RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 LRRC59Q96AG4 307 aaKnown RBP14.62□□□□□ -0.07
PRDM16-207ENST00000512462 CFAP44Q96MT7 982 aa14.62□□□□□ -0.07
PRDM16-207ENST00000512462 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
PRDM16-207ENST00000512462 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
PRDM16-207ENST00000512462 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
PRDM16-207ENST00000512462 BLMP54132 1417 aaPredicted RBP14.61□□□□□ -0.07
PRDM16-207ENST00000512462 GNAI2P04899 355 aa14.61□□□□□ -0.07
PRDM16-207ENST00000512462 EVA1CP58658 441 aa14.61□□□□□ -0.07
PRDM16-207ENST00000512462 ZC3H13Q5T200 1668 aaKnown RBP14.61□□□□□ -0.07
PRDM16-207ENST00000512462 SRGAP3O43295 1099 aa14.61□□□□□ -0.07
PRDM16-207ENST00000512462 TRAK2O60296 914 aa14.61□□□□□ -0.07
PRDM16-207ENST00000512462 REC8O95072 547 aa14.61□□□□□ -0.07
PRDM16-207ENST00000512462 GCC1Q96CN9 775 aa14.61□□□□□ -0.07
PRDM16-207ENST00000512462 IFT57Q9NWB7 429 aa14.61□□□□□ -0.07
PRDM16-207ENST00000512462 SBNO2Q9Y2G9 1366 aa14.6□□□□□ -0.07
PRDM16-207ENST00000512462 ARHGAP31Q2M1Z3 1444 aa14.6□□□□□ -0.07
PRDM16-207ENST00000512462 VAMP4O75379 141 aa14.6□□□□□ -0.07
PRDM16-207ENST00000512462 HSP90B1P14625 803 aaKnown RBP14.6□□□□□ -0.07
PRDM16-207ENST00000512462 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
PRDM16-207ENST00000512462 RNF214Q8ND24 703 aa14.6□□□□□ -0.07
PRDM16-207ENST00000512462 ADGRB1O14514 1584 aa14.6□□□□□ -0.07
PRDM16-207ENST00000512462 KDM4AO75164 1064 aa14.59□□□□□ -0.07
PRDM16-207ENST00000512462 CHRNA2Q15822 529 aa14.59□□□□□ -0.07
PRDM16-207ENST00000512462 NEUROD6Q96NK8 337 aa14.59□□□□□ -0.07
PRDM16-207ENST00000512462 RSPH6AQ9H0K4 717 aa14.59□□□□□ -0.07
PRDM16-207ENST00000512462 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
PRDM16-207ENST00000512462 KCNA6P17658 529 aa14.59□□□□□ -0.07
PRDM16-207ENST00000512462 OTUD7AQ8TE49 926 aaPredicted RBP14.59□□□□□ -0.07
PRDM16-207ENST00000512462 CCDC27Q2M243 656 aa14.59□□□□□ -0.07
PRDM16-207ENST00000512462 GNAT3A8MTJ3 354 aa14.58□□□□□ -0.07
PRDM16-207ENST00000512462 NEXNQ0ZGT2 675 aa14.58□□□□□ -0.07
PRDM16-207ENST00000512462 MTHFSDQ2M296 383 aaKnown RBP14.58□□□□□ -0.07
PRDM16-207ENST00000512462 PHF8Q9UPP1 1060 aa14.58□□□□□ -0.07
PRDM16-207ENST00000512462 LRRFIP2Q9Y608 721 aaKnown RBP14.58□□□□□ -0.07
PRDM16-207ENST00000512462 CT47B1P0C2W7 299 aaPredicted RBP14.58□□□□□ -0.08
PRDM16-207ENST00000512462 LTKP29376 864 aa14.58□□□□□ -0.08
PRDM16-207ENST00000512462 G2E3Q7L622 706 aa14.58□□□□□ -0.08
PRDM16-207ENST00000512462 KDM2BQ8NHM5 1336 aa14.58□□□□□ -0.08
PRDM16-207ENST00000512462 BTBD11A6QL63 1104 aa14.58□□□□□ -0.08
PRDM16-207ENST00000512462 CABLES1Q8TDN4 633 aa14.58□□□□□ -0.08
PRDM16-207ENST00000512462 ZMYM3Q14202 1370 aa14.58□□□□□ -0.08
PRDM16-207ENST00000512462 DIP2BQ9P265 1576 aa14.57□□□□□ -0.08
PRDM16-207ENST00000512462 TNRQ92752 1358 aa14.57□□□□□ -0.08
PRDM16-207ENST00000512462 PTCD1O75127 700 aaKnown RBP14.57□□□□□ -0.08
PRDM16-207ENST00000512462 RBM10P98175 930 aaKnown RBP14.57□□□□□ -0.08
PRDM16-207ENST00000512462 TAF7Q15545 349 aaPredicted RBP14.57□□□□□ -0.08
PRDM16-207ENST00000512462 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
PRDM16-207ENST00000512462 VPS37CA5D8V6 355 aaPredicted RBP14.57□□□□□ -0.08
PRDM16-207ENST00000512462 G3BP1Q13283 466 aaKnown RBP eCLIP14.57□□□□□ -0.08
PRDM16-207ENST00000512462 NEXMIFQ5QGS0 1516 aa14.57□□□□□ -0.08
PRDM16-207ENST00000512462 SRCIN1Q9C0H9 1055 aa14.56□□□□□ -0.08
PRDM16-207ENST00000512462 GNAI3P08754 354 aa14.56□□□□□ -0.08
PRDM16-207ENST00000512462 MAP3K19Q56UN5 1328 aa14.56□□□□□ -0.08
PRDM16-207ENST00000512462 DDX11L8A8MPP1 907 aa14.56□□□□□ -0.08
PRDM16-207ENST00000512462 CAVIN1Q6NZI2 390 aaKnown RBP14.56□□□□□ -0.08
PRDM16-207ENST00000512462 GPATCH3Q96I76 525 aa14.56□□□□□ -0.08
PRDM16-207ENST00000512462 QRICH2Q9H0J4 1663 aa14.55□□□□□ -0.08
PRDM16-207ENST00000512462 AAMPQ13685 434 aa14.55□□□□□ -0.08
PRDM16-207ENST00000512462 ALDH1L2Q3SY69 923 aa14.55□□□□□ -0.08
PRDM16-207ENST00000512462 LRRCC1Q9C099 1032 aa14.55□□□□□ -0.08
PRDM16-207ENST00000512462 FLIIQ13045 1269 aa14.55□□□□□ -0.08
PRDM16-207ENST00000512462 CWC27Q6UX04 472 aaKnown RBP14.55□□□□□ -0.08
PRDM16-207ENST00000512462 MRPL50Q8N5N7 158 aaKnown RBP14.55□□□□□ -0.08
PRDM16-207ENST00000512462 SLC39A6Q13433 755 aa14.55□□□□□ -0.08
PRDM16-207ENST00000512462 EYA1Q99502 592 aa14.55□□□□□ -0.08
PRDM16-207ENST00000512462 PRPF40AO75400 957 aaKnown RBP14.54□□□□□ -0.08
PRDM16-207ENST00000512462 MSNP26038 577 aaKnown RBP14.54□□□□□ -0.08
PRDM16-207ENST00000512462 DNAJC2Q99543 621 aaKnown RBP14.54□□□□□ -0.08
PRDM16-207ENST00000512462 TOMM22Q9NS69 142 aa14.54□□□□□ -0.08
PRDM16-207ENST00000512462 PLEKHO1Q53GL0 409 aaPredicted RBP14.54□□□□□ -0.08
PRDM16-207ENST00000512462 DDX17Q92841 729 aaKnown RBP14.54□□□□□ -0.08
PRDM16-207ENST00000512462 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
PRDM16-207ENST00000512462 NINLQ9Y2I6 1382 aa14.54□□□□□ -0.08
PRDM16-207ENST00000512462 MCM4P33991 863 aa14.54□□□□□ -0.08
PRDM16-207ENST00000512462 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
PRDM16-207ENST00000512462 ZBTB40Q9NUA8 1239 aa14.54□□□□□ -0.08
PRDM16-207ENST00000512462 ZNF521Q96K83 1311 aa14.53□□□□□ -0.08
PRDM16-207ENST00000512462 CLASRPQ8N2M8 674 aaKnown RBP14.53□□□□□ -0.08
PRDM16-207ENST00000512462 PPFIA3O75145 1194 aa14.53□□□□□ -0.08
PRDM16-207ENST00000512462 TSPOAP1O95153 1857 aa14.53□□□□□ -0.08
PRDM16-207ENST00000512462 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
PRDM16-207ENST00000512462 ABCC11Q96J66 1382 aa14.53□□□□□ -0.08
PRDM16-207ENST00000512462 FBXW7Q969H0 707 aa14.53□□□□□ -0.08
PRDM16-207ENST00000512462 NSD2O96028 1365 aa14.52□□□□□ -0.08
PRDM16-207ENST00000512462 PI4KAP2A4QPH2 592 aa14.52□□□□□ -0.08
PRDM16-207ENST00000512462 IL13P35225 146 aa14.52□□□□□ -0.08
PRDM16-207ENST00000512462 PI4KAP1Q8N8J0 262 aa14.52□□□□□ -0.08
PRDM16-207ENST00000512462 DNAJC5Q9H3Z4 198 aa14.52□□□□□ -0.08
PRDM16-207ENST00000512462 METP08581 1390 aa14.52□□□□□ -0.08
PRDM16-207ENST00000512462 PDIA4P13667 645 aaKnown RBP14.52□□□□□ -0.09
PRDM16-207ENST00000512462 SSFA2P28290 1259 aa14.52□□□□□ -0.09
PRDM16-207ENST00000512462 CCT4P50991 539 aaKnown RBP14.52□□□□□ -0.09
PRDM16-207ENST00000512462 ZRSR1Q15695 479 aaKnown RBP14.52□□□□□ -0.09
PRDM16-207ENST00000512462 K7ELQ4 463 aaPredicted RBP14.51□□□□□ -0.09
PRDM16-207ENST00000512462 DDX58O95786 925 aaKnown RBP14.51□□□□□ -0.09
PRDM16-207ENST00000512462 STK3Q13188 491 aa14.51□□□□□ -0.09
PRDM16-207ENST00000512462 TOM1L2Q6ZVM7 507 aa14.51□□□□□ -0.09
PRDM16-207ENST00000512462 FSD1Q9BTV5 496 aa14.51□□□□□ -0.09
PRDM16-207ENST00000512462 PHAXQ9H814 394 aaKnown RBP14.51□□□□□ -0.09
PRDM16-207ENST00000512462 DRC7Q8IY82 874 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms