RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 BRWD3Q6RI45 1802 aa10.47□□□□□ -0.73
CLK4-203ENST00000519583 IL2RBP14784 551 aa10.47□□□□□ -0.73
CLK4-203ENST00000519583 DDB1Q16531 1140 aa10.47□□□□□ -0.73
CLK4-203ENST00000519583 FAM182BQ5T319 152 aa10.47□□□□□ -0.73
CLK4-203ENST00000519583 ERICH6BQ5W0A0 696 aa10.47□□□□□ -0.73
CLK4-203ENST00000519583 FAM208AQ9UK61 1670 aaKnown RBP10.46□□□□□ -0.73
CLK4-203ENST00000519583 RGPD2P0DJD1 1756 aa10.46□□□□□ -0.73
CLK4-203ENST00000519583 ZNF521Q96K83 1311 aa10.46□□□□□ -0.74
CLK4-203ENST00000519583 EYA1Q99502 592 aa10.46□□□□□ -0.74
CLK4-203ENST00000519583 RCAN3Q9UKA8 241 aa10.46□□□□□ -0.74
CLK4-203ENST00000519583 DISP2A7MBM2 1401 aa10.46□□□□□ -0.74
CLK4-203ENST00000519583 EXOC5O00471 708 aa10.45□□□□□ -0.74
CLK4-203ENST00000519583 RAPGEF4Q8WZA2 1011 aa10.45□□□□□ -0.74
CLK4-203ENST00000519583 PPP4R2Q9NY27 417 aa10.44□□□□□ -0.74
CLK4-203ENST00000519583 PARP4Q9UKK3 1724 aaKnown RBP10.44□□□□□ -0.74
CLK4-203ENST00000519583 WNK3Q9BYP7 1800 aa10.44□□□□□ -0.74
CLK4-203ENST00000519583 TATP17735 454 aaPredicted RBP10.43□□□□□ -0.74
CLK4-203ENST00000519583 GOLGA2Q08379 1002 aa10.43□□□□□ -0.74
CLK4-203ENST00000519583 LRRC37A3O60309 1634 aa10.43□□□□□ -0.74
CLK4-203ENST00000519583 DIAPH1O60610 1272 aaKnown RBP10.43□□□□□ -0.74
CLK4-203ENST00000519583 IL13P35225 146 aa10.43□□□□□ -0.74
CLK4-203ENST00000519583 RRP1P56182 461 aaKnown RBP10.43□□□□□ -0.74
CLK4-203ENST00000519583 UPF1Q92900 1129 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLK4-203ENST00000519583 MEGF6O75095 1541 aa10.43□□□□□ -0.74
CLK4-203ENST00000519583 U2AF1L5P0DN76 240 aaPredicted RBP10.42□□□□□ -0.74
CLK4-203ENST00000519583 U2AF1Q01081 240 aaKnown RBP eCLIP10.42□□□□□ -0.74
CLK4-203ENST00000519583 MARCH10Q8NA82 808 aaPredicted RBP10.42□□□□□ -0.74
CLK4-203ENST00000519583 DDX54Q8TDD1 881 aaKnown RBP10.42□□□□□ -0.74
CLK4-203ENST00000519583 RUNDC1Q96C34 613 aa10.42□□□□□ -0.74
CLK4-203ENST00000519583 TNS2Q63HR2 1409 aa10.42□□□□□ -0.74
CLK4-203ENST00000519583 IGSF1Q8N6C5 1336 aa10.42□□□□□ -0.74
CLK4-203ENST00000519583 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
CLK4-203ENST00000519583 FAM196AQ6ZSG2 479 aa10.42□□□□□ -0.74
CLK4-203ENST00000519583 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
CLK4-203ENST00000519583 COL3A1P02461 1466 aaPredicted RBP10.41□□□□□ -0.74
CLK4-203ENST00000519583 SULT6B1Q6IMI4 303 aa10.41□□□□□ -0.74
CLK4-203ENST00000519583 AEBP1Q8IUX7 1158 aa10.41□□□□□ -0.74
CLK4-203ENST00000519583 RRP7AQ9Y3A4 280 aaKnown RBP10.41□□□□□ -0.74
CLK4-203ENST00000519583 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
CLK4-203ENST00000519583 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
CLK4-203ENST00000519583 B4GALNT3Q6L9W6 998 aa10.41□□□□□ -0.74
CLK4-203ENST00000519583 OVOS2A0A0G2JMS6 1433 aa10.4□□□□□ -0.74
CLK4-203ENST00000519583 NCAPD2Q15021 1401 aa10.4□□□□□ -0.74
CLK4-203ENST00000519583 NEUROD2Q15784 382 aa10.4□□□□□ -0.74
CLK4-203ENST00000519583 NGEFQ8N5V2 710 aa10.4□□□□□ -0.74
CLK4-203ENST00000519583 SPINK5Q9NQ38 1064 aaPredicted RBP10.4□□□□□ -0.74
CLK4-203ENST00000519583 HMOX1P09601 288 aa10.39□□□□□ -0.75
CLK4-203ENST00000519583 TRIM37O94972 964 aa10.39□□□□□ -0.75
CLK4-203ENST00000519583 SF3B2Q13435 895 aaKnown RBP10.39□□□□□ -0.75
CLK4-203ENST00000519583 WWC1Q8IX03 1113 aa10.39□□□□□ -0.75
CLK4-203ENST00000519583 EP400Q96L91 3159 aa10.39□□□□□ -0.75
CLK4-203ENST00000519583 TRMT2AQ8IZ69 625 aaKnown RBP10.38□□□□□ -0.75
CLK4-203ENST00000519583 SPG7Q9UQ90 795 aa10.38□□□□□ -0.75
CLK4-203ENST00000519583 E9PSI1 815 aa10.38□□□□□ -0.75
CLK4-203ENST00000519583 PLIN1O60240 522 aa10.37□□□□□ -0.75
CLK4-203ENST00000519583 CCDC125Q86Z20 511 aa10.37□□□□□ -0.75
CLK4-203ENST00000519583 ACSBG1Q96GR2 724 aa10.37□□□□□ -0.75
CLK4-203ENST00000519583 PCDH11XQ9BZA7 1347 aa10.37□□□□□ -0.75
CLK4-203ENST00000519583 PCDH11YQ9BZA8 1340 aa10.37□□□□□ -0.75
CLK4-203ENST00000519583 RGPD1P0DJD0 1748 aa10.37□□□□□ -0.75
CLK4-203ENST00000519583 KAT6BQ8WYB5 2073 aa10.37□□□□□ -0.75
CLK4-203ENST00000519583 KDRP35968 1356 aa10.36□□□□□ -0.75
CLK4-203ENST00000519583 PLEKHO1Q53GL0 409 aaPredicted RBP10.36□□□□□ -0.75
CLK4-203ENST00000519583 CYP27B1O15528 508 aa10.36□□□□□ -0.75
CLK4-203ENST00000519583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.757e-7■■■■□ 25.1
CLK4-203ENST00000519583 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
CLK4-203ENST00000519583 EXOC6Q8TAG9 804 aa10.35□□□□□ -0.75
CLK4-203ENST00000519583 PLEKHF1Q96S99 279 aa10.35□□□□□ -0.75
CLK4-203ENST00000519583 TSHZ2Q9NRE2 1034 aa10.35□□□□□ -0.75
CLK4-203ENST00000519583 APBA3O96018 575 aa10.35□□□□□ -0.75
CLK4-203ENST00000519583 KCNQ2O43526 872 aa10.35□□□□□ -0.75
CLK4-203ENST00000519583 PTF1AQ7RTS3 328 aa10.35□□□□□ -0.75
CLK4-203ENST00000519583 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
CLK4-203ENST00000519583 SHANK3Q9BYB0 1731 aa10.35□□□□□ -0.75
CLK4-203ENST00000519583 BCL9O00512 1426 aa10.34□□□□□ -0.75
CLK4-203ENST00000519583 BAG6P46379 1132 aa10.34□□□□□ -0.75
CLK4-203ENST00000519583 AMOTQ4VCS5 1084 aa10.34□□□□□ -0.75
CLK4-203ENST00000519583 ZNF530Q6P9A1 599 aaPredicted RBP10.34□□□□□ -0.75
CLK4-203ENST00000519583 MAPK8IP3Q9UPT6 1336 aa10.34□□□□□ -0.75
CLK4-203ENST00000519583 CCDC27Q2M243 656 aa10.34□□□□□ -0.75
CLK4-203ENST00000519583 IFNL2Q8IZJ0 200 aa10.34□□□□□ -0.75
CLK4-203ENST00000519583 CCDC136Q96JN2 1154 aa10.34□□□□□ -0.75
CLK4-203ENST00000519583 BCL11BQ9C0K0 894 aaPredicted RBP10.34□□□□□ -0.75
CLK4-203ENST00000519583 PKD1L3Q7Z443 1732 aa10.34□□□□□ -0.75
CLK4-203ENST00000519583 PHKG2P15735 406 aa10.33□□□□□ -0.76
CLK4-203ENST00000519583 EN1Q05925 392 aaPredicted RBP10.33□□□□□ -0.76
CLK4-203ENST00000519583 PRKAR2BP31323 418 aa10.33□□□□□ -0.76
CLK4-203ENST00000519583 PRIM1P49642 420 aaKnown RBP10.33□□□□□ -0.76
CLK4-203ENST00000519583 C1orf141Q5JVX7 400 aa10.33□□□□□ -0.76
CLK4-203ENST00000519583 WDR63Q8IWG1 891 aa10.33□□□□□ -0.76
CLK4-203ENST00000519583 PLEKHG2Q9H7P9 1386 aa10.33□□□□□ -0.76
CLK4-203ENST00000519583 TMPOP42166 694 aaKnown RBP10.32□□□□□ -0.76
CLK4-203ENST00000519583 SBF2Q86WG5 1849 aa10.32□□□□□ -0.76
CLK4-203ENST00000519583 RSPH6AQ9H0K4 717 aa10.32□□□□□ -0.76
CLK4-203ENST00000519583 NCBP3Q53F19 620 aaKnown RBP10.32□□□□□ -0.76
CLK4-203ENST00000519583 C20orf194Q5TEA3 1177 aa10.32□□□□□ -0.76
CLK4-203ENST00000519583 TNS1Q9HBL0 1735 aaKnown RBP10.32□□□□□ -0.76
CLK4-203ENST00000519583 CRBNQ96SW2 442 aa10.31□□□□□ -0.76
CLK4-203ENST00000519583 FCHSD2O94868 740 aa10.31□□□□□ -0.76
CLK4-203ENST00000519583 NKX1-1Q15270 411 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 254.2 ms