RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 ILDR2Q71H61 639 aa15.85■□□□□ 0.13
AP3B1-203ENST00000517940 MRS2Q9HD23 443 aa15.85■□□□□ 0.13
AP3B1-203ENST00000517940 VIRMAQ69YN4 1812 aaKnown RBP15.84■□□□□ 0.13
AP3B1-203ENST00000517940 DLG5Q8TDM6 1919 aa15.84■□□□□ 0.13
AP3B1-203ENST00000517940 ADAMTS7Q9UKP4 1686 aa15.84■□□□□ 0.13
AP3B1-203ENST00000517940 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
AP3B1-203ENST00000517940 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
AP3B1-203ENST00000517940 PHACTR3Q96KR7 559 aa15.84■□□□□ 0.13
AP3B1-203ENST00000517940 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
AP3B1-203ENST00000517940 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
AP3B1-203ENST00000517940 PLEKHG2Q9H7P9 1386 aa15.84■□□□□ 0.13
AP3B1-203ENST00000517940 CCER2I3L3R5 266 aa15.83■□□□□ 0.12
AP3B1-203ENST00000517940 MARCH10Q8NA82 808 aaPredicted RBP15.83■□□□□ 0.12
AP3B1-203ENST00000517940 CYP27B1O15528 508 aa15.82■□□□□ 0.12
AP3B1-203ENST00000517940 PRKAR2BP31323 418 aa15.82■□□□□ 0.12
AP3B1-203ENST00000517940 NUDCQ9Y266 331 aa15.82■□□□□ 0.12
AP3B1-203ENST00000517940 TATP17735 454 aaPredicted RBP15.81■□□□□ 0.12
AP3B1-203ENST00000517940 FAM182BQ5T319 152 aa15.81■□□□□ 0.12
AP3B1-203ENST00000517940 DOT1LQ8TEK3 1739 aa15.81■□□□□ 0.12
AP3B1-203ENST00000517940 RAPGEF4Q8WZA2 1011 aa15.81■□□□□ 0.12
AP3B1-203ENST00000517940 CDCA7Q9BWT1 371 aaPredicted RBP15.81■□□□□ 0.12
AP3B1-203ENST00000517940 KDM6AO15550 1401 aaPredicted RBP15.8■□□□□ 0.12
AP3B1-203ENST00000517940 FCHSD2O94868 740 aa15.8■□□□□ 0.12
AP3B1-203ENST00000517940 DDB1Q16531 1140 aa15.8■□□□□ 0.12
AP3B1-203ENST00000517940 SCN11AQ9UI33 1791 aa15.8■□□□□ 0.12
AP3B1-203ENST00000517940 MTHFSDQ2M296 383 aaKnown RBP15.79■□□□□ 0.12
AP3B1-203ENST00000517940 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
AP3B1-203ENST00000517940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.79■□□□□ 0.127e-7■■■■□ 20.4
AP3B1-203ENST00000517940 BCL9O00512 1426 aa15.78■□□□□ 0.12
AP3B1-203ENST00000517940 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
AP3B1-203ENST00000517940 ITGB4P16144 1822 aa15.78■□□□□ 0.12
AP3B1-203ENST00000517940 TNS1Q9HBL0 1735 aaKnown RBP15.77■□□□□ 0.12
AP3B1-203ENST00000517940 NHSQ6T4R5 1651 aa15.77■□□□□ 0.12
AP3B1-203ENST00000517940 PHKG2P15735 406 aa15.77■□□□□ 0.12
AP3B1-203ENST00000517940 SIPA1L3O60292 1781 aaPredicted RBP15.77■□□□□ 0.11
AP3B1-203ENST00000517940 A0A0G2JS52 829 aa15.76■□□□□ 0.11
AP3B1-203ENST00000517940 EXOC5O00471 708 aa15.76■□□□□ 0.11
AP3B1-203ENST00000517940 MYT1Q01538 1121 aa15.76■□□□□ 0.11
AP3B1-203ENST00000517940 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
AP3B1-203ENST00000517940 PTF1AQ7RTS3 328 aa15.76■□□□□ 0.11
AP3B1-203ENST00000517940 KRT27Q7Z3Y8 459 aa15.76■□□□□ 0.11
AP3B1-203ENST00000517940 PCDH11XQ9BZA7 1347 aa15.75■□□□□ 0.11
AP3B1-203ENST00000517940 PCDH11YQ9BZA8 1340 aa15.75■□□□□ 0.11
AP3B1-203ENST00000517940 NKX1-1Q15270 411 aaPredicted RBP15.75■□□□□ 0.11
AP3B1-203ENST00000517940 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
AP3B1-203ENST00000517940 DDX54Q8TDD1 881 aaKnown RBP15.75■□□□□ 0.11
AP3B1-203ENST00000517940 MRC1P22897 1456 aa15.75■□□□□ 0.11
AP3B1-203ENST00000517940 PLEKHO1Q53GL0 409 aaPredicted RBP15.74■□□□□ 0.11
AP3B1-203ENST00000517940 AMOTQ4VCS5 1084 aa15.73■□□□□ 0.11
AP3B1-203ENST00000517940 SPG7Q9UQ90 795 aa15.73■□□□□ 0.11
AP3B1-203ENST00000517940 BTAF1O14981 1849 aa15.73■□□□□ 0.11
AP3B1-203ENST00000517940 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
AP3B1-203ENST00000517940 PDE3BQ13370 1112 aa15.72■□□□□ 0.11
AP3B1-203ENST00000517940 FAM9BQ8IZU0 186 aa15.72■□□□□ 0.11
AP3B1-203ENST00000517940 RUNDC1Q96C34 613 aa15.72■□□□□ 0.11
AP3B1-203ENST00000517940 MAP3K5Q99683 1374 aa15.72■□□□□ 0.11
AP3B1-203ENST00000517940 PAPPAQ13219 1627 aa15.72■□□□□ 0.11
AP3B1-203ENST00000517940 NFE2L2Q16236 605 aa15.71■□□□□ 0.11
AP3B1-203ENST00000517940 LGR6Q9HBX8 967 aa15.71■□□□□ 0.11
AP3B1-203ENST00000517940 CEMIPQ8WUJ3 1361 aa15.71■□□□□ 0.11
AP3B1-203ENST00000517940 KCNQ2O43526 872 aa15.7■□□□□ 0.1
AP3B1-203ENST00000517940 TMPOP42166 694 aaKnown RBP15.7■□□□□ 0.1
AP3B1-203ENST00000517940 AKAP4Q5JQC9 854 aa15.7■□□□□ 0.1
AP3B1-203ENST00000517940 IFNL2Q8IZJ0 200 aa15.7■□□□□ 0.1
AP3B1-203ENST00000517940 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
AP3B1-203ENST00000517940 GAS2L2Q8NHY3 880 aa15.7■□□□□ 0.1
AP3B1-203ENST00000517940 RRP7AQ9Y3A4 280 aaKnown RBP15.7■□□□□ 0.1
AP3B1-203ENST00000517940 APAF1O14727 1248 aa15.69■□□□□ 0.1
AP3B1-203ENST00000517940 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
AP3B1-203ENST00000517940 KAT6BQ8WYB5 2073 aa15.69■□□□□ 0.1
AP3B1-203ENST00000517940 DCTN1Q14203 1278 aa15.68■□□□□ 0.1
AP3B1-203ENST00000517940 MPRIPQ6WCQ1 1025 aa15.68■□□□□ 0.1
AP3B1-203ENST00000517940 ACSBG1Q96GR2 724 aa15.68■□□□□ 0.1
AP3B1-203ENST00000517940 RNMTO43148 476 aaKnown RBP15.67■□□□□ 0.1
AP3B1-203ENST00000517940 THUMPD2Q9BTF0 503 aaKnown RBP15.67■□□□□ 0.1
AP3B1-203ENST00000517940 MAPK8IP3Q9UPT6 1336 aa15.67■□□□□ 0.1
AP3B1-203ENST00000517940 GNAT3A8MTJ3 354 aa15.66■□□□□ 0.1
AP3B1-203ENST00000517940 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
AP3B1-203ENST00000517940 MCM10Q7L590 875 aa15.66■□□□□ 0.1
AP3B1-203ENST00000517940 DCAF5Q96JK2 942 aa15.66■□□□□ 0.1
AP3B1-203ENST00000517940 UBR2Q8IWV8 1755 aa15.66■□□□□ 0.1
AP3B1-203ENST00000517940 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
AP3B1-203ENST00000517940 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
AP3B1-203ENST00000517940 C1orf141Q5JVX7 400 aa15.65■□□□□ 0.1
AP3B1-203ENST00000517940 LY75O60449 1722 aa15.65■□□□□ 0.1
AP3B1-203ENST00000517940 TRIM37O94972 964 aa15.64■□□□□ 0.09
AP3B1-203ENST00000517940 RIPK4P57078 832 aa15.64■□□□□ 0.09
AP3B1-203ENST00000517940 PIGBQ92521 554 aa15.64■□□□□ 0.09
AP3B1-203ENST00000517940 PNNQ9H307 717 aaKnown RBP15.64■□□□□ 0.09
AP3B1-203ENST00000517940 RGPD3A6NKT7 1758 aaPredicted RBP15.64■□□□□ 0.09
AP3B1-203ENST00000517940 RGPD4Q7Z3J3 1758 aa15.64■□□□□ 0.09
AP3B1-203ENST00000517940 ZNF521Q96K83 1311 aa15.63■□□□□ 0.09
AP3B1-203ENST00000517940 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
AP3B1-203ENST00000517940 HSP90AB1P08238 724 aaKnown RBP15.62■□□□□ 0.09
AP3B1-203ENST00000517940 NEUROD2Q15784 382 aa15.62■□□□□ 0.09
AP3B1-203ENST00000517940 SLC52A2Q9HAB3 445 aa15.62■□□□□ 0.09
AP3B1-203ENST00000517940 RREB1Q92766 1687 aa15.61■□□□□ 0.09
AP3B1-203ENST00000517940 ERVV-2B6SEH9 535 aa15.61■□□□□ 0.09
AP3B1-203ENST00000517940 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
AP3B1-203ENST00000517940 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms