RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 NHSQ6T4R5 1651 aa29.3■■■□□ 2.28
ARFGEF1-206ENST00000519436 RAPGEF4Q8WZA2 1011 aa29.27■■■□□ 2.28
ARFGEF1-206ENST00000519436 PPM1GO15355 546 aaPredicted RBP29.26■■■□□ 2.27
ARFGEF1-206ENST00000519436 TATP17735 454 aaPredicted RBP29.24■■■□□ 2.27
ARFGEF1-206ENST00000519436 PRIM1P49642 420 aaKnown RBP29.24■■■□□ 2.27
ARFGEF1-206ENST00000519436 NCAPD2Q15021 1401 aa29.22■■■□□ 2.27
ARFGEF1-206ENST00000519436 SLC15A2Q16348 729 aa29.22■■■□□ 2.27
ARFGEF1-206ENST00000519436 PDGFDQ9GZP0 370 aaPredicted RBP29.22■■■□□ 2.27
ARFGEF1-206ENST00000519436 TNNT2P45379 298 aaPredicted RBP29.21■■■□□ 2.27
ARFGEF1-206ENST00000519436 LRRC4BQ9NT99 713 aa29.21■■■□□ 2.27
ARFGEF1-206ENST00000519436 EYA1Q99502 592 aa29.2■■■□□ 2.26
ARFGEF1-206ENST00000519436 STK32BQ9NY57 414 aa29.2■■■□□ 2.26
ARFGEF1-206ENST00000519436 NSD2O96028 1365 aa29.2■■■□□ 2.26
ARFGEF1-206ENST00000519436 SHANK3Q9BYB0 1731 aa29.2■■■□□ 2.26
ARFGEF1-206ENST00000519436 KIF7Q2M1P5 1343 aa29.2■■■□□ 2.26
ARFGEF1-206ENST00000519436 ANKRD26Q9UPS8 1709 aa29.19■■■□□ 2.26
ARFGEF1-206ENST00000519436 BTAF1O14981 1849 aa29.18■■■□□ 2.26
ARFGEF1-206ENST00000519436 SPON1Q9HCB6 807 aa29.18■■■□□ 2.26
ARFGEF1-206ENST00000519436 CYP27B1O15528 508 aa29.17■■■□□ 2.26
ARFGEF1-206ENST00000519436 SYTL4Q96C24 671 aaPredicted RBP29.17■■■□□ 2.26
ARFGEF1-206ENST00000519436 KAT6BQ8WYB5 2073 aa29.16■■■□□ 2.26
ARFGEF1-206ENST00000519436 EIF4A2Q14240 407 aaKnown RBP29.15■■■□□ 2.26
ARFGEF1-206ENST00000519436 PCDH11XQ9BZA7 1347 aa29.15■■■□□ 2.26
ARFGEF1-206ENST00000519436 PCDH11YQ9BZA8 1340 aa29.15■■■□□ 2.26
ARFGEF1-206ENST00000519436 MAP2P11137 1827 aaKnown RBP29.15■■■□□ 2.26
ARFGEF1-206ENST00000519436 SLC27A3Q5K4L6 730 aa29.14■■■□□ 2.26
ARFGEF1-206ENST00000519436 KNSTRNQ9Y448 316 aa29.14■■■□□ 2.26
ARFGEF1-206ENST00000519436 AMER1Q5JTC6 1135 aaPredicted RBP29.12■■■□□ 2.25
ARFGEF1-206ENST00000519436 MORC1Q86VD1 984 aa29.12■■■□□ 2.25
ARFGEF1-206ENST00000519436 ZNF827Q17R98 1081 aa29.11■■■□□ 2.25
ARFGEF1-206ENST00000519436 CASZ1Q86V15 1759 aa29.11■■■□□ 2.25
ARFGEF1-206ENST00000519436 PAPPAQ13219 1627 aa29.1■■■□□ 2.25
ARFGEF1-206ENST00000519436 PER1O15534 1290 aaPredicted RBP29.1■■■□□ 2.25
ARFGEF1-206ENST00000519436 NKX1-1Q15270 411 aaPredicted RBP29.1■■■□□ 2.25
ARFGEF1-206ENST00000519436 AKT1S1Q96B36 256 aa29.1■■■□□ 2.25
ARFGEF1-206ENST00000519436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.1■■■□□ 2.256e-7■■□□□ 12.1
ARFGEF1-206ENST00000519436 ZBTB7AO95365 584 aa29.09■■■□□ 2.25
ARFGEF1-206ENST00000519436 PTGER2P43116 358 aa29.07■■■□□ 2.24
ARFGEF1-206ENST00000519436 KCNQ4P56696 695 aa29.07■■■□□ 2.24
ARFGEF1-206ENST00000519436 DOT1LQ8TEK3 1739 aa29.07■■■□□ 2.24
ARFGEF1-206ENST00000519436 SPG7Q9UQ90 795 aa29.07■■■□□ 2.24
ARFGEF1-206ENST00000519436 IGSF1Q8N6C5 1336 aa29.05■■■□□ 2.24
ARFGEF1-206ENST00000519436 ATF5Q9Y2D1 282 aaPredicted RBP29.04■■■□□ 2.24
ARFGEF1-206ENST00000519436 PKD1L3Q7Z443 1732 aa29.03■■■□□ 2.24
ARFGEF1-206ENST00000519436 MPRIPQ6WCQ1 1025 aa29.02■■■□□ 2.24
ARFGEF1-206ENST00000519436 SGIP1Q9BQI5 828 aa29.02■■■□□ 2.24
ARFGEF1-206ENST00000519436 MTFR1LQ9H019 292 aa29.02■■■□□ 2.24
ARFGEF1-206ENST00000519436 PPP1R1BQ9UD71 204 aaPredicted RBP29.01■■■□□ 2.23
ARFGEF1-206ENST00000519436 CCNL1Q9UK58 526 aaPredicted RBP29.01■■■□□ 2.23
ARFGEF1-206ENST00000519436 PHKG2P15735 406 aa29■■■□□ 2.23
ARFGEF1-206ENST00000519436 PLEKHG2Q9H7P9 1386 aa29■■■□□ 2.23
ARFGEF1-206ENST00000519436 PIGBQ92521 554 aa28.99■■■□□ 2.23
ARFGEF1-206ENST00000519436 LY75O60449 1722 aa28.98■■■□□ 2.23
ARFGEF1-206ENST00000519436 IFNL2Q8IZJ0 200 aa28.98■■■□□ 2.23
ARFGEF1-206ENST00000519436 PNPLA7Q6ZV29 1317 aa28.96■■■□□ 2.23
ARFGEF1-206ENST00000519436 IL13P35225 146 aa28.96■■■□□ 2.23
ARFGEF1-206ENST00000519436 PALLDQ8WX93 1383 aa28.94■■■□□ 2.22
ARFGEF1-206ENST00000519436 AEBP1Q8IUX7 1158 aa28.94■■■□□ 2.22
ARFGEF1-206ENST00000519436 TFCP2L1Q9NZI6 479 aa28.94■■■□□ 2.22
ARFGEF1-206ENST00000519436 TOGARAM1Q9Y4F4 1720 aa28.94■■■□□ 2.22
ARFGEF1-206ENST00000519436 SLC16A10Q8TF71 515 aa28.93■■■□□ 2.22
ARFGEF1-206ENST00000519436 SMARCC1Q92922 1105 aaPredicted RBP28.93■■■□□ 2.22
ARFGEF1-206ENST00000519436 MTHFSP49914 203 aa28.92■■■□□ 2.22
ARFGEF1-206ENST00000519436 PLEKHO1Q53GL0 409 aaPredicted RBP28.91■■■□□ 2.22
ARFGEF1-206ENST00000519436 CC2D1BQ5T0F9 858 aaKnown RBP28.91■■■□□ 2.22
ARFGEF1-206ENST00000519436 NPC1L1Q9UHC9 1359 aa28.9■■■□□ 2.22
ARFGEF1-206ENST00000519436 KDRP35968 1356 aa28.89■■■□□ 2.22
ARFGEF1-206ENST00000519436 AMOTQ4VCS5 1084 aa28.89■■■□□ 2.22
ARFGEF1-206ENST00000519436 SULT6B1Q6IMI4 303 aa28.89■■■□□ 2.22
ARFGEF1-206ENST00000519436 TMOD3Q9NYL9 352 aa28.88■■■□□ 2.21
ARFGEF1-206ENST00000519436 ASAP1Q9ULH1 1129 aa28.87■■■□□ 2.21
ARFGEF1-206ENST00000519436 ITGB4P16144 1822 aa28.86■■■□□ 2.21
ARFGEF1-206ENST00000519436 COL23A1Q86Y22 540 aaPredicted RBP28.86■■■□□ 2.21
ARFGEF1-206ENST00000519436 HMGB2P26583 209 aaKnown RBP28.85■■■□□ 2.21
ARFGEF1-206ENST00000519436 DCAF5Q96JK2 942 aa28.85■■■□□ 2.21
ARFGEF1-206ENST00000519436 ARXQ96QS3 562 aa28.85■■■□□ 2.21
ARFGEF1-206ENST00000519436 SYT17Q9BSW7 474 aa28.85■■■□□ 2.21
ARFGEF1-206ENST00000519436 FHDC1Q9C0D6 1143 aaPredicted RBP28.85■■■□□ 2.21
ARFGEF1-206ENST00000519436 QSER1Q2KHR3 1735 aa28.85■■■□□ 2.21
ARFGEF1-206ENST00000519436 ERVV-2B6SEH9 535 aa28.84■■■□□ 2.21
ARFGEF1-206ENST00000519436 HSP90AB1P08238 724 aaKnown RBP28.84■■■□□ 2.21
ARFGEF1-206ENST00000519436 ZNF530Q6P9A1 599 aaPredicted RBP28.84■■■□□ 2.21
ARFGEF1-206ENST00000519436 ATG3Q9NT62 314 aa28.84■■■□□ 2.21
ARFGEF1-206ENST00000519436 LOC102724428A0A0B4J2F2 783 aa28.83■■■□□ 2.21
ARFGEF1-206ENST00000519436 SIK1P57059 783 aa28.83■■■□□ 2.21
ARFGEF1-206ENST00000519436 KDM6AO15550 1401 aaPredicted RBP28.8■■■□□ 2.2
ARFGEF1-206ENST00000519436 TUBGCP6Q96RT7 1819 aa28.79■■■□□ 2.2
ARFGEF1-206ENST00000519436 AMIGO3Q86WK7 504 aa28.79■■■□□ 2.2
ARFGEF1-206ENST00000519436 ITPK1Q13572 414 aa28.78■■■□□ 2.2
ARFGEF1-206ENST00000519436 LINC00116Q8NCU8 138 aa28.78■■■□□ 2.2
ARFGEF1-206ENST00000519436 MAP3K5Q99683 1374 aa28.77■■■□□ 2.2
ARFGEF1-206ENST00000519436 DIAPH1O60610 1272 aaKnown RBP28.77■■■□□ 2.2
ARFGEF1-206ENST00000519436 FLAD1Q8NFF5 587 aa28.77■■■□□ 2.2
ARFGEF1-206ENST00000519436 C5P01031 1676 aa28.76■■■□□ 2.19
ARFGEF1-206ENST00000519436 COL24A1Q17RW2 1714 aa28.75■■■□□ 2.19
ARFGEF1-206ENST00000519436 POLD1P28340 1107 aa28.75■■■□□ 2.19
ARFGEF1-206ENST00000519436 C1orf141Q5JVX7 400 aa28.75■■■□□ 2.19
ARFGEF1-206ENST00000519436 SLC4A9Q96Q91 983 aa28.75■■■□□ 2.19
ARFGEF1-206ENST00000519436 HMOX1P09601 288 aa28.74■■■□□ 2.19
ARFGEF1-206ENST00000519436 ATP6V1AP38606 617 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms