RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 TRERF1Q96PN7 1200 aa11□□□□□ -0.65
UBLCP1-202ENST00000519276 TMPRSS4Q9NRS4 437 aa11□□□□□ -0.65
UBLCP1-202ENST00000519276 FKBPLQ9UIM3 349 aa11□□□□□ -0.65
UBLCP1-202ENST00000519276 ZC3H4Q9UPT8 1303 aaKnown RBP11□□□□□ -0.65
UBLCP1-202ENST00000519276 H7C1W4 665 aa10.99□□□□□ -0.65
UBLCP1-202ENST00000519276 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
UBLCP1-202ENST00000519276 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
UBLCP1-202ENST00000519276 LILRA1O75019 489 aa10.99□□□□□ -0.65
UBLCP1-202ENST00000519276 NBPF20Q3BBV1 942 aa10.99□□□□□ -0.65
UBLCP1-202ENST00000519276 LCE3BQ5TA77 95 aa10.99□□□□□ -0.65
UBLCP1-202ENST00000519276 PRICKLE2Q7Z3G6 844 aa10.99□□□□□ -0.65
UBLCP1-202ENST00000519276 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
UBLCP1-202ENST00000519276 RHOQP17081 205 aa10.97□□□□□ -0.65
UBLCP1-202ENST00000519276 RIPOR1Q6ZS17 1223 aa10.97□□□□□ -0.65
UBLCP1-202ENST00000519276 MKL2Q9ULH7 1088 aa10.97□□□□□ -0.65
UBLCP1-202ENST00000519276 MX2P20592 715 aa10.96□□□□□ -0.65
UBLCP1-202ENST00000519276 GTPBP3Q969Y2 492 aaKnown RBP10.96□□□□□ -0.65
UBLCP1-202ENST00000519276 SNRPNP63162 240 aaKnown RBP10.95□□□□□ -0.66
UBLCP1-202ENST00000519276 PTK2Q05397 1052 aa10.95□□□□□ -0.66
UBLCP1-202ENST00000519276 DYRK1BQ9Y463 629 aa10.95□□□□□ -0.66
UBLCP1-202ENST00000519276 GPSM3Q9Y4H4 160 aa10.95□□□□□ -0.66
UBLCP1-202ENST00000519276 TRIM52Q96A61 297 aa10.94□□□□□ -0.66
UBLCP1-202ENST00000519276 ERVH48-1M5A8F1 160 aa10.93□□□□□ -0.66
UBLCP1-202ENST00000519276 GPC1P35052 558 aa10.93□□□□□ -0.66
UBLCP1-202ENST00000519276 MAP2K3P46734 347 aa10.93□□□□□ -0.66
UBLCP1-202ENST00000519276 OCSTAMPQ9BR26 566 aa10.93□□□□□ -0.66
UBLCP1-202ENST00000519276 CTDSPL2Q05D32 466 aa10.92□□□□□ -0.66
UBLCP1-202ENST00000519276 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
UBLCP1-202ENST00000519276 COL8A1P27658 744 aa10.91□□□□□ -0.66
UBLCP1-202ENST00000519276 ADAM32Q8TC27 787 aa10.91□□□□□ -0.66
UBLCP1-202ENST00000519276 TRIM66O15016 1216 aa10.9□□□□□ -0.67
UBLCP1-202ENST00000519276 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.67
UBLCP1-202ENST00000519276 RAB15P59190 212 aa10.9□□□□□ -0.67
UBLCP1-202ENST00000519276 KRTAP4-12Q9BQ66 201 aa10.89□□□□□ -0.67
UBLCP1-202ENST00000519276 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
UBLCP1-202ENST00000519276 GAS2L1Q99501 681 aaPredicted RBP10.88□□□□□ -0.67
UBLCP1-202ENST00000519276 PPP2R2DQ66LE6 453 aa10.87□□□□□ -0.67
UBLCP1-202ENST00000519276 ESPNB1AK53 854 aa10.86□□□□□ -0.67
UBLCP1-202ENST00000519276 SHISA8B8ZZ34 492 aa10.86□□□□□ -0.67
UBLCP1-202ENST00000519276 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
UBLCP1-202ENST00000519276 LRRN4Q8WUT4 740 aa10.86□□□□□ -0.67
UBLCP1-202ENST00000519276 BTBD11A6QL63 1104 aa10.85□□□□□ -0.67
UBLCP1-202ENST00000519276 ATP5J2-PTCD1G3V325 749 aa10.85□□□□□ -0.67
UBLCP1-202ENST00000519276 NR6A1Q15406 480 aa10.85□□□□□ -0.67
UBLCP1-202ENST00000519276 DZIP3Q86Y13 1208 aaKnown RBP10.85□□□□□ -0.67
UBLCP1-202ENST00000519276 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
UBLCP1-202ENST00000519276 RRAGCQ9HB90 399 aa10.85□□□□□ -0.67
UBLCP1-202ENST00000519276 PIK3R2O00459 728 aa10.84□□□□□ -0.67
UBLCP1-202ENST00000519276 SEPT12Q8IYM1 358 aa10.84□□□□□ -0.67
UBLCP1-202ENST00000519276 NUCKS1Q9H1E3 243 aaKnown RBP10.84□□□□□ -0.67
UBLCP1-202ENST00000519276 GDF2Q9UK05 429 aaPredicted RBP10.84□□□□□ -0.67
UBLCP1-202ENST00000519276 POU4F2Q12837 409 aa10.83□□□□□ -0.68
UBLCP1-202ENST00000519276 GRIN2CQ14957 1233 aa10.83□□□□□ -0.68
UBLCP1-202ENST00000519276 WDR44Q5JSH3 913 aa10.83□□□□□ -0.68
UBLCP1-202ENST00000519276 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
UBLCP1-202ENST00000519276 MEN1O00255 615 aa10.82□□□□□ -0.68
UBLCP1-202ENST00000519276 C1QTNF9BB2RNN3 333 aa10.82□□□□□ -0.68
UBLCP1-202ENST00000519276 EDARADDQ8WWZ3 215 aa10.82□□□□□ -0.68
UBLCP1-202ENST00000519276 KLRG1Q96E93 195 aa10.82□□□□□ -0.68
UBLCP1-202ENST00000519276 LINC00114Q6XXX2 140 aa10.81□□□□□ -0.68
UBLCP1-202ENST00000519276 C1orf229Q6ZS94 237 aaPredicted RBP10.81□□□□□ -0.68
UBLCP1-202ENST00000519276 AK7Q96M32 723 aa10.81□□□□□ -0.68
UBLCP1-202ENST00000519276 RSPH6AQ9H0K4 717 aa10.81□□□□□ -0.68
UBLCP1-202ENST00000519276 F11P03951 625 aa10.8□□□□□ -0.68
UBLCP1-202ENST00000519276 SLC27A3Q5K4L6 730 aa10.8□□□□□ -0.68
UBLCP1-202ENST00000519276 NBPF10Q6P3W6 841 aaKnown RBP10.8□□□□□ -0.68
UBLCP1-202ENST00000519276 NBPF15Q8N660 670 aa10.8□□□□□ -0.68
UBLCP1-202ENST00000519276 PNMA1Q8ND90 353 aa10.8□□□□□ -0.68
UBLCP1-202ENST00000519276 A0A1W2PRU2 124 aa10.79□□□□□ -0.68
UBLCP1-202ENST00000519276 SPATA31C2B4DYI2 1134 aa10.79□□□□□ -0.68
UBLCP1-202ENST00000519276 ITGB7P26010 798 aa10.79□□□□□ -0.68
UBLCP1-202ENST00000519276 PHF24Q9UPV7 400 aa10.79□□□□□ -0.68
UBLCP1-202ENST00000519276 CD163Q86VB7 1156 aa10.78□□□□□ -0.68
UBLCP1-202ENST00000519276 GOLGA6L1Q8N7Z2 621 aa10.78□□□□□ -0.68
UBLCP1-202ENST00000519276 GRIP2Q9C0E4 1043 aa10.78□□□□□ -0.68
UBLCP1-202ENST00000519276 SUV39H2Q9H5I1 410 aa10.78□□□□□ -0.68
UBLCP1-202ENST00000519276 TIMMDC1Q9NPL8 285 aa10.77□□□□□ -0.68
UBLCP1-202ENST00000519276 GNB5O14775 395 aa10.77□□□□□ -0.69
UBLCP1-202ENST00000519276 ZMYM1Q5SVZ6 1142 aa10.77□□□□□ -0.69
UBLCP1-202ENST00000519276 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
UBLCP1-202ENST00000519276 NLRP3Q96P20 1036 aa10.77□□□□□ -0.69
UBLCP1-202ENST00000519276 SEMA6BQ9H3T3 888 aa10.77□□□□□ -0.69
UBLCP1-202ENST00000519276 HOXB4P17483 251 aaPredicted RBP10.76□□□□□ -0.69
UBLCP1-202ENST00000519276 POLR3EQ9NVU0 708 aa10.76□□□□□ -0.69
UBLCP1-202ENST00000519276 KRTAP9-9Q9BYP9 154 aa10.75□□□□□ -0.69
UBLCP1-202ENST00000519276 KRTAP9-4Q9BYQ2 154 aa10.75□□□□□ -0.69
UBLCP1-202ENST00000519276 CCDC125Q86Z20 511 aa10.74□□□□□ -0.69
UBLCP1-202ENST00000519276 AMPD1P23109 780 aa10.73□□□□□ -0.69
UBLCP1-202ENST00000519276 TAS1R3Q7RTX0 852 aa10.73□□□□□ -0.69
UBLCP1-202ENST00000519276 NOP53Q9NZM5 478 aaKnown RBP10.73□□□□□ -0.69
UBLCP1-202ENST00000519276 CLN3Q13286 438 aa10.73□□□□□ -0.69
UBLCP1-202ENST00000519276 WASLO00401 505 aaPredicted RBP10.72□□□□□ -0.69
UBLCP1-202ENST00000519276 CHRNA4P43681 627 aa10.72□□□□□ -0.69
UBLCP1-202ENST00000519276 THBS1P07996 1170 aa10.71□□□□□ -0.69
UBLCP1-202ENST00000519276 PDE4DQ08499 809 aa10.71□□□□□ -0.69
UBLCP1-202ENST00000519276 SLCO4C1Q6ZQN7 724 aa10.71□□□□□ -0.69
UBLCP1-202ENST00000519276 ERVK-9P63128 1117 aa10.69□□□□□ -0.7
UBLCP1-202ENST00000519276 DOC2BQ14184 412 aa10.69□□□□□ -0.7
UBLCP1-202ENST00000519276 LBRQ14739 615 aaKnown RBP10.69□□□□□ -0.7
UBLCP1-202ENST00000519276 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms