RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 EYA1Q99502 592 aa13.21□□□□□ -0.29
RACK1-234ENST00000515417 RREB1Q92766 1687 aa13.21□□□□□ -0.3
RACK1-234ENST00000515417 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
RACK1-234ENST00000515417 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
RACK1-234ENST00000515417 MTHFSP49914 203 aa13.19□□□□□ -0.3
RACK1-234ENST00000515417 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
RACK1-234ENST00000515417 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
RACK1-234ENST00000515417 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
RACK1-234ENST00000515417 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
RACK1-234ENST00000515417 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
RACK1-234ENST00000515417 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
RACK1-234ENST00000515417 ZCRB1Q8TBF4 217 aaKnown RBP13.17□□□□□ -0.3
RACK1-234ENST00000515417 UTRNP46939 3433 aa13.16□□□□□ -0.3
RACK1-234ENST00000515417 NCAPD2Q15021 1401 aa13.16□□□□□ -0.3
RACK1-234ENST00000515417 KCNQ2O43526 872 aa13.16□□□□□ -0.3
RACK1-234ENST00000515417 PROM2Q8N271 834 aa13.16□□□□□ -0.3
RACK1-234ENST00000515417 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
RACK1-234ENST00000515417 IL13P35225 146 aa13.15□□□□□ -0.3
RACK1-234ENST00000515417 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
RACK1-234ENST00000515417 PPP1R1BQ9UD71 204 aaPredicted RBP13.15□□□□□ -0.3
RACK1-234ENST00000515417 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
RACK1-234ENST00000515417 SPON1Q9HCB6 807 aa13.14□□□□□ -0.31
RACK1-234ENST00000515417 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
RACK1-234ENST00000515417 CYP27B1O15528 508 aa13.13□□□□□ -0.31
RACK1-234ENST00000515417 PPP2R1AP30153 589 aa13.13□□□□□ -0.31
RACK1-234ENST00000515417 BCL11BQ9C0K0 894 aaPredicted RBP13.13□□□□□ -0.31
RACK1-234ENST00000515417 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
RACK1-234ENST00000515417 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
RACK1-234ENST00000515417 BCL9O00512 1426 aa13.13□□□□□ -0.31
RACK1-234ENST00000515417 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
RACK1-234ENST00000515417 HMOX1P09601 288 aa13.12□□□□□ -0.31
RACK1-234ENST00000515417 SULT6B1Q6IMI4 303 aa13.12□□□□□ -0.31
RACK1-234ENST00000515417 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
RACK1-234ENST00000515417 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
RACK1-234ENST00000515417 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
RACK1-234ENST00000515417 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
RACK1-234ENST00000515417 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
RACK1-234ENST00000515417 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
RACK1-234ENST00000515417 SBF2Q86WG5 1849 aa13.1□□□□□ -0.31
RACK1-234ENST00000515417 PTGER2P43116 358 aa13.09□□□□□ -0.31
RACK1-234ENST00000515417 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
RACK1-234ENST00000515417 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
RACK1-234ENST00000515417 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
RACK1-234ENST00000515417 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
RACK1-234ENST00000515417 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
RACK1-234ENST00000515417 NHSQ6T4R5 1651 aa13.08□□□□□ -0.32
RACK1-234ENST00000515417 KDRP35968 1356 aa13.07□□□□□ -0.32
RACK1-234ENST00000515417 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
RACK1-234ENST00000515417 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
RACK1-234ENST00000515417 DOT1LQ8TEK3 1739 aa13.07□□□□□ -0.32
RACK1-234ENST00000515417 PLSCR1O15162 318 aa13.06□□□□□ -0.32
RACK1-234ENST00000515417 PHKG2P15735 406 aa13.06□□□□□ -0.32
RACK1-234ENST00000515417 PLEKHO1Q53GL0 409 aaPredicted RBP13.06□□□□□ -0.32
RACK1-234ENST00000515417 KCNQ4P56696 695 aa13.05□□□□□ -0.32
RACK1-234ENST00000515417 TXNRD1Q16881 649 aa13.05□□□□□ -0.32
RACK1-234ENST00000515417 ZNF784Q8NCA9 323 aaPredicted RBP13.05□□□□□ -0.32
RACK1-234ENST00000515417 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
RACK1-234ENST00000515417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.32
RACK1-234ENST00000515417 TOGARAM1Q9Y4F4 1720 aa13.05□□□□□ -0.32
RACK1-234ENST00000515417 BTAF1O14981 1849 aa13.04□□□□□ -0.32
RACK1-234ENST00000515417 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
RACK1-234ENST00000515417 IFNL2Q8IZJ0 200 aa13.04□□□□□ -0.32
RACK1-234ENST00000515417 U2AF1L5P0DN76 240 aaPredicted RBP13.03□□□□□ -0.32
RACK1-234ENST00000515417 U2AF1Q01081 240 aaKnown RBP eCLIP13.03□□□□□ -0.32
RACK1-234ENST00000515417 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
RACK1-234ENST00000515417 RALBP1Q15311 655 aa13.03□□□□□ -0.32
RACK1-234ENST00000515417 SYT17Q9BSW7 474 aa13.03□□□□□ -0.32
RACK1-234ENST00000515417 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
RACK1-234ENST00000515417 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.33
RACK1-234ENST00000515417 PIGBQ92521 554 aa13.02□□□□□ -0.33
RACK1-234ENST00000515417 PRKAR2BP31323 418 aa13.01□□□□□ -0.33
RACK1-234ENST00000515417 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
RACK1-234ENST00000515417 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
RACK1-234ENST00000515417 C1orf141Q5JVX7 400 aa13.01□□□□□ -0.33
RACK1-234ENST00000515417 SGIP1Q9BQI5 828 aa13.01□□□□□ -0.33
RACK1-234ENST00000515417 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
RACK1-234ENST00000515417 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
RACK1-234ENST00000515417 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
RACK1-234ENST00000515417 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
RACK1-234ENST00000515417 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
RACK1-234ENST00000515417 DCAF8L1A6NGE4 600 aa13□□□□□ -0.33
RACK1-234ENST00000515417 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
RACK1-234ENST00000515417 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
RACK1-234ENST00000515417 PALLDQ8WX93 1383 aa12.99□□□□□ -0.33
RACK1-234ENST00000515417 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
RACK1-234ENST00000515417 DCAF5Q96JK2 942 aa12.99□□□□□ -0.33
RACK1-234ENST00000515417 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
RACK1-234ENST00000515417 STK32BQ9NY57 414 aa12.99□□□□□ -0.33
RACK1-234ENST00000515417 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
RACK1-234ENST00000515417 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
RACK1-234ENST00000515417 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
RACK1-234ENST00000515417 GOLGB1Q14789 3259 aaKnown RBP12.98□□□□□ -0.33
RACK1-234ENST00000515417 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
RACK1-234ENST00000515417 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
RACK1-234ENST00000515417 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
RACK1-234ENST00000515417 CABP4P57796 275 aa12.97□□□□□ -0.33
RACK1-234ENST00000515417 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
RACK1-234ENST00000515417 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.33
RACK1-234ENST00000515417 ERVV-2B6SEH9 535 aa12.96□□□□□ -0.33
RACK1-234ENST00000515417 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms