RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 NEFMP07197 916 aa18.8■□□□□ 0.6
APBB3-221ENST00000515056 COL14A1Q05707 1796 aaKnown RBP18.8■□□□□ 0.6
APBB3-221ENST00000515056 PDE3AQ14432 1141 aa18.8■□□□□ 0.6
APBB3-221ENST00000515056 WDR63Q8IWG1 891 aa18.8■□□□□ 0.6
APBB3-221ENST00000515056 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
APBB3-221ENST00000515056 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
APBB3-221ENST00000515056 CSB-PGBD3P0DP91 1061 aa18.79■□□□□ 0.6
APBB3-221ENST00000515056 ABCC6O95255 1503 aa18.79■□□□□ 0.6
APBB3-221ENST00000515056 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
APBB3-221ENST00000515056 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
APBB3-221ENST00000515056 EYA1Q99502 592 aa18.78■□□□□ 0.6
APBB3-221ENST00000515056 SLIT2O94813 1529 aa18.78■□□□□ 0.6
APBB3-221ENST00000515056 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
APBB3-221ENST00000515056 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
APBB3-221ENST00000515056 COL5A2P05997 1499 aaPredicted RBP18.78■□□□□ 0.6
APBB3-221ENST00000515056 UNC5CLQ8IV45 518 aa18.77■□□□□ 0.6
APBB3-221ENST00000515056 USP21Q9UK80 565 aa18.77■□□□□ 0.6
APBB3-221ENST00000515056 WDR17Q8IZU2 1322 aa18.77■□□□□ 0.59
APBB3-221ENST00000515056 NLRP2Q9NX02 1062 aa18.77■□□□□ 0.59
APBB3-221ENST00000515056 TOM1L2Q6ZVM7 507 aa18.76■□□□□ 0.59
APBB3-221ENST00000515056 AFF2P51816 1311 aa18.76■□□□□ 0.59
APBB3-221ENST00000515056 BCL9LQ86UU0 1499 aa18.75■□□□□ 0.59
APBB3-221ENST00000515056 U2AF1L5P0DN76 240 aaPredicted RBP18.75■□□□□ 0.59
APBB3-221ENST00000515056 U2AF1Q01081 240 aaKnown RBP eCLIP18.75■□□□□ 0.59
APBB3-221ENST00000515056 TCP11L2Q8N4U5 519 aa18.75■□□□□ 0.59
APBB3-221ENST00000515056 BCAR3O75815 825 aa18.75■□□□□ 0.59
APBB3-221ENST00000515056 AAMPQ13685 434 aa18.74■□□□□ 0.59
APBB3-221ENST00000515056 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
APBB3-221ENST00000515056 PLCH1Q4KWH8 1693 aa18.73■□□□□ 0.59
APBB3-221ENST00000515056 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
APBB3-221ENST00000515056 HMOX1P09601 288 aa18.73■□□□□ 0.59
APBB3-221ENST00000515056 SULT6B1Q6IMI4 303 aa18.73■□□□□ 0.59
APBB3-221ENST00000515056 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
APBB3-221ENST00000515056 CARD10Q9BWT7 1032 aa18.72■□□□□ 0.59
APBB3-221ENST00000515056 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
APBB3-221ENST00000515056 AEBP1Q8IUX7 1158 aa18.71■□□□□ 0.59
APBB3-221ENST00000515056 RGPD2P0DJD1 1756 aa18.71■□□□□ 0.59
APBB3-221ENST00000515056 GSE1Q14687 1217 aa18.7■□□□□ 0.58
APBB3-221ENST00000515056 VPS72Q15906 364 aa18.7■□□□□ 0.58
APBB3-221ENST00000515056 CCDC9Q9Y3X0 531 aaKnown RBP18.7■□□□□ 0.58
APBB3-221ENST00000515056 CRB1P82279 1406 aa18.7■□□□□ 0.58
APBB3-221ENST00000515056 FCHSD2O94868 740 aa18.7■□□□□ 0.58
APBB3-221ENST00000515056 BRPF3Q9ULD4 1205 aa18.69■□□□□ 0.58
APBB3-221ENST00000515056 QTRT2Q9H974 415 aaKnown RBP18.69■□□□□ 0.58
APBB3-221ENST00000515056 NRAPQ86VF7 1730 aa18.68■□□□□ 0.58
APBB3-221ENST00000515056 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
APBB3-221ENST00000515056 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
APBB3-221ENST00000515056 DDRGK1Q96HY6 314 aa18.68■□□□□ 0.58
APBB3-221ENST00000515056 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
APBB3-221ENST00000515056 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
APBB3-221ENST00000515056 RARSP54136 660 aaKnown RBP18.67■□□□□ 0.58
APBB3-221ENST00000515056 FAM161AQ3B820 660 aa18.67■□□□□ 0.58
APBB3-221ENST00000515056 ZNF772Q68DY9 489 aaPredicted RBP18.67■□□□□ 0.58
APBB3-221ENST00000515056 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
APBB3-221ENST00000515056 KDRP35968 1356 aa18.67■□□□□ 0.58
APBB3-221ENST00000515056 RGPD1P0DJD0 1748 aa18.67■□□□□ 0.58
APBB3-221ENST00000515056 CT47B1P0C2W7 299 aaPredicted RBP18.67■□□□□ 0.58
APBB3-221ENST00000515056 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
APBB3-221ENST00000515056 NPM2Q86SE8 214 aaKnown RBP18.66■□□□□ 0.58
APBB3-221ENST00000515056 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
APBB3-221ENST00000515056 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
APBB3-221ENST00000515056 GJD4Q96KN9 370 aaPredicted RBP18.65■□□□□ 0.58
APBB3-221ENST00000515056 RGS17Q9UGC6 210 aaPredicted RBP18.65■□□□□ 0.58
APBB3-221ENST00000515056 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
APBB3-221ENST00000515056 PLEKHF1Q96S99 279 aa18.65■□□□□ 0.58
APBB3-221ENST00000515056 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
APBB3-221ENST00000515056 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
APBB3-221ENST00000515056 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
APBB3-221ENST00000515056 NCAPD2Q15021 1401 aa18.65■□□□□ 0.58
APBB3-221ENST00000515056 FAM208AQ9UK61 1670 aaKnown RBP18.65■□□□□ 0.58
APBB3-221ENST00000515056 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
APBB3-221ENST00000515056 CLUAP1Q96AJ1 413 aa18.64■□□□□ 0.57
APBB3-221ENST00000515056 PKNOX2Q96KN3 472 aa18.64■□□□□ 0.57
APBB3-221ENST00000515056 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
APBB3-221ENST00000515056 IL2RBP14784 551 aa18.63■□□□□ 0.57
APBB3-221ENST00000515056 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
APBB3-221ENST00000515056 SKAP1Q86WV1 359 aa18.63■□□□□ 0.57
APBB3-221ENST00000515056 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
APBB3-221ENST00000515056 ATRNO75882 1429 aa18.63■□□□□ 0.57
APBB3-221ENST00000515056 FAM43AQ8N2R8 423 aa18.62■□□□□ 0.57
APBB3-221ENST00000515056 TATP17735 454 aaPredicted RBP18.62■□□□□ 0.57
APBB3-221ENST00000515056 BARGINQ6ZT62 677 aa18.62■□□□□ 0.57
APBB3-221ENST00000515056 FAM98CQ17RN3 349 aaKnown RBP18.61■□□□□ 0.57
APBB3-221ENST00000515056 C8orf34Q49A92 452 aa18.61■□□□□ 0.57
APBB3-221ENST00000515056 IL16Q14005 1332 aa18.61■□□□□ 0.57
APBB3-221ENST00000515056 IGHDP01880 384 aa18.59■□□□□ 0.57
APBB3-221ENST00000515056 PANK1Q8TE04 598 aa18.59■□□□□ 0.57
APBB3-221ENST00000515056 COG6Q9Y2V7 657 aa18.59■□□□□ 0.57
APBB3-221ENST00000515056 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
APBB3-221ENST00000515056 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.57
APBB3-221ENST00000515056 MEGF6O75095 1541 aa18.58■□□□□ 0.57
APBB3-221ENST00000515056 ONECUT3O60422 494 aaPredicted RBP18.58■□□□□ 0.57
APBB3-221ENST00000515056 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.57
APBB3-221ENST00000515056 PLEKHO1Q53GL0 409 aaPredicted RBP18.58■□□□□ 0.57
APBB3-221ENST00000515056 POTEAQ6S8J7 498 aa18.58■□□□□ 0.57
APBB3-221ENST00000515056 RBM6P78332 1123 aaKnown RBP18.58■□□□□ 0.56
APBB3-221ENST00000515056 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
APBB3-221ENST00000515056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.58■□□□□ 0.56
APBB3-221ENST00000515056 AMOTQ4VCS5 1084 aa18.57■□□□□ 0.56
APBB3-221ENST00000515056 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms