RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 Q3C1V9 767 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 PUS10Q3MIT2 529 aaKnown RBP3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 TSGA10IPQ3SY00 556 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 KMT5BQ4FZB7 885 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 MORN1Q5T089 497 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 SIX5Q8N196 739 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 GTF3C2Q8WUA4 911 aaPredicted RBP3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 BACH2Q9BYV9 841 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 MAP10Q9P2G4 905 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 KIAA1024Q9UPX6 916 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 NOD1Q9Y239 953 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 SLC27A5Q9Y2P5 690 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 PCDHB9Q9Y5E1 797 aa3.82□□□□□ -1.8
SCARNA3-201ENST00000517097 SCAMP3O14828 347 aaKnown RBP3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 GFRA3O60609 400 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 ARHGAP4P98171 946 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 PTK2Q05397 1052 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 MRPL58Q14197 206 aaKnown RBP3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 C9orf131Q5VYM1 1079 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 GIMAP6Q6P9H5 292 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 RGL4Q8IZJ4 473 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 OCSTAMPQ9BR26 566 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 SEPT3Q9UH03 358 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 GPSM3Q9Y4H4 160 aa3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 DNMT3AQ9Y6K1 912 aaPredicted RBP3.81□□□□□ -1.8
SCARNA3-201ENST00000517097 SFI1A8K8P3 1242 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 TLL1O43897 1013 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 ZPR1O75312 459 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 FMNL1O95466 1100 aaPredicted RBP3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 NCLP19338 710 aaKnown RBP3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 SF3B2Q13435 895 aaKnown RBP3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 LAPTM4AQ15012 233 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 CCDC102BQ68D86 513 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 PDXDC2PQ6P474 469 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 BLOC1S3Q6QNY0 202 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 RNF19BQ6ZMZ0 732 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 DPH6Q7L8W6 267 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 PIK3R5Q8WYR1 880 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 CCDC85AQ96PX6 553 aaPredicted RBP3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 USB1Q9BQ65 265 aaKnown RBP3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 RBM19Q9Y4C8 960 aaKnown RBP3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 PCDHB3Q9Y5E6 796 aa3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 V9GY48 417 aaPredicted RBP3.8□□□□□ -1.8
SCARNA3-201ENST00000517097 ANKRD62A6NC57 917 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 ACTN4O43707 911 aaKnown RBP3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 LGR5O75473 907 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 P4HBP07237 508 aaKnown RBP3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 CTHP32929 405 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 GTF2IP78347 998 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 MYT1Q01538 1121 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 RAD51AP2Q09MP3 1159 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 MTMR3Q13615 1198 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 PTPRNQ16849 979 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 LDLRAD1Q5T700 205 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 CAPN12Q6ZSI9 719 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 ANKRD13AQ8IZ07 590 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 ARMC2Q8NEN0 867 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 TPCN2Q8NHX9 752 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 GPKOWQ92917 476 aaPredicted RBP eCLIP3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 HINFPQ9BQA5 517 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 MKNK1Q9BUB5 465 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 DOLKQ9UPQ8 538 aa3.79□□□□□ -1.8
SCARNA3-201ENST00000517097 NRG2O14511 850 aaPredicted RBP3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 JUNDP17535 347 aa3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 OXLD1Q5BKU9 147 aa3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 BRICD5Q6PL45 260 aa3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 METTL16Q86W50 562 aaKnown RBP3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 ADAM32Q8TC27 787 aa3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 EMID1Q96A84 441 aaPredicted RBP3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 HIRIP3Q9BW71 556 aaPredicted RBP3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 TANGO6Q9C0B7 1094 aa3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 BRPF3Q9ULD4 1205 aa3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 SALL2Q9Y467 1007 aaPredicted RBP3.78□□□□□ -1.8
SCARNA3-201ENST00000517097 RNF223E7ERA6 249 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 PTCD1O75127 700 aaKnown RBP3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 GGCXP38435 758 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 PSME1Q06323 249 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 FKBP5Q13451 457 aaPredicted RBP3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 TMC7Q7Z402 723 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 NT5DC4Q86YG4 428 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 TMEM87AQ8NBN3 555 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 DNAJC2Q99543 621 aaKnown RBP3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 ARHGAP9Q9BRR9 750 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 TINF2Q9BSI4 451 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 PRR14Q9BWN1 585 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 RBCK1Q9BYM8 510 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 LNPKQ9C0E8 428 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 PCDHGA11Q9Y5H2 935 aa3.77□□□□□ -1.81
SCARNA3-201ENST00000517097 PPEF1O14829 653 aaPredicted RBP3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 GIGYF1O75420 1035 aaPredicted RBP3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 CCNYL3P0C7X3 344 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 NPR3P17342 541 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 WEE1P30291 646 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 XPCQ01831 940 aaPredicted RBP3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 FMR1Q06787 632 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 NBPF14Q5TI25 921 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 ZBTB33Q86T24 672 aa3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 NOP9Q86U38 636 aaKnown RBP3.76□□□□□ -1.81
SCARNA3-201ENST00000517097 DZIP3Q86Y13 1208 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms