RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 POLKQ9UBT6 870 aa26.84■■□□□ 1.89
CCHCR1-230ENST00000513222 ZCRB1Q8TBF4 217 aaKnown RBP26.83■■□□□ 1.89
CCHCR1-230ENST00000513222 TXNRD1Q16881 649 aa26.81■■□□□ 1.88
CCHCR1-230ENST00000513222 PKD1L3Q7Z443 1732 aa26.8■■□□□ 1.88
CCHCR1-230ENST00000513222 CASZ1Q86V15 1759 aa26.8■■□□□ 1.88
CCHCR1-230ENST00000513222 DOT1LQ8TEK3 1739 aa26.79■■□□□ 1.88
CCHCR1-230ENST00000513222 DDX54Q8TDD1 881 aaKnown RBP26.79■■□□□ 1.88
CCHCR1-230ENST00000513222 PAPPAQ13219 1627 aa26.79■■□□□ 1.88
CCHCR1-230ENST00000513222 ACSBG1Q96GR2 724 aa26.78■■□□□ 1.88
CCHCR1-230ENST00000513222 POLR3GLQ9BT43 218 aa26.78■■□□□ 1.88
CCHCR1-230ENST00000513222 PLEKHG2Q9H7P9 1386 aa26.77■■□□□ 1.88
CCHCR1-230ENST00000513222 RAPGEF4Q8WZA2 1011 aa26.77■■□□□ 1.88
CCHCR1-230ENST00000513222 ANO8Q9HCE9 1232 aaPredicted RBP26.77■■□□□ 1.88
CCHCR1-230ENST00000513222 LY75O60449 1722 aa26.76■■□□□ 1.88
CCHCR1-230ENST00000513222 KIF7Q2M1P5 1343 aa26.76■■□□□ 1.87
CCHCR1-230ENST00000513222 USHBP1Q8N6Y0 703 aa26.75■■□□□ 1.87
CCHCR1-230ENST00000513222 TATP17735 454 aaPredicted RBP26.74■■□□□ 1.87
CCHCR1-230ENST00000513222 AMER1Q5JTC6 1135 aaPredicted RBP26.72■■□□□ 1.87
CCHCR1-230ENST00000513222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.72■■□□□ 1.87
CCHCR1-230ENST00000513222 PER1O15534 1290 aaPredicted RBP26.71■■□□□ 1.87
CCHCR1-230ENST00000513222 EYA1Q99502 592 aa26.71■■□□□ 1.87
CCHCR1-230ENST00000513222 QSER1Q2KHR3 1735 aa26.7■■□□□ 1.87
CCHCR1-230ENST00000513222 PCDH11XQ9BZA7 1347 aa26.7■■□□□ 1.87
CCHCR1-230ENST00000513222 PCDH11YQ9BZA8 1340 aa26.7■■□□□ 1.87
CCHCR1-230ENST00000513222 PRIM1P49642 420 aaKnown RBP26.7■■□□□ 1.86
CCHCR1-230ENST00000513222 PPM1GO15355 546 aaPredicted RBP26.69■■□□□ 1.86
CCHCR1-230ENST00000513222 SLC15A2Q16348 729 aa26.69■■□□□ 1.86
CCHCR1-230ENST00000513222 SLC27A3Q5K4L6 730 aa26.69■■□□□ 1.86
CCHCR1-230ENST00000513222 KNSTRNQ9Y448 316 aa26.69■■□□□ 1.86
CCHCR1-230ENST00000513222 ITGB4P16144 1822 aa26.68■■□□□ 1.86
CCHCR1-230ENST00000513222 CYP27B1O15528 508 aa26.68■■□□□ 1.86
CCHCR1-230ENST00000513222 EIF4A2Q14240 407 aaKnown RBP26.68■■□□□ 1.86
CCHCR1-230ENST00000513222 NKX1-1Q15270 411 aaPredicted RBP26.68■■□□□ 1.86
CCHCR1-230ENST00000513222 LRRC4BQ9NT99 713 aa26.67■■□□□ 1.86
CCHCR1-230ENST00000513222 IGSF1Q8N6C5 1336 aa26.65■■□□□ 1.86
CCHCR1-230ENST00000513222 TOGARAM1Q9Y4F4 1720 aa26.65■■□□□ 1.86
CCHCR1-230ENST00000513222 SPON1Q9HCB6 807 aa26.65■■□□□ 1.86
CCHCR1-230ENST00000513222 STK32BQ9NY57 414 aa26.65■■□□□ 1.86
CCHCR1-230ENST00000513222 MORC1Q86VD1 984 aa26.64■■□□□ 1.86
CCHCR1-230ENST00000513222 TNNT2P45379 298 aaPredicted RBP26.63■■□□□ 1.85
CCHCR1-230ENST00000513222 NPC1L1Q9UHC9 1359 aa26.62■■□□□ 1.85
CCHCR1-230ENST00000513222 AKT1S1Q96B36 256 aa26.61■■□□□ 1.85
CCHCR1-230ENST00000513222 PDGFDQ9GZP0 370 aaPredicted RBP26.61■■□□□ 1.85
CCHCR1-230ENST00000513222 SPG7Q9UQ90 795 aa26.61■■□□□ 1.85
CCHCR1-230ENST00000513222 COL24A1Q17RW2 1714 aa26.6■■□□□ 1.85
CCHCR1-230ENST00000513222 SYTL4Q96C24 671 aaPredicted RBP26.59■■□□□ 1.85
CCHCR1-230ENST00000513222 TAF1LQ8IZX4 1826 aa26.58■■□□□ 1.84
CCHCR1-230ENST00000513222 TUBGCP6Q96RT7 1819 aa26.58■■□□□ 1.84
CCHCR1-230ENST00000513222 ZNF827Q17R98 1081 aa26.56■■□□□ 1.84
CCHCR1-230ENST00000513222 KDRP35968 1356 aa26.56■■□□□ 1.84
CCHCR1-230ENST00000513222 PTGER2P43116 358 aa26.55■■□□□ 1.84
CCHCR1-230ENST00000513222 HMGB2P26583 209 aaKnown RBP26.54■■□□□ 1.84
CCHCR1-230ENST00000513222 SGIP1Q9BQI5 828 aa26.54■■□□□ 1.84
CCHCR1-230ENST00000513222 PHKG2P15735 406 aa26.53■■□□□ 1.84
CCHCR1-230ENST00000513222 IFNL2Q8IZJ0 200 aa26.53■■□□□ 1.84
CCHCR1-230ENST00000513222 MTFR1LQ9H019 292 aa26.53■■□□□ 1.84
CCHCR1-230ENST00000513222 C5P01031 1676 aa26.52■■□□□ 1.84
CCHCR1-230ENST00000513222 IL13P35225 146 aa26.52■■□□□ 1.84
CCHCR1-230ENST00000513222 SLC16A10Q8TF71 515 aa26.51■■□□□ 1.83
CCHCR1-230ENST00000513222 PIGBQ92521 554 aa26.5■■□□□ 1.83
CCHCR1-230ENST00000513222 SMARCC1Q92922 1105 aaPredicted RBP26.49■■□□□ 1.83
CCHCR1-230ENST00000513222 CCNL1Q9UK58 526 aaPredicted RBP26.49■■□□□ 1.83
CCHCR1-230ENST00000513222 PALLDQ8WX93 1383 aa26.48■■□□□ 1.83
CCHCR1-230ENST00000513222 ZBTB7AO95365 584 aa26.48■■□□□ 1.83
CCHCR1-230ENST00000513222 AMOTQ4VCS5 1084 aa26.48■■□□□ 1.83
CCHCR1-230ENST00000513222 MPRIPQ6WCQ1 1025 aa26.48■■□□□ 1.83
CCHCR1-230ENST00000513222 ZNF831Q5JPB2 1677 aa26.47■■□□□ 1.83
CCHCR1-230ENST00000513222 MTHFSP49914 203 aa26.47■■□□□ 1.83
CCHCR1-230ENST00000513222 PNPLA7Q6ZV29 1317 aa26.46■■□□□ 1.83
CCHCR1-230ENST00000513222 KCNQ4P56696 695 aa26.46■■□□□ 1.83
CCHCR1-230ENST00000513222 PLEKHO1Q53GL0 409 aaPredicted RBP26.46■■□□□ 1.83
CCHCR1-230ENST00000513222 ERVV-2B6SEH9 535 aa26.44■■□□□ 1.82
CCHCR1-230ENST00000513222 HSP90AB1P08238 724 aaKnown RBP26.44■■□□□ 1.82
CCHCR1-230ENST00000513222 AEBP1Q8IUX7 1158 aa26.43■■□□□ 1.82
CCHCR1-230ENST00000513222 DCAF5Q96JK2 942 aa26.43■■□□□ 1.82
CCHCR1-230ENST00000513222 PPP1R1BQ9UD71 204 aaPredicted RBP26.43■■□□□ 1.82
CCHCR1-230ENST00000513222 ATF5Q9Y2D1 282 aaPredicted RBP26.43■■□□□ 1.82
CCHCR1-230ENST00000513222 SULT6B1Q6IMI4 303 aa26.42■■□□□ 1.82
CCHCR1-230ENST00000513222 C4BP0C0L5 1744 aa26.42■■□□□ 1.82
CCHCR1-230ENST00000513222 SCN11AQ9UI33 1791 aa26.41■■□□□ 1.82
CCHCR1-230ENST00000513222 UBR3Q6ZT12 1888 aa26.41■■□□□ 1.82
CCHCR1-230ENST00000513222 CC2D1BQ5T0F9 858 aaKnown RBP26.41■■□□□ 1.82
CCHCR1-230ENST00000513222 TMOD3Q9NYL9 352 aa26.41■■□□□ 1.82
CCHCR1-230ENST00000513222 TFCP2L1Q9NZI6 479 aa26.41■■□□□ 1.82
CCHCR1-230ENST00000513222 MAP3K5Q99683 1374 aa26.41■■□□□ 1.82
CCHCR1-230ENST00000513222 COL3A1P02461 1466 aaPredicted RBP26.4■■□□□ 1.82
CCHCR1-230ENST00000513222 KDM6AO15550 1401 aaPredicted RBP26.39■■□□□ 1.82
CCHCR1-230ENST00000513222 ATG3Q9NT62 314 aa26.37■■□□□ 1.81
CCHCR1-230ENST00000513222 ASAP1Q9ULH1 1129 aa26.37■■□□□ 1.81
CCHCR1-230ENST00000513222 VIRMAQ69YN4 1812 aaKnown RBP26.37■■□□□ 1.81
CCHCR1-230ENST00000513222 ADAMTS7Q9UKP4 1686 aa26.36■■□□□ 1.81
CCHCR1-230ENST00000513222 LOC102724428A0A0B4J2F2 783 aa26.36■■□□□ 1.81
CCHCR1-230ENST00000513222 SIK1P57059 783 aa26.36■■□□□ 1.81
CCHCR1-230ENST00000513222 ZNF530Q6P9A1 599 aaPredicted RBP26.36■■□□□ 1.81
CCHCR1-230ENST00000513222 FLAD1Q8NFF5 587 aa26.36■■□□□ 1.81
CCHCR1-230ENST00000513222 DIAPH1O60610 1272 aaKnown RBP26.35■■□□□ 1.81
CCHCR1-230ENST00000513222 COL23A1Q86Y22 540 aaPredicted RBP26.35■■□□□ 1.81
CCHCR1-230ENST00000513222 ARXQ96QS3 562 aa26.34■■□□□ 1.81
CCHCR1-230ENST00000513222 SYT17Q9BSW7 474 aa26.33■■□□□ 1.81
CCHCR1-230ENST00000513222 CICQ96RK0 1608 aaPredicted RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms