RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
SH3TC1-225ENST00000515682 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
SH3TC1-225ENST00000515682 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
SH3TC1-225ENST00000515682 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
SH3TC1-225ENST00000515682 PLEKHM2Q8IWE5 1019 aa16.36■□□□□ 0.21
SH3TC1-225ENST00000515682 PDCL2Q8N4E4 241 aa16.36■□□□□ 0.21
SH3TC1-225ENST00000515682 IL1RAPL2Q9NP60 686 aa16.35■□□□□ 0.21
SH3TC1-225ENST00000515682 MIS18AQ9NYP9 233 aa16.35■□□□□ 0.21
SH3TC1-225ENST00000515682 EMILIN1Q9Y6C2 1016 aa16.35■□□□□ 0.21
SH3TC1-225ENST00000515682 RPAP2Q8IXW5 612 aaPredicted RBP16.35■□□□□ 0.21
SH3TC1-225ENST00000515682 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
SH3TC1-225ENST00000515682 MCM5P33992 734 aa16.35■□□□□ 0.21
SH3TC1-225ENST00000515682 PPP4R3BQ5MIZ7 849 aa16.35■□□□□ 0.21
SH3TC1-225ENST00000515682 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
SH3TC1-225ENST00000515682 ADCY5O95622 1261 aa16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 ZNF445P59923 1031 aa16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 C17orf53Q8N3J3 647 aaPredicted RBP16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 F6X3S4 739 aa16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 FBXW7Q969H0 707 aa16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 PRDM15P57071 1507 aaPredicted RBP16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 IGSF3O75054 1194 aa16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 TMEM63CQ9P1W3 806 aa16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 NEO1Q92859 1461 aa16.34■□□□□ 0.21
SH3TC1-225ENST00000515682 MRPL50Q8N5N7 158 aaKnown RBP16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 BICD2Q8TD16 824 aa16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 TRIM5Q9C035 493 aa16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 IL16Q14005 1332 aa16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 EIF2S2P20042 333 aaKnown RBP16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 HS1BP3Q53T59 392 aa16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 NME9Q86XW9 330 aa16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 C8orf58Q8NAV2 365 aa16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 USP26Q9BXU7 913 aa16.33■□□□□ 0.21
SH3TC1-225ENST00000515682 ATP10AO60312 1499 aa16.33■□□□□ 0.2
SH3TC1-225ENST00000515682 GOLGA6L19H0YKK7 550 aa16.33■□□□□ 0.2
SH3TC1-225ENST00000515682 FYB1O15117 783 aa16.33■□□□□ 0.2
SH3TC1-225ENST00000515682 VAMP4O75379 141 aa16.33■□□□□ 0.2
SH3TC1-225ENST00000515682 MCM10Q7L590 875 aa16.32■□□□□ 0.2
SH3TC1-225ENST00000515682 FOXO3O43524 673 aa16.32■□□□□ 0.2
SH3TC1-225ENST00000515682 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
SH3TC1-225ENST00000515682 LRRCC1Q9C099 1032 aa16.32■□□□□ 0.2
SH3TC1-225ENST00000515682 NRDCO43847 1150 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 HSP90B1P14625 803 aaKnown RBP16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 FAM184AQ8NB25 1140 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 MEIS3Q99687 375 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 YEATS2Q9ULM3 1422 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 TTC37Q6PGP7 1564 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 NOLC1Q14978 699 aaKnown RBP eCLIP16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 GNAI2P04899 355 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 BECN2A8MW95 431 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 FOSBP53539 338 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 KRT24Q2M2I5 525 aa16.31■□□□□ 0.2
SH3TC1-225ENST00000515682 RIMS2Q9UQ26 1411 aa16.3■□□□□ 0.2
SH3TC1-225ENST00000515682 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-225ENST00000515682 GSPT1P15170 499 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-225ENST00000515682 DTNBO60941 627 aa16.3■□□□□ 0.2
SH3TC1-225ENST00000515682 TPD52L1Q16890 204 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-225ENST00000515682 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
SH3TC1-225ENST00000515682 CAMK4Q16566 473 aa16.29■□□□□ 0.2
SH3TC1-225ENST00000515682 SAMD9LQ8IVG5 1584 aa16.29■□□□□ 0.2
SH3TC1-225ENST00000515682 CCDC183Q5T5S1 534 aa16.29■□□□□ 0.2
SH3TC1-225ENST00000515682 GPT2Q8TD30 523 aa16.29■□□□□ 0.2
SH3TC1-225ENST00000515682 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
SH3TC1-225ENST00000515682 ARHGEF5Q12774 1597 aa16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 LETM1O95202 739 aaPredicted RBP16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 USP48Q86UV5 1035 aa16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 PTPRTO14522 1441 aa16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 ZCCHC11Q5TAX3 1644 aaKnown RBP16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
SH3TC1-225ENST00000515682 H3BQV1 296 aa16.27■□□□□ 0.2
SH3TC1-225ENST00000515682 UBTFL1P0CB47 393 aaPredicted RBP16.27■□□□□ 0.2
SH3TC1-225ENST00000515682 MX1P20591 662 aa16.27■□□□□ 0.2
SH3TC1-225ENST00000515682 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
SH3TC1-225ENST00000515682 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
SH3TC1-225ENST00000515682 DCTPP1Q9H773 170 aa16.27■□□□□ 0.2
SH3TC1-225ENST00000515682 ZC3H6P61129 1189 aaKnown RBP16.27■□□□□ 0.2
SH3TC1-225ENST00000515682 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
SH3TC1-225ENST00000515682 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.19
SH3TC1-225ENST00000515682 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
SH3TC1-225ENST00000515682 C16orf45Q96MC5 204 aaPredicted RBP16.26■□□□□ 0.19
SH3TC1-225ENST00000515682 CCDC94Q9BW85 323 aaPredicted RBP16.26■□□□□ 0.19
SH3TC1-225ENST00000515682 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
SH3TC1-225ENST00000515682 CWC27Q6UX04 472 aaKnown RBP16.26■□□□□ 0.19
SH3TC1-225ENST00000515682 ANKRD44Q8N8A2 993 aa16.26■□□□□ 0.19
SH3TC1-225ENST00000515682 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
SH3TC1-225ENST00000515682 ZNF500O60304 480 aaPredicted RBP16.25■□□□□ 0.19
SH3TC1-225ENST00000515682 GNAI3P08754 354 aa16.25■□□□□ 0.19
SH3TC1-225ENST00000515682 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
SH3TC1-225ENST00000515682 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
SH3TC1-225ENST00000515682 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
SH3TC1-225ENST00000515682 NSD2O96028 1365 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms