RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 GTF2IP78347 998 aa8.41□□□□□ -1.06
SQLE-202ENST00000518604 PTK7Q13308 1070 aa8.41□□□□□ -1.06
SQLE-202ENST00000518604 NNTQ13423 1086 aa8.41□□□□□ -1.06
SQLE-202ENST00000518604 USP17L15C9J2P7 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L10C9JJH3 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L11C9JVI0 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L21D6R901 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L18D6R9N7 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L22D6RA61 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L19D6RCP7 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L20D6RJB6 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 NR3C2P08235 984 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 PDIA4P13667 645 aaKnown RBP8.4□□□□□ -1.06
SQLE-202ENST00000518604 USP17L24Q0WX57 530 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 TRIM67Q6ZTA4 783 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 RETREG2Q8NC44 543 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 PCDHGA11Q9Y5H2 935 aa8.4□□□□□ -1.06
SQLE-202ENST00000518604 TNFRSF10AO00220 468 aa8.39□□□□□ -1.07
SQLE-202ENST00000518604 ZBTB7BO15156 539 aaPredicted RBP8.39□□□□□ -1.07
SQLE-202ENST00000518604 LILRA1O75019 489 aa8.39□□□□□ -1.07
SQLE-202ENST00000518604 CLDN10P78369 228 aa8.39□□□□□ -1.07
SQLE-202ENST00000518604 CRTC2Q53ET0 693 aaPredicted RBP8.39□□□□□ -1.07
SQLE-202ENST00000518604 SIX5Q8N196 739 aa8.39□□□□□ -1.07
SQLE-202ENST00000518604 ZNF784Q8NCA9 323 aaPredicted RBP8.39□□□□□ -1.07
SQLE-202ENST00000518604 TRAIPQ9BWF2 469 aa8.39□□□□□ -1.07
SQLE-202ENST00000518604 NOVA2Q9UNW9 492 aaKnown RBP8.39□□□□□ -1.07
SQLE-202ENST00000518604 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
SQLE-202ENST00000518604 J3QL48 77 aa8.38□□□□□ -1.07
SQLE-202ENST00000518604 SMPD1P17405 629 aa8.38□□□□□ -1.07
SQLE-202ENST00000518604 SCTRP47872 440 aa8.38□□□□□ -1.07
SQLE-202ENST00000518604 ANKMY2Q8IV38 441 aa8.38□□□□□ -1.07
SQLE-202ENST00000518604 FAM200AQ8TCP9 573 aa8.38□□□□□ -1.07
SQLE-202ENST00000518604 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
SQLE-202ENST00000518604 KLF16Q9BXK1 252 aaPredicted RBP8.37□□□□□ -1.07
SQLE-202ENST00000518604 OSBPL3Q9H4L5 887 aa8.37□□□□□ -1.07
SQLE-202ENST00000518604 CYLDQ9NQC7 956 aa8.37□□□□□ -1.07
SQLE-202ENST00000518604 PSME1Q06323 249 aa8.36□□□□□ -1.07
SQLE-202ENST00000518604 CCDC102BQ68D86 513 aa8.36□□□□□ -1.07
SQLE-202ENST00000518604 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
SQLE-202ENST00000518604 DKK1O94907 266 aa8.35□□□□□ -1.07
SQLE-202ENST00000518604 GNRH1P01148 92 aa8.35□□□□□ -1.07
SQLE-202ENST00000518604 SEC13P55735 322 aa8.35□□□□□ -1.07
SQLE-202ENST00000518604 WDR4P57081 412 aaKnown RBP8.35□□□□□ -1.07
SQLE-202ENST00000518604 ZMIZ1Q9ULJ6 1067 aa8.35□□□□□ -1.07
SQLE-202ENST00000518604 M0R2N6 131 aa8.34□□□□□ -1.07
SQLE-202ENST00000518604 WASLO00401 505 aaPredicted RBP8.34□□□□□ -1.07
SQLE-202ENST00000518604 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
SQLE-202ENST00000518604 DPYDQ12882 1025 aa8.34□□□□□ -1.07
SQLE-202ENST00000518604 SWI5Q1ZZU3 235 aa8.34□□□□□ -1.07
SQLE-202ENST00000518604 Q6ZVU0 165 aa8.34□□□□□ -1.07
SQLE-202ENST00000518604 TPCN2Q8NHX9 752 aa8.34□□□□□ -1.07
SQLE-202ENST00000518604 ZNF594Q96JF6 807 aaPredicted RBP8.34□□□□□ -1.07
SQLE-202ENST00000518604 KIAA1024Q9UPX6 916 aa8.34□□□□□ -1.07
SQLE-202ENST00000518604 TMEM88BA6NKF7 163 aa8.33□□□□□ -1.08
SQLE-202ENST00000518604 ZIC2O95409 532 aaPredicted RBP8.33□□□□□ -1.08
SQLE-202ENST00000518604 ADH1AP07327 375 aa8.33□□□□□ -1.08
SQLE-202ENST00000518604 TIMP2P16035 220 aa8.33□□□□□ -1.08
SQLE-202ENST00000518604 ESCO1Q5FWF5 840 aa8.33□□□□□ -1.08
SQLE-202ENST00000518604 TMEM164Q5U3C3 297 aa8.33□□□□□ -1.08
SQLE-202ENST00000518604 ITPKCQ96DU7 683 aa8.33□□□□□ -1.08
SQLE-202ENST00000518604 BACH1O14867 736 aa8.32□□□□□ -1.08
SQLE-202ENST00000518604 STK32AQ8WU08 396 aa8.32□□□□□ -1.08
SQLE-202ENST00000518604 B4GALNT3Q6L9W6 998 aa8.31□□□□□ -1.08
SQLE-202ENST00000518604 HPS1Q92902 700 aa8.31□□□□□ -1.08
SQLE-202ENST00000518604 TMEM229AB2RXF0 380 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 AVPP01185 164 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 INHAP05111 366 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 SCNN1DP51172 638 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 GDF10P55107 478 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 FAM69CQ0P6D2 419 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 LAPTM4AQ15012 233 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 KCTD17Q8N5Z5 321 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 CLP1Q92989 425 aaKnown RBP8.3□□□□□ -1.08
SQLE-202ENST00000518604 ZFAND3Q9H8U3 227 aa8.3□□□□□ -1.08
SQLE-202ENST00000518604 SFI1A8K8P3 1242 aa8.29□□□□□ -1.08
SQLE-202ENST00000518604 DGAT1O75907 488 aa8.29□□□□□ -1.08
SQLE-202ENST00000518604 BRD1O95696 1058 aa8.29□□□□□ -1.08
SQLE-202ENST00000518604 PTGIRP43119 386 aa8.29□□□□□ -1.08
SQLE-202ENST00000518604 CBLBQ13191 982 aa8.29□□□□□ -1.08
SQLE-202ENST00000518604 XAGE2Q96GT9 111 aa8.29□□□□□ -1.08
SQLE-202ENST00000518604 SLC4A9Q96Q91 983 aa8.29□□□□□ -1.08
SQLE-202ENST00000518604 ZNF358Q9NW07 568 aa8.29□□□□□ -1.08
SQLE-202ENST00000518604 PATL2C9JE40 543 aaKnown RBP8.28□□□□□ -1.08
SQLE-202ENST00000518604 NRG2O14511 850 aaPredicted RBP8.28□□□□□ -1.08
SQLE-202ENST00000518604 CAPN5O15484 640 aaPredicted RBP8.28□□□□□ -1.08
SQLE-202ENST00000518604 MEIOBQ8N635 442 aa8.28□□□□□ -1.08
SQLE-202ENST00000518604 KDF1Q8NAX2 398 aaPredicted RBP8.28□□□□□ -1.08
SQLE-202ENST00000518604 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
SQLE-202ENST00000518604 TSEN34Q9BSV6 310 aaKnown RBP8.28□□□□□ -1.08
SQLE-202ENST00000518604 ETNK1Q9HBU6 452 aa8.28□□□□□ -1.08
SQLE-202ENST00000518604 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
SQLE-202ENST00000518604 GFRA3O60609 400 aa8.27□□□□□ -1.09
SQLE-202ENST00000518604 CLN3Q13286 438 aa8.27□□□□□ -1.09
SQLE-202ENST00000518604 CTC1Q2NKJ3 1217 aa8.27□□□□□ -1.09
SQLE-202ENST00000518604 ESYT1Q9BSJ8 1104 aa8.27□□□□□ -1.09
SQLE-202ENST00000518604 A0A1W2PRU2 124 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms