RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 STK26Q9P289 416 aa7.37□□□□□ -1.23
SDCBP-207ENST00000520168 PEAK1Q9H792 1746 aa7.37□□□□□ -1.23
SDCBP-207ENST00000520168 TULP4Q9NRJ4 1543 aa7.37□□□□□ -1.23
SDCBP-207ENST00000520168 OVOS2A0A0G2JMS6 1433 aa7.35□□□□□ -1.23
SDCBP-207ENST00000520168 OVOS2A0A0J9YW53 1432 aa7.35□□□□□ -1.23
SDCBP-207ENST00000520168 OVOS2Q6IE36 1432 aa7.35□□□□□ -1.23
SDCBP-207ENST00000520168 DHX57Q6P158 1386 aaKnown RBP7.35□□□□□ -1.23
SDCBP-207ENST00000520168 LMO7Q8WWI1 1683 aa7.35□□□□□ -1.23
SDCBP-207ENST00000520168 ADGRF5Q8IZF2 1346 aa7.35□□□□□ -1.23
SDCBP-207ENST00000520168 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-207ENST00000520168 PLSCR1O15162 318 aa7.35□□□□□ -1.23
SDCBP-207ENST00000520168 RNF25Q96BH1 459 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-207ENST00000520168 ZFP91Q96JP5 570 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-207ENST00000520168 THRAP3Q9Y2W1 955 aaKnown RBP7.35□□□□□ -1.23
SDCBP-207ENST00000520168 SPATA31E1Q6ZUB1 1445 aa7.35□□□□□ -1.23
SDCBP-207ENST00000520168 SSH2Q76I76 1423 aa7.35□□□□□ -1.23
SDCBP-207ENST00000520168 ITGAEP38570 1179 aa7.34□□□□□ -1.23
SDCBP-207ENST00000520168 TMEM92Q6UXU6 159 aa7.34□□□□□ -1.23
SDCBP-207ENST00000520168 MS4A4AQ96JQ5 239 aa7.34□□□□□ -1.23
SDCBP-207ENST00000520168 LRRC37A3O60309 1634 aa7.34□□□□□ -1.24
SDCBP-207ENST00000520168 KIAA0232Q92628 1395 aa7.33□□□□□ -1.24
SDCBP-207ENST00000520168 MAP3K5Q99683 1374 aa7.33□□□□□ -1.24
SDCBP-207ENST00000520168 ACIN1Q9UKV3 1341 aaKnown RBP7.33□□□□□ -1.24
SDCBP-207ENST00000520168 GIGYF1O75420 1035 aaPredicted RBP7.33□□□□□ -1.24
SDCBP-207ENST00000520168 TMEM132EQ6IEE7 984 aa7.33□□□□□ -1.24
SDCBP-207ENST00000520168 PMFBP1Q8TBY8 1022 aa7.33□□□□□ -1.24
SDCBP-207ENST00000520168 QSER1Q2KHR3 1735 aa7.32□□□□□ -1.24
SDCBP-207ENST00000520168 TOPAZ1Q8N9V7 1692 aa7.32□□□□□ -1.24
SDCBP-207ENST00000520168 VARS2Q5ST30 1063 aaKnown RBP7.32□□□□□ -1.24
SDCBP-207ENST00000520168 TCP11L2Q8N4U5 519 aa7.32□□□□□ -1.24
SDCBP-207ENST00000520168 TAOK2Q9UL54 1235 aa7.32□□□□□ -1.24
SDCBP-207ENST00000520168 BCL9O00512 1426 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 EVA1CP58658 441 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 COL24A1Q17RW2 1714 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 GPR153Q6NV75 609 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 NGDNQ8NEJ9 315 aaKnown RBP7.31□□□□□ -1.24
SDCBP-207ENST00000520168 PRAM1Q96QH2 718 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 SYT17Q9BSW7 474 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 C14orf93Q9H972 538 aaKnown RBP7.31□□□□□ -1.24
SDCBP-207ENST00000520168 STRN4Q9NRL3 753 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 POGKQ9P215 609 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 CPDO75976 1380 aa7.31□□□□□ -1.24
SDCBP-207ENST00000520168 SHANK3Q9BYB0 1731 aa7.3□□□□□ -1.24
SDCBP-207ENST00000520168 PTGER2P43116 358 aa7.3□□□□□ -1.24
SDCBP-207ENST00000520168 NLRP6P59044 892 aa7.3□□□□□ -1.24
SDCBP-207ENST00000520168 FHDC1Q9C0D6 1143 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-207ENST00000520168 MTFR1LQ9H019 292 aa7.3□□□□□ -1.24
SDCBP-207ENST00000520168 USP35Q9P2H5 1018 aa7.3□□□□□ -1.24
SDCBP-207ENST00000520168 AATKQ6ZMQ8 1374 aa7.3□□□□□ -1.24
SDCBP-207ENST00000520168 ARHGEF28Q8N1W1 1705 aaKnown RBP7.3□□□□□ -1.24
SDCBP-207ENST00000520168 NHSQ6T4R5 1651 aa7.29□□□□□ -1.24
SDCBP-207ENST00000520168 CRB1P82279 1406 aa7.29□□□□□ -1.24
SDCBP-207ENST00000520168 RGL3Q3MIN7 710 aa7.29□□□□□ -1.24
SDCBP-207ENST00000520168 BCL11BQ9C0K0 894 aaPredicted RBP7.29□□□□□ -1.24
SDCBP-207ENST00000520168 STK32BQ9NY57 414 aa7.29□□□□□ -1.24
SDCBP-207ENST00000520168 COL5A2P05997 1499 aaPredicted RBP7.29□□□□□ -1.24
SDCBP-207ENST00000520168 ADGRB1O14514 1584 aa7.29□□□□□ -1.24
SDCBP-207ENST00000520168 PAPPAQ13219 1627 aa7.28□□□□□ -1.24
SDCBP-207ENST00000520168 ZBTB7AO95365 584 aa7.28□□□□□ -1.24
SDCBP-207ENST00000520168 CHRNA2Q15822 529 aa7.28□□□□□ -1.24
SDCBP-207ENST00000520168 RNF166Q96A37 237 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-207ENST00000520168 ANO8Q9HCE9 1232 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-207ENST00000520168 WASLO00401 505 aaPredicted RBP7.27□□□□□ -1.25
SDCBP-207ENST00000520168 ZC3H6P61129 1189 aaKnown RBP7.27□□□□□ -1.25
SDCBP-207ENST00000520168 SAFB2Q14151 953 aaKnown RBP eCLIP7.27□□□□□ -1.25
SDCBP-207ENST00000520168 SLC15A2Q16348 729 aa7.27□□□□□ -1.25
SDCBP-207ENST00000520168 DDB1Q16531 1140 aa7.27□□□□□ -1.25
SDCBP-207ENST00000520168 LARP1Q6PKG0 1096 aaKnown RBP7.27□□□□□ -1.25
SDCBP-207ENST00000520168 ARXQ96QS3 562 aa7.27□□□□□ -1.25
SDCBP-207ENST00000520168 CDCA7Q9BWT1 371 aaPredicted RBP7.27□□□□□ -1.25
SDCBP-207ENST00000520168 POLR3AO14802 1390 aaPredicted RBP7.27□□□□□ -1.25
SDCBP-207ENST00000520168 PRR36Q9H6K5 1346 aa7.27□□□□□ -1.25
SDCBP-207ENST00000520168 GPR162Q16538 588 aa7.26□□□□□ -1.25
SDCBP-207ENST00000520168 FBXO22Q8NEZ5 403 aa7.26□□□□□ -1.25
SDCBP-207ENST00000520168 USP19O94966 1318 aa7.26□□□□□ -1.25
SDCBP-207ENST00000520168 BRD4O60885 1362 aaPredicted RBP7.25□□□□□ -1.25
SDCBP-207ENST00000520168 ARSIQ5FYB1 569 aa7.25□□□□□ -1.25
SDCBP-207ENST00000520168 CFAP70Q5T0N1 1121 aa7.25□□□□□ -1.25
SDCBP-207ENST00000520168 COL18A1P39060 1754 aa7.25□□□□□ -1.25
SDCBP-207ENST00000520168 BTAF1O14981 1849 aa7.24□□□□□ -1.25
SDCBP-207ENST00000520168 TRPM1Q7Z4N2 1603 aa7.24□□□□□ -1.25
SDCBP-207ENST00000520168 RGPD5Q99666 1765 aa7.24□□□□□ -1.25
SDCBP-207ENST00000520168 ABCC6O95255 1503 aa7.24□□□□□ -1.25
SDCBP-207ENST00000520168 TXNRD1Q16881 649 aa7.24□□□□□ -1.25
SDCBP-207ENST00000520168 HIRIP3Q9BW71 556 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-207ENST00000520168 PDGFDQ9GZP0 370 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-207ENST00000520168 QRICH2Q9H0J4 1663 aa7.24□□□□□ -1.25
SDCBP-207ENST00000520168 MINK1Q8N4C8 1332 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-207ENST00000520168 SLIT3O75094 1523 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 PIK3C2AO00443 1686 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 TUBGCP6Q96RT7 1819 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 GRIN3BO60391 1043 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 POLD1P28340 1107 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 NLRP13Q86W25 1043 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 ABTB2Q8N961 1025 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 SLC16A10Q8TF71 515 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 STAC3Q96MF2 364 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 STK24Q9Y6E0 443 aa7.23□□□□□ -1.25
SDCBP-207ENST00000520168 PCNTO95613 3336 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms