RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 NSD2O96028 1365 aa18.51■□□□□ 0.55
PFDN1-206ENST00000514611 INSRP06213 1382 aa18.51■□□□□ 0.55
PFDN1-206ENST00000514611 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
PFDN1-206ENST00000514611 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
PFDN1-206ENST00000514611 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
PFDN1-206ENST00000514611 LRRC4BQ9NT99 713 aa18.5■□□□□ 0.55
PFDN1-206ENST00000514611 EMILIN1Q9Y6C2 1016 aa18.5■□□□□ 0.55
PFDN1-206ENST00000514611 ZNF827Q17R98 1081 aa18.49■□□□□ 0.55
PFDN1-206ENST00000514611 KIF24Q5T7B8 1368 aa18.48■□□□□ 0.55
PFDN1-206ENST00000514611 PTGER2P43116 358 aa18.48■□□□□ 0.55
PFDN1-206ENST00000514611 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
PFDN1-206ENST00000514611 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
PFDN1-206ENST00000514611 RAPGEF4Q8WZA2 1011 aa18.47■□□□□ 0.55
PFDN1-206ENST00000514611 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
PFDN1-206ENST00000514611 ANKRD26Q9UPS8 1709 aa18.46■□□□□ 0.55
PFDN1-206ENST00000514611 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
PFDN1-206ENST00000514611 KCNQ4P56696 695 aa18.45■□□□□ 0.54
PFDN1-206ENST00000514611 CGNL1Q0VF96 1302 aa18.45■□□□□ 0.54
PFDN1-206ENST00000514611 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
PFDN1-206ENST00000514611 TATP17735 454 aaPredicted RBP18.44■□□□□ 0.54
PFDN1-206ENST00000514611 MTFR1LQ9H019 292 aa18.44■□□□□ 0.54
PFDN1-206ENST00000514611 EIF4G2P78344 907 aaKnown RBP eCLIP18.43■□□□□ 0.54
PFDN1-206ENST00000514611 SLC27A3Q5K4L6 730 aa18.43■□□□□ 0.54
PFDN1-206ENST00000514611 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
PFDN1-206ENST00000514611 NCAPD2Q15021 1401 aa18.42■□□□□ 0.54
PFDN1-206ENST00000514611 SGIP1Q9BQI5 828 aa18.42■□□□□ 0.54
PFDN1-206ENST00000514611 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
PFDN1-206ENST00000514611 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
PFDN1-206ENST00000514611 LY75O60449 1722 aa18.41■□□□□ 0.54
PFDN1-206ENST00000514611 UTRNP46939 3433 aa18.41■□□□□ 0.54
PFDN1-206ENST00000514611 KAT6BQ8WYB5 2073 aa18.4■□□□□ 0.54
PFDN1-206ENST00000514611 CYP27B1O15528 508 aa18.39■□□□□ 0.53
PFDN1-206ENST00000514611 TNNT2P45379 298 aaPredicted RBP18.39■□□□□ 0.53
PFDN1-206ENST00000514611 FHDC1Q9C0D6 1143 aaPredicted RBP18.39■□□□□ 0.53
PFDN1-206ENST00000514611 POLKQ9UBT6 870 aa18.39■□□□□ 0.53
PFDN1-206ENST00000514611 PKD1L3Q7Z443 1732 aa18.39■□□□□ 0.53
PFDN1-206ENST00000514611 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.53
PFDN1-206ENST00000514611 WASHC2AQ641Q2 1341 aa18.39■□□□□ 0.53
PFDN1-206ENST00000514611 PNPLA7Q6ZV29 1317 aa18.39■□□□□ 0.53
PFDN1-206ENST00000514611 TUBGCP6Q96RT7 1819 aa18.38■□□□□ 0.53
PFDN1-206ENST00000514611 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
PFDN1-206ENST00000514611 PANK3Q9H999 370 aa18.37■□□□□ 0.53
PFDN1-206ENST00000514611 QSER1Q2KHR3 1735 aa18.37■□□□□ 0.53
PFDN1-206ENST00000514611 EYA1Q99502 592 aa18.36■□□□□ 0.53
PFDN1-206ENST00000514611 TFCP2L1Q9NZI6 479 aa18.36■□□□□ 0.53
PFDN1-206ENST00000514611 SYT17Q9BSW7 474 aa18.35■□□□□ 0.53
PFDN1-206ENST00000514611 PALLDQ8WX93 1383 aa18.34■□□□□ 0.53
PFDN1-206ENST00000514611 YY1P25490 414 aa18.34■□□□□ 0.53
PFDN1-206ENST00000514611 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
PFDN1-206ENST00000514611 MPRIPQ6WCQ1 1025 aa18.34■□□□□ 0.53
PFDN1-206ENST00000514611 ARXQ96QS3 562 aa18.34■□□□□ 0.53
PFDN1-206ENST00000514611 MAP2P11137 1827 aaKnown RBP18.34■□□□□ 0.53
PFDN1-206ENST00000514611 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
PFDN1-206ENST00000514611 C5P01031 1676 aa18.31■□□□□ 0.52
PFDN1-206ENST00000514611 SLC16A10Q8TF71 515 aa18.31■□□□□ 0.52
PFDN1-206ENST00000514611 SPG7Q9UQ90 795 aa18.31■□□□□ 0.52
PFDN1-206ENST00000514611 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
PFDN1-206ENST00000514611 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
PFDN1-206ENST00000514611 ITGB4P16144 1822 aa18.29■□□□□ 0.52
PFDN1-206ENST00000514611 NKX1-1Q15270 411 aaPredicted RBP18.29■□□□□ 0.52
PFDN1-206ENST00000514611 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
PFDN1-206ENST00000514611 PHKG2P15735 406 aa18.28■□□□□ 0.52
PFDN1-206ENST00000514611 COL23A1Q86Y22 540 aaPredicted RBP18.28■□□□□ 0.52
PFDN1-206ENST00000514611 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
PFDN1-206ENST00000514611 PIGBQ92521 554 aa18.28■□□□□ 0.52
PFDN1-206ENST00000514611 GOLGB1Q14789 3259 aaKnown RBP18.27■□□□□ 0.52
PFDN1-206ENST00000514611 MSH5O43196 834 aa18.27■□□□□ 0.52
PFDN1-206ENST00000514611 POLD1P28340 1107 aa18.27■□□□□ 0.52
PFDN1-206ENST00000514611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.27■□□□□ 0.52
PFDN1-206ENST00000514611 KIF7Q2M1P5 1343 aa18.26■□□□□ 0.51
PFDN1-206ENST00000514611 C4BP0C0L5 1744 aa18.26■□□□□ 0.51
PFDN1-206ENST00000514611 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
PFDN1-206ENST00000514611 MORC1Q86VD1 984 aa18.25■□□□□ 0.51
PFDN1-206ENST00000514611 IFNL2Q8IZJ0 200 aa18.25■□□□□ 0.51
PFDN1-206ENST00000514611 SMARCC1Q92922 1105 aaPredicted RBP18.25■□□□□ 0.51
PFDN1-206ENST00000514611 TAF1LQ8IZX4 1826 aa18.25■□□□□ 0.51
PFDN1-206ENST00000514611 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
PFDN1-206ENST00000514611 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
PFDN1-206ENST00000514611 PLEKHG2Q9H7P9 1386 aa18.23■□□□□ 0.51
PFDN1-206ENST00000514611 AEBP1Q8IUX7 1158 aa18.23■□□□□ 0.51
PFDN1-206ENST00000514611 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
PFDN1-206ENST00000514611 SMIM5Q71RC9 77 aa18.22■□□□□ 0.51
PFDN1-206ENST00000514611 NLGN2Q8NFZ4 835 aa18.22■□□□□ 0.51
PFDN1-206ENST00000514611 AK7Q96M32 723 aa18.22■□□□□ 0.51
PFDN1-206ENST00000514611 ASAP1Q9ULH1 1129 aa18.22■□□□□ 0.51
PFDN1-206ENST00000514611 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
PFDN1-206ENST00000514611 SIK1P57059 783 aa18.21■□□□□ 0.51
PFDN1-206ENST00000514611 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
PFDN1-206ENST00000514611 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
PFDN1-206ENST00000514611 PHF14O94880 888 aa18.2■□□□□ 0.5
PFDN1-206ENST00000514611 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
PFDN1-206ENST00000514611 ITPK1Q13572 414 aa18.19■□□□□ 0.5
PFDN1-206ENST00000514611 ATG3Q9NT62 314 aa18.19■□□□□ 0.5
PFDN1-206ENST00000514611 GPR162Q16538 588 aa18.18■□□□□ 0.5
PFDN1-206ENST00000514611 ZNF530Q6P9A1 599 aaPredicted RBP18.18■□□□□ 0.5
PFDN1-206ENST00000514611 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
PFDN1-206ENST00000514611 KDRP35968 1356 aa18.17■□□□□ 0.5
PFDN1-206ENST00000514611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.17■□□□□ 0.5
PFDN1-206ENST00000514611 IL13P35225 146 aa18.17■□□□□ 0.5
PFDN1-206ENST00000514611 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms