RNA–Protein interactions for RNA: ENST00000519509.5

CCDC25-204, Transcript of coiled-coil domain containing 25, humanhuman

TSL 2

Gene CCDC25, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-204ENST00000519509 PNPLA7Q6ZV29 1317 aa13.78□□□□□ -0.2
CCDC25-204ENST00000519509 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.21
CCDC25-204ENST00000519509 KAT6BQ8WYB5 2073 aa13.77□□□□□ -0.21
CCDC25-204ENST00000519509 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
CCDC25-204ENST00000519509 FAM208AQ9UK61 1670 aaKnown RBP13.77□□□□□ -0.21
CCDC25-204ENST00000519509 ADCY9O60503 1353 aa13.76□□□□□ -0.21
CCDC25-204ENST00000519509 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
CCDC25-204ENST00000519509 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
CCDC25-204ENST00000519509 SLC16A10Q8TF71 515 aa13.76□□□□□ -0.21
CCDC25-204ENST00000519509 CENPJQ9HC77 1338 aaPredicted RBP13.74□□□□□ -0.21
CCDC25-204ENST00000519509 HSPA6P17066 643 aa13.74□□□□□ -0.21
CCDC25-204ENST00000519509 POLD1P28340 1107 aa13.74□□□□□ -0.21
CCDC25-204ENST00000519509 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
CCDC25-204ENST00000519509 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
CCDC25-204ENST00000519509 TTC21BQ7Z4L5 1316 aa13.73□□□□□ -0.21
CCDC25-204ENST00000519509 SOX12O15370 315 aa13.73□□□□□ -0.21
CCDC25-204ENST00000519509 KCNH5Q8NCM2 988 aa13.73□□□□□ -0.21
CCDC25-204ENST00000519509 NSD2O96028 1365 aa13.72□□□□□ -0.21
CCDC25-204ENST00000519509 ERBB3P21860 1342 aa13.72□□□□□ -0.21
CCDC25-204ENST00000519509 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
CCDC25-204ENST00000519509 RGPD2P0DJD1 1756 aa13.71□□□□□ -0.21
CCDC25-204ENST00000519509 GRIN3BO60391 1043 aa13.71□□□□□ -0.21
CCDC25-204ENST00000519509 KCNQ4P56696 695 aa13.71□□□□□ -0.21
CCDC25-204ENST00000519509 SLC27A3Q5K4L6 730 aa13.71□□□□□ -0.21
CCDC25-204ENST00000519509 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
CCDC25-204ENST00000519509 TAF1LQ8IZX4 1826 aa13.71□□□□□ -0.22
CCDC25-204ENST00000519509 IL2RBP14784 551 aa13.7□□□□□ -0.22
CCDC25-204ENST00000519509 USP31Q70CQ4 1352 aa13.7□□□□□ -0.22
CCDC25-204ENST00000519509 C5P01031 1676 aa13.69□□□□□ -0.22
CCDC25-204ENST00000519509 GPBP1L1Q9HC44 474 aaPredicted RBP13.69□□□□□ -0.22
CCDC25-204ENST00000519509 TTC21AQ8NDW8 1320 aa13.68□□□□□ -0.22
CCDC25-204ENST00000519509 TFCP2L1Q9NZI6 479 aa13.68□□□□□ -0.22
CCDC25-204ENST00000519509 CICQ96RK0 1608 aaPredicted RBP13.68□□□□□ -0.22
CCDC25-204ENST00000519509 KIAA1551Q9HCM1 1747 aa13.67□□□□□ -0.22
CCDC25-204ENST00000519509 ZNF526Q8TF50 670 aaPredicted RBP13.66□□□□□ -0.22
CCDC25-204ENST00000519509 NLRP2Q9NX02 1062 aa13.66□□□□□ -0.22
CCDC25-204ENST00000519509 SBNO2Q9Y2G9 1366 aa13.66□□□□□ -0.22
CCDC25-204ENST00000519509 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
CCDC25-204ENST00000519509 KIF3CO14782 793 aa13.65□□□□□ -0.22
CCDC25-204ENST00000519509 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
CCDC25-204ENST00000519509 ANKRD36BQ8N2N9 1353 aa13.64□□□□□ -0.23
CCDC25-204ENST00000519509 ANKRD24Q8TF21 1146 aa13.64□□□□□ -0.23
CCDC25-204ENST00000519509 UBR3Q6ZT12 1888 aa13.63□□□□□ -0.23
CCDC25-204ENST00000519509 MSL1Q68DK7 614 aa13.63□□□□□ -0.23
CCDC25-204ENST00000519509 MEGF6O75095 1541 aa13.63□□□□□ -0.23
CCDC25-204ENST00000519509 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
CCDC25-204ENST00000519509 KTN1Q86UP2 1357 aaKnown RBP13.62□□□□□ -0.23
CCDC25-204ENST00000519509 PRIM1P49642 420 aaKnown RBP13.61□□□□□ -0.23
CCDC25-204ENST00000519509 DNAJC5GQ8N7S2 189 aa13.61□□□□□ -0.23
CCDC25-204ENST00000519509 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
CCDC25-204ENST00000519509 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
CCDC25-204ENST00000519509 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
CCDC25-204ENST00000519509 NME9Q86XW9 330 aa13.6□□□□□ -0.23
CCDC25-204ENST00000519509 WDR90Q96KV7 1748 aa13.6□□□□□ -0.23
CCDC25-204ENST00000519509 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
CCDC25-204ENST00000519509 KIF13BQ9NQT8 1826 aa13.6□□□□□ -0.23
CCDC25-204ENST00000519509 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
CCDC25-204ENST00000519509 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
CCDC25-204ENST00000519509 ITGB4P16144 1822 aa13.58□□□□□ -0.24
CCDC25-204ENST00000519509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC25-204ENST00000519509 EDC4Q6P2E9 1401 aaKnown RBP13.57□□□□□ -0.24
CCDC25-204ENST00000519509 PKD1L3Q7Z443 1732 aa13.57□□□□□ -0.24
CCDC25-204ENST00000519509 APLP1P51693 650 aa13.57□□□□□ -0.24
CCDC25-204ENST00000519509 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
CCDC25-204ENST00000519509 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
CCDC25-204ENST00000519509 AMIGO3Q86WK7 504 aa13.56□□□□□ -0.24
CCDC25-204ENST00000519509 WWC3Q9ULE0 1092 aa13.56□□□□□ -0.24
CCDC25-204ENST00000519509 A0A1W2PP64 1363 aa13.55□□□□□ -0.24
CCDC25-204ENST00000519509 COL13A1Q5TAT6 717 aaPredicted RBP13.54□□□□□ -0.24
CCDC25-204ENST00000519509 IP6K1Q92551 441 aa13.54□□□□□ -0.24
CCDC25-204ENST00000519509 PCNTO95613 3336 aa13.54□□□□□ -0.24
CCDC25-204ENST00000519509 USP47Q96K76 1375 aa13.54□□□□□ -0.24
CCDC25-204ENST00000519509 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
CCDC25-204ENST00000519509 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
CCDC25-204ENST00000519509 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
CCDC25-204ENST00000519509 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
CCDC25-204ENST00000519509 ROCK2O75116 1388 aaKnown RBP13.51□□□□□ -0.25
CCDC25-204ENST00000519509 TOMM70O94826 608 aa13.51□□□□□ -0.25
CCDC25-204ENST00000519509 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
CCDC25-204ENST00000519509 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
CCDC25-204ENST00000519509 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
CCDC25-204ENST00000519509 ANKRD26Q9UPS8 1709 aa13.5□□□□□ -0.25
CCDC25-204ENST00000519509 FLAD1Q8NFF5 587 aa13.5□□□□□ -0.25
CCDC25-204ENST00000519509 PALLDQ8WX93 1383 aa13.49□□□□□ -0.25
CCDC25-204ENST00000519509 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC25-204ENST00000519509 HTRA3P83110 453 aa13.49□□□□□ -0.25
CCDC25-204ENST00000519509 JMYQ8N9B5 988 aa13.49□□□□□ -0.25
CCDC25-204ENST00000519509 NMRK2Q9NPI5 230 aa13.49□□□□□ -0.25
CCDC25-204ENST00000519509 PXDNLA1KZ92 1463 aa13.48□□□□□ -0.25
CCDC25-204ENST00000519509 MAP3K19Q56UN5 1328 aa13.48□□□□□ -0.25
CCDC25-204ENST00000519509 HOXC9P31274 260 aa13.48□□□□□ -0.25
CCDC25-204ENST00000519509 KLRG1Q96E93 195 aa13.48□□□□□ -0.25
CCDC25-204ENST00000519509 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
CCDC25-204ENST00000519509 RTL1A6NKG5 1358 aa13.47□□□□□ -0.25
CCDC25-204ENST00000519509 FBLN1P23142 703 aa13.47□□□□□ -0.25
CCDC25-204ENST00000519509 SLC12A5Q9H2X9 1139 aa13.47□□□□□ -0.25
CCDC25-204ENST00000519509 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
CCDC25-204ENST00000519509 KIF20BQ96Q89 1820 aa13.47□□□□□ -0.25
CCDC25-204ENST00000519509 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
CCDC25-204ENST00000519509 ARFGEF1Q9Y6D6 1849 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms