RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PLEKHF1Q96S99 279 aa14.29□□□□□ -0.12
PFDN1-204ENST00000512707 NCAPD2Q15021 1401 aa14.29□□□□□ -0.12
PFDN1-204ENST00000512707 SLIT2O94813 1529 aa14.29□□□□□ -0.12
PFDN1-204ENST00000512707 TATP17735 454 aaPredicted RBP14.28□□□□□ -0.12
PFDN1-204ENST00000512707 LMOD3Q0VAK6 560 aa14.28□□□□□ -0.12
PFDN1-204ENST00000512707 LARP1Q6PKG0 1096 aaKnown RBP14.28□□□□□ -0.12
PFDN1-204ENST00000512707 SRCAPQ6ZRS2 3230 aa14.27□□□□□ -0.12
PFDN1-204ENST00000512707 ZBED9Q6R2W3 1325 aa14.27□□□□□ -0.12
PFDN1-204ENST00000512707 AMOTQ4VCS5 1084 aa14.27□□□□□ -0.13
PFDN1-204ENST00000512707 PLEKHO1Q53GL0 409 aaPredicted RBP14.27□□□□□ -0.13
PFDN1-204ENST00000512707 UNC5CLQ8IV45 518 aa14.27□□□□□ -0.13
PFDN1-204ENST00000512707 GAS2L2Q8NHY3 880 aa14.27□□□□□ -0.13
PFDN1-204ENST00000512707 CCDC9Q9Y3X0 531 aaKnown RBP14.27□□□□□ -0.13
PFDN1-204ENST00000512707 ATRNO75882 1429 aa14.26□□□□□ -0.13
PFDN1-204ENST00000512707 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
PFDN1-204ENST00000512707 NFE2L2Q16236 605 aa14.26□□□□□ -0.13
PFDN1-204ENST00000512707 FNBP4Q8N3X1 1017 aaPredicted RBP14.26□□□□□ -0.13
PFDN1-204ENST00000512707 USP21Q9UK80 565 aa14.26□□□□□ -0.13
PFDN1-204ENST00000512707 EP400Q96L91 3159 aa14.25□□□□□ -0.13
PFDN1-204ENST00000512707 RGPD2P0DJD1 1756 aa14.25□□□□□ -0.13
PFDN1-204ENST00000512707 NRAPQ86VF7 1730 aa14.25□□□□□ -0.13
PFDN1-204ENST00000512707 IL2RBP14784 551 aa14.25□□□□□ -0.13
PFDN1-204ENST00000512707 TMPOP42166 694 aaKnown RBP14.25□□□□□ -0.13
PFDN1-204ENST00000512707 NEUROD2Q15784 382 aa14.25□□□□□ -0.13
PFDN1-204ENST00000512707 CDCA7Q9BWT1 371 aaPredicted RBP14.25□□□□□ -0.13
PFDN1-204ENST00000512707 USP35Q9P2H5 1018 aa14.25□□□□□ -0.13
PFDN1-204ENST00000512707 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
PFDN1-204ENST00000512707 THRAP3Q9Y2W1 955 aaKnown RBP14.25□□□□□ -0.13
PFDN1-204ENST00000512707 RIPK4P57078 832 aa14.24□□□□□ -0.13
PFDN1-204ENST00000512707 CALD1Q05682 793 aaKnown RBP14.24□□□□□ -0.13
PFDN1-204ENST00000512707 PHACTR3Q96KR7 559 aa14.24□□□□□ -0.13
PFDN1-204ENST00000512707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.24□□□□□ -0.13
PFDN1-204ENST00000512707 TRPC5Q9UL62 973 aaPredicted RBP14.24□□□□□ -0.13
PFDN1-204ENST00000512707 SALL2Q9Y467 1007 aaPredicted RBP14.24□□□□□ -0.13
PFDN1-204ENST00000512707 PARP4Q9UKK3 1724 aaKnown RBP14.24□□□□□ -0.13
PFDN1-204ENST00000512707 CENPBP07199 599 aaPredicted RBP14.23□□□□□ -0.13
PFDN1-204ENST00000512707 VPS72Q15906 364 aa14.23□□□□□ -0.13
PFDN1-204ENST00000512707 CCDC27Q2M243 656 aa14.23□□□□□ -0.13
PFDN1-204ENST00000512707 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
PFDN1-204ENST00000512707 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
PFDN1-204ENST00000512707 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
PFDN1-204ENST00000512707 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.23□□□□□ -0.13
PFDN1-204ENST00000512707 SPATA31A1Q5TZJ5 1347 aa14.22□□□□□ -0.13
PFDN1-204ENST00000512707 SPATA31A5Q5VU36 1347 aa14.22□□□□□ -0.13
PFDN1-204ENST00000512707 SPATA31A7Q8IWB4 1347 aa14.22□□□□□ -0.13
PFDN1-204ENST00000512707 BCL9LQ86UU0 1499 aa14.22□□□□□ -0.13
PFDN1-204ENST00000512707 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
PFDN1-204ENST00000512707 PDE3BQ13370 1112 aa14.21□□□□□ -0.13
PFDN1-204ENST00000512707 MTHFSDQ2M296 383 aaKnown RBP14.21□□□□□ -0.13
PFDN1-204ENST00000512707 ZNF530Q6P9A1 599 aaPredicted RBP14.21□□□□□ -0.13
PFDN1-204ENST00000512707 MAP3K5Q99683 1374 aa14.21□□□□□ -0.14
PFDN1-204ENST00000512707 MEGF6O75095 1541 aa14.2□□□□□ -0.14
PFDN1-204ENST00000512707 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
PFDN1-204ENST00000512707 GNAT3A8MTJ3 354 aa14.2□□□□□ -0.14
PFDN1-204ENST00000512707 HTATSF1O43719 755 aaKnown RBP14.2□□□□□ -0.14
PFDN1-204ENST00000512707 PCDH11XQ9BZA7 1347 aa14.19□□□□□ -0.14
PFDN1-204ENST00000512707 PCDH11YQ9BZA8 1340 aa14.19□□□□□ -0.14
PFDN1-204ENST00000512707 HSP90AB1P08238 724 aaKnown RBP14.19□□□□□ -0.14
PFDN1-204ENST00000512707 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
PFDN1-204ENST00000512707 AKAP4Q5JQC9 854 aa14.19□□□□□ -0.14
PFDN1-204ENST00000512707 BARGINQ6ZT62 677 aa14.19□□□□□ -0.14
PFDN1-204ENST00000512707 WWC1Q8IX03 1113 aa14.19□□□□□ -0.14
PFDN1-204ENST00000512707 ZCRB1Q8TBF4 217 aaKnown RBP14.19□□□□□ -0.14
PFDN1-204ENST00000512707 WDR63Q8IWG1 891 aa14.18□□□□□ -0.14
PFDN1-204ENST00000512707 A0A0G2JS52 829 aa14.17□□□□□ -0.14
PFDN1-204ENST00000512707 EXOC5O00471 708 aa14.17□□□□□ -0.14
PFDN1-204ENST00000512707 MYT1Q01538 1121 aa14.17□□□□□ -0.14
PFDN1-204ENST00000512707 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
PFDN1-204ENST00000512707 PKD1L3Q7Z443 1732 aa14.17□□□□□ -0.14
PFDN1-204ENST00000512707 DISP2A7MBM2 1401 aa14.16□□□□□ -0.14
PFDN1-204ENST00000512707 CCDC125Q86Z20 511 aa14.16□□□□□ -0.14
PFDN1-204ENST00000512707 GJD4Q96KN9 370 aaPredicted RBP14.16□□□□□ -0.14
PFDN1-204ENST00000512707 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
PFDN1-204ENST00000512707 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
PFDN1-204ENST00000512707 IL16Q14005 1332 aa14.15□□□□□ -0.14
PFDN1-204ENST00000512707 ZNF521Q96K83 1311 aa14.15□□□□□ -0.14
PFDN1-204ENST00000512707 GLI3P10071 1580 aa14.15□□□□□ -0.14
PFDN1-204ENST00000512707 E9PSI1 815 aa14.15□□□□□ -0.14
PFDN1-204ENST00000512707 DDB1Q16531 1140 aa14.15□□□□□ -0.14
PFDN1-204ENST00000512707 WNK3Q9BYP7 1800 aa14.15□□□□□ -0.14
PFDN1-204ENST00000512707 TNS2Q63HR2 1409 aa14.15□□□□□ -0.14
PFDN1-204ENST00000512707 BRWD3Q6RI45 1802 aa14.14□□□□□ -0.15
PFDN1-204ENST00000512707 PHKG2P15735 406 aa14.14□□□□□ -0.15
PFDN1-204ENST00000512707 FAM98CQ17RN3 349 aaKnown RBP14.14□□□□□ -0.15
PFDN1-204ENST00000512707 DCAF5Q96JK2 942 aa14.14□□□□□ -0.15
PFDN1-204ENST00000512707 GNAI1P63096 354 aa14.13□□□□□ -0.15
PFDN1-204ENST00000512707 TEFQ10587 303 aa14.13□□□□□ -0.15
PFDN1-204ENST00000512707 MCM10Q7L590 875 aa14.13□□□□□ -0.15
PFDN1-204ENST00000512707 DDX54Q8TDD1 881 aaKnown RBP14.13□□□□□ -0.15
PFDN1-204ENST00000512707 DLG5Q8TDM6 1919 aa14.13□□□□□ -0.15
PFDN1-204ENST00000512707 IFT57Q9NWB7 429 aa14.12□□□□□ -0.15
PFDN1-204ENST00000512707 CYP27B1O15528 508 aa14.11□□□□□ -0.15
PFDN1-204ENST00000512707 DCTN1Q14203 1278 aa14.11□□□□□ -0.15
PFDN1-204ENST00000512707 MPRIPQ6WCQ1 1025 aa14.11□□□□□ -0.15
PFDN1-204ENST00000512707 LAS1LQ9Y4W2 734 aaKnown RBP14.11□□□□□ -0.15
PFDN1-204ENST00000512707 RNMTO43148 476 aaKnown RBP14.1□□□□□ -0.15
PFDN1-204ENST00000512707 SLFN5Q08AF3 891 aa14.1□□□□□ -0.15
PFDN1-204ENST00000512707 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
PFDN1-204ENST00000512707 THUMPD2Q9BTF0 503 aaKnown RBP14.1□□□□□ -0.15
PFDN1-204ENST00000512707 LRRC37A3O60309 1634 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms