RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 MYOM1P52179 1685 aa21.1■□□□□ 0.97
CSMD1-207ENST00000520451 DCAF8L1A6NGE4 600 aa21.1■□□□□ 0.97
CSMD1-207ENST00000520451 PRIM1P49642 420 aaKnown RBP21.1■□□□□ 0.97
CSMD1-207ENST00000520451 ZNF827Q17R98 1081 aa21.1■□□□□ 0.97
CSMD1-207ENST00000520451 CARD14Q9BXL6 1004 aa21.1■□□□□ 0.97
CSMD1-207ENST00000520451 MTFR1LQ9H019 292 aa21.1■□□□□ 0.97
CSMD1-207ENST00000520451 HSP90AB2PQ58FF8 381 aa21.09■□□□□ 0.97
CSMD1-207ENST00000520451 INSRP06213 1382 aa21.09■□□□□ 0.97
CSMD1-207ENST00000520451 FLT4P35916 1363 aa21.09■□□□□ 0.97
CSMD1-207ENST00000520451 SLC27A3Q5K4L6 730 aa21.08■□□□□ 0.97
CSMD1-207ENST00000520451 DOT1LQ8TEK3 1739 aa21.08■□□□□ 0.97
CSMD1-207ENST00000520451 RAPGEF4Q8WZA2 1011 aa21.08■□□□□ 0.97
CSMD1-207ENST00000520451 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.97
CSMD1-207ENST00000520451 CGNL1Q0VF96 1302 aa21.07■□□□□ 0.96
CSMD1-207ENST00000520451 KIF24Q5T7B8 1368 aa21.07■□□□□ 0.96
CSMD1-207ENST00000520451 NSD2O96028 1365 aa21.06■□□□□ 0.96
CSMD1-207ENST00000520451 TATP17735 454 aaPredicted RBP21.05■□□□□ 0.96
CSMD1-207ENST00000520451 YY1P25490 414 aa21.05■□□□□ 0.96
CSMD1-207ENST00000520451 KCNQ4P56696 695 aa21.04■□□□□ 0.96
CSMD1-207ENST00000520451 AKT1S1Q96B36 256 aa21.04■□□□□ 0.96
CSMD1-207ENST00000520451 SGIP1Q9BQI5 828 aa21.04■□□□□ 0.96
CSMD1-207ENST00000520451 EMILIN1Q9Y6C2 1016 aa21.04■□□□□ 0.96
CSMD1-207ENST00000520451 FHDC1Q9C0D6 1143 aaPredicted RBP21.03■□□□□ 0.96
CSMD1-207ENST00000520451 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
CSMD1-207ENST00000520451 PCDH11XQ9BZA7 1347 aa21.02■□□□□ 0.95
CSMD1-207ENST00000520451 PCDH11YQ9BZA8 1340 aa21.02■□□□□ 0.95
CSMD1-207ENST00000520451 PPM1GO15355 546 aaPredicted RBP21.01■□□□□ 0.95
CSMD1-207ENST00000520451 ARXQ96QS3 562 aa21■□□□□ 0.95
CSMD1-207ENST00000520451 SYT17Q9BSW7 474 aa21■□□□□ 0.95
CSMD1-207ENST00000520451 TFCP2L1Q9NZI6 479 aa21■□□□□ 0.95
CSMD1-207ENST00000520451 LY75O60449 1722 aa20.99■□□□□ 0.95
CSMD1-207ENST00000520451 CCNL1Q9UK58 526 aaPredicted RBP20.99■□□□□ 0.95
CSMD1-207ENST00000520451 PNPLA7Q6ZV29 1317 aa20.99■□□□□ 0.95
CSMD1-207ENST00000520451 SLC16A10Q8TF71 515 aa20.97■□□□□ 0.95
CSMD1-207ENST00000520451 QSER1Q2KHR3 1735 aa20.97■□□□□ 0.95
CSMD1-207ENST00000520451 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
CSMD1-207ENST00000520451 ANKRD26Q9UPS8 1709 aa20.95■□□□□ 0.94
CSMD1-207ENST00000520451 CYP27B1O15528 508 aa20.95■□□□□ 0.94
CSMD1-207ENST00000520451 WASHC2AQ641Q2 1341 aa20.95■□□□□ 0.94
CSMD1-207ENST00000520451 NCAPD2Q15021 1401 aa20.95■□□□□ 0.94
CSMD1-207ENST00000520451 TUBGCP6Q96RT7 1819 aa20.94■□□□□ 0.94
CSMD1-207ENST00000520451 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
CSMD1-207ENST00000520451 POLD1P28340 1107 aa20.94■□□□□ 0.94
CSMD1-207ENST00000520451 UTRNP46939 3433 aa20.94■□□□□ 0.94
CSMD1-207ENST00000520451 MAP3K5Q99683 1374 aa20.94■□□□□ 0.94
CSMD1-207ENST00000520451 MPRIPQ6WCQ1 1025 aa20.93■□□□□ 0.94
CSMD1-207ENST00000520451 CCER1Q8TC90 406 aaPredicted RBP20.93■□□□□ 0.94
CSMD1-207ENST00000520451 POLKQ9UBT6 870 aa20.93■□□□□ 0.94
CSMD1-207ENST00000520451 TNNT2P45379 298 aaPredicted RBP20.92■□□□□ 0.94
CSMD1-207ENST00000520451 EYA1Q99502 592 aa20.92■□□□□ 0.94
CSMD1-207ENST00000520451 PALLDQ8WX93 1383 aa20.92■□□□□ 0.94
CSMD1-207ENST00000520451 PKD1L3Q7Z443 1732 aa20.92■□□□□ 0.94
CSMD1-207ENST00000520451 KLHL34Q8N239 644 aa20.91■□□□□ 0.94
CSMD1-207ENST00000520451 SPG7Q9UQ90 795 aa20.91■□□□□ 0.94
CSMD1-207ENST00000520451 MAP2P11137 1827 aaKnown RBP20.9■□□□□ 0.94
CSMD1-207ENST00000520451 MSH5O43196 834 aa20.9■□□□□ 0.94
CSMD1-207ENST00000520451 TOGARAM1Q9Y4F4 1720 aa20.9■□□□□ 0.94
CSMD1-207ENST00000520451 COL23A1Q86Y22 540 aaPredicted RBP20.88■□□□□ 0.93
CSMD1-207ENST00000520451 PANK3Q9H999 370 aa20.88■□□□□ 0.93
CSMD1-207ENST00000520451 COL24A1Q17RW2 1714 aa20.87■□□□□ 0.93
CSMD1-207ENST00000520451 C5P01031 1676 aa20.87■□□□□ 0.93
CSMD1-207ENST00000520451 EIF4A2Q14240 407 aaKnown RBP20.87■□□□□ 0.93
CSMD1-207ENST00000520451 NKX1-1Q15270 411 aaPredicted RBP20.87■□□□□ 0.93
CSMD1-207ENST00000520451 SMARCC1Q92922 1105 aaPredicted RBP20.87■□□□□ 0.93
CSMD1-207ENST00000520451 HMGB2P26583 209 aaKnown RBP20.86■□□□□ 0.93
CSMD1-207ENST00000520451 PIGBQ92521 554 aa20.86■□□□□ 0.93
CSMD1-207ENST00000520451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.86■□□□□ 0.93
CSMD1-207ENST00000520451 ITGB4P16144 1822 aa20.85■□□□□ 0.93
CSMD1-207ENST00000520451 GPR162Q16538 588 aa20.84■□□□□ 0.93
CSMD1-207ENST00000520451 MSL1Q68DK7 614 aa20.84■□□□□ 0.93
CSMD1-207ENST00000520451 PHKG2P15735 406 aa20.82■□□□□ 0.92
CSMD1-207ENST00000520451 IFNL2Q8IZJ0 200 aa20.82■□□□□ 0.92
CSMD1-207ENST00000520451 FLAD1Q8NFF5 587 aa20.82■□□□□ 0.92
CSMD1-207ENST00000520451 AK7Q96M32 723 aa20.82■□□□□ 0.92
CSMD1-207ENST00000520451 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
CSMD1-207ENST00000520451 TAF1LQ8IZX4 1826 aa20.81■□□□□ 0.92
CSMD1-207ENST00000520451 PELP1Q8IZL8 1130 aaKnown RBP20.81■□□□□ 0.92
CSMD1-207ENST00000520451 NLGN2Q8NFZ4 835 aa20.81■□□□□ 0.92
CSMD1-207ENST00000520451 GOLGB1Q14789 3259 aaKnown RBP20.81■□□□□ 0.92
CSMD1-207ENST00000520451 C4BP0C0L5 1744 aa20.81■□□□□ 0.92
CSMD1-207ENST00000520451 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
CSMD1-207ENST00000520451 LOC102724428A0A0B4J2F2 783 aa20.79■□□□□ 0.92
CSMD1-207ENST00000520451 SIK1P57059 783 aa20.79■□□□□ 0.92
CSMD1-207ENST00000520451 MORC1Q86VD1 984 aa20.79■□□□□ 0.92
CSMD1-207ENST00000520451 ZNF784Q8NCA9 323 aaPredicted RBP20.79■□□□□ 0.92
CSMD1-207ENST00000520451 PLEKHG2Q9H7P9 1386 aa20.79■□□□□ 0.92
CSMD1-207ENST00000520451 ASAP1Q9ULH1 1129 aa20.78■□□□□ 0.92
CSMD1-207ENST00000520451 PHF14O94880 888 aa20.77■□□□□ 0.92
CSMD1-207ENST00000520451 AMIGO3Q86WK7 504 aa20.77■□□□□ 0.92
CSMD1-207ENST00000520451 KNSTRNQ9Y448 316 aa20.77■□□□□ 0.92
CSMD1-207ENST00000520451 CHD4Q14839 1912 aa20.76■□□□□ 0.91
CSMD1-207ENST00000520451 LINC00116Q8NCU8 138 aa20.76■□□□□ 0.91
CSMD1-207ENST00000520451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
CSMD1-207ENST00000520451 SMIM5Q71RC9 77 aa20.75■□□□□ 0.91
CSMD1-207ENST00000520451 PLEKHO1Q53GL0 409 aaPredicted RBP20.74■□□□□ 0.91
CSMD1-207ENST00000520451 ATG3Q9NT62 314 aa20.74■□□□□ 0.91
CSMD1-207ENST00000520451 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
CSMD1-207ENST00000520451 ATP6V1AP38606 617 aa20.73■□□□□ 0.91
CSMD1-207ENST00000520451 ITPK1Q13572 414 aa20.73■□□□□ 0.91
CSMD1-207ENST00000520451 ZNF530Q6P9A1 599 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms