP5O75197 1615 aa10.05□□□□□ -0.8
TRAPPC9-207ENST00000520532 EIF4A2Q14240 407 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-207ENST00000520532 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC9-207ENST00000520532 C5P01031 1676 aa10.04□□□□□ -0.8
TRAPPC9-207ENST00000520532 PPM1GO15355 546 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-207ENST00000520532 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-207ENST00000520532 MARCH10Q8NA82 808 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC9-207ENST00000520532 MRC1P22897 1456 aa10.04□□□□□ -0.8
TRAPPC9-207ENST00000520532 TNNT2P45379 298 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC9-207ENST00000520532 CC2D1BQ5T0F9 858 aaKnown RBP10.03□□□□□ -0.8
TRAPPC9-207ENST00000520532 EYA1Q99502 592 aa10.03□□□□□ -0.8
TRAPPC9-207ENST00000520532 BCL11BQ9C0K0 894 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC9-207ENST00000520532 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
TRAPPC9-207ENST00000520532 SIPA1L3O60292 1781 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-207ENST00000520532 ZCRB1Q8TBF4 217 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-207ENST00000520532 SPG7Q9UQ90 795 aa10.02□□□□□ -0.81
TRAPPC9-207ENST00000520532 CASZ1Q86V15 1759 aa10.01□□□□□ -0.81
TRAPPC9-207ENST00000520532 PLSCR1O15162 318 aa10.01□□□□□ -0.81
TRAPPC9-207ENST00000520532 TRIM37O94972 964 aa10.01□□□□□ -0.81
TRAPPC9-207ENST00000520532 IL13P35225 146 aa10.01□□□□□ -0.81
TRAPPC9-207ENST00000520532 MTHFSP49914 203 aa10.01□□□□□ -0.81
TRAPPC9-207ENST00000520532 CFAP53Q96M91 514 aa10.01□□□□□ -0.81
TRAPPC9-207ENST00000520532 UBR2Q8IWV8 1755 aa10.01□□□□□ -0.81
TRAPPC9-207ENST00000520532 COL5A3P25940 1745 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-207ENST00000520532 DIAPH1O60610 1272 aaKnown RBP10□□□□□ -0.81
TRAPPC9-207ENST00000520532 AMOTQ4VCS5 1084 aa10□□□□□ -0.81
TRAPPC9-207ENST00000520532 FAM182BQ5T319 152 aa10□□□□□ -0.81
TRAPPC9-207ENST00000520532 USHBP1Q8N6Y0 703 aa10□□□□□ -0.81
TRAPPC9-207ENST00000520532 TUBGCP6Q96RT7 1819 aa10□□□□□ -0.81
TRAPPC9-207ENST00000520532 SRCAPQ6ZRS2 3230 aa9.99□□□□□ -0.81
TRAPPC9-207ENST00000520532 HMGB2P26583 209 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-207ENST00000520532 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-207ENST00000520532 RALBP1Q15311 655 aa9.99□□□□□ -0.81
TRAPPC9-207ENST00000520532 COL24A1Q17RW2 1714 aa9.99□□□□□ -0.81
TRAPPC9-207ENST00000520532 APBA3O96018 575 aa9.98□□□□□ -0.81
TRAPPC9-207ENST00000520532 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
TRAPPC9-207ENST00000520532 PPP2R1AP30153 589 aa9.98□□□□□ -0.81
TRAPPC9-207ENST00000520532 CAMKK2Q96RR4 588 aa9.98□□□□□ -0.81
TRAPPC9-207ENST00000520532 KDM6AO15550 1401 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC9-207ENST00000520532 DLG5Q8TDM6 1919 aa9.97□□□□□ -0.81
TRAPPC9-207ENST00000520532 CYP27B1O15528 508 aa9.97□□□□□ -0.81
TRAPPC9-207ENST00000520532 DEFB132Q7Z7B7 95 aa9.97□□□□□ -0.81
TRAPPC9-207ENST00000520532 IFNL2Q8IZJ0 200 aa9.97□□□□□ -0.81
TRAPPC9-207ENST00000520532 MYBBP1AQ9BQG0 1328 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-207ENST00000520532 KAT6BQ8WYB5 2073 aa9.97□□□□□ -0.81
TRAPPC9-207ENST00000520532 C4BP0C0L5 1744 aa9.96□□□□□ -0.81
TRAPPC9-207ENST00000520532 PHKG2P15735 406 aa9.96□□□□□ -0.82
TRAPPC9-207ENST00000520532 PLEKHO1Q53GL0 409 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-207ENST00000520532 DDX54Q8TDD1 881 aaKnown RBP9.96□□□□□ -0.82
TRAPPC9-207ENST00000520532 NUDCQ9Y266 331 aa9.96□□□□□ -0.82
TRAPPC9-207ENST00000520532 TJP1Q07157 1748 aa9.96□□□□□ -0.82
TRAPPC9-207ENST00000520532 EN1Q05925 392 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-207ENST00000520532 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
TRAPPC9-207ENST00000520532 SULT6B1Q6IMI4 303 aa9.95□□□□□ -0.82
TRAPPC9-207ENST00000520532 AEBP1Q8IUX7 1158 aa9.95□□□□□ -0.82
TRAPPC9-207ENST00000520532 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
TRAPPC9-207ENST00000520532 UBR3Q6ZT12 1888 aa9.95□□□□□ -0.82
TRAPPC9-207ENST00000520532 LAMB4A4D0S4 1761 aa9.94□□□□□ -0.82
TRAPPC9-207ENST00000520532 PALLDQ8WX93 1383 aa9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 MAP3K5Q99683 1374 aa9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 ERVV-2B6SEH9 535 aa9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 KCNQ2O43526 872 aa9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 DDX10Q13206 875 aaKnown RBP9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 EZH2Q15910 746 aaKnown RBP9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 AKAP4Q5JQC9 854 aa9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 C1orf141Q5JVX7 400 aa9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 ZNF530Q6P9A1 599 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 KDM3BQ7LBC6 1761 aa9.93□□□□□ -0.82
TRAPPC9-207ENST00000520532 TXNRD1Q16881 649 aa9.92□□□□□ -0.82
TRAPPC9-207ENST00000520532 NBPF14Q5TI25 921 aa9.92□□□□□ -0.82
TRAPPC9-207ENST00000520532 GAS2L2Q8NHY3 880 aa9.92□□□□□ -0.82
TRAPPC9-207ENST00000520532 SMARCC1Q92922 1105 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC9-207ENST00000520532 RSPH6AQ9H0K4 717 aa9.92□□□□□ -0.82
TRAPPC9-207ENST00000520532 C4AP0C0L4 1744 aa9.92□□□□□ -0.82
TRAPPC9-207ENST00000520532 CEMIPQ8WUJ3 1361 aa9.91□□□□□ -0.82
TRAPPC9-207ENST00000520532 U2SURPO15042 1029 aaKnown RBP9.91□□□□□ -0.82
TRAPPC9-207ENST00000520532 FCHSD2O94868 740 aa9.91□□□□□ -0.82
TRAPPC9-207ENST00000520532 PRIM1P49642 420 aaKnown RBP9.91□□□□□ -0.82
TRAPPC9-207ENST00000520532 ACSBG1Q96GR2 724 aa9.91□□□□□ -0.82
TRAPPC9-207ENST00000520532 PRKRIP1Q9H875 184 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC9-207ENST00000520532 TMOD3Q9NYL9 352 aa9.91□□□□□ -0.82
TRAPPC9-207ENST00000520532 KCPQ6ZWJ8 1503 aa9.91□□□□□ -0.82
TRAPPC9-207ENST00000520532 HMOX1P09601 288 aa9.9□□□□□ -0.82
TRAPPC9-207ENST00000520532 PTF1AQ7RTS3 328 aa9.9□□□□□ -0.82
TRAPPC9-207ENST00000520532 SYTL4Q96C24 671 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC9-207ENST00000520532 PNNQ9H307 717 aaKnown RBP9.9□□□□□ -0.82
TRAPPC9-207ENST00000520532 NEFMP07197 916 aa9.88□□□□□ -0.83
TRAPPC9-207ENST00000520532 U2AF1L5P0DN76 240 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC9-207ENST00000520532 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms