RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
CLDND1-224ENST00000511667 NSD3Q9BZ95 1437 aa18.75■□□□□ 0.59
CLDND1-224ENST00000511667 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
CLDND1-224ENST00000511667 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
CLDND1-224ENST00000511667 HSPA6P17066 643 aa18.74■□□□□ 0.59
CLDND1-224ENST00000511667 ANKRD26Q9UPS8 1709 aa18.74■□□□□ 0.59
CLDND1-224ENST00000511667 NLRP2Q9NX02 1062 aa18.72■□□□□ 0.59
CLDND1-224ENST00000511667 GOLGB1Q14789 3259 aaKnown RBP18.71■□□□□ 0.59
CLDND1-224ENST00000511667 EXOC5O00471 708 aa18.71■□□□□ 0.59
CLDND1-224ENST00000511667 IL2RBP14784 551 aa18.71■□□□□ 0.59
CLDND1-224ENST00000511667 KLHL34Q8N239 644 aa18.71■□□□□ 0.59
CLDND1-224ENST00000511667 INSRP06213 1382 aa18.7■□□□□ 0.58
CLDND1-224ENST00000511667 RRS1Q15050 365 aaKnown RBP18.7■□□□□ 0.58
CLDND1-224ENST00000511667 RGPD2P0DJD1 1756 aa18.7■□□□□ 0.58
CLDND1-224ENST00000511667 NCAPD2Q15021 1401 aa18.69■□□□□ 0.58
CLDND1-224ENST00000511667 GRIN3BO60391 1043 aa18.68■□□□□ 0.58
CLDND1-224ENST00000511667 AMPHP49418 695 aa18.68■□□□□ 0.58
CLDND1-224ENST00000511667 CGNL1Q0VF96 1302 aa18.68■□□□□ 0.58
CLDND1-224ENST00000511667 FLT4P35916 1363 aa18.68■□□□□ 0.58
CLDND1-224ENST00000511667 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
CLDND1-224ENST00000511667 POLD1P28340 1107 aa18.67■□□□□ 0.58
CLDND1-224ENST00000511667 GPBP1L1Q9HC44 474 aaPredicted RBP18.67■□□□□ 0.58
CLDND1-224ENST00000511667 ATP10DQ9P241 1426 aa18.66■□□□□ 0.58
CLDND1-224ENST00000511667 MEGF6O75095 1541 aa18.65■□□□□ 0.58
CLDND1-224ENST00000511667 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
CLDND1-224ENST00000511667 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
CLDND1-224ENST00000511667 SLC16A10Q8TF71 515 aa18.65■□□□□ 0.58
CLDND1-224ENST00000511667 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
CLDND1-224ENST00000511667 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
CLDND1-224ENST00000511667 PANK3Q9H999 370 aa18.63■□□□□ 0.57
CLDND1-224ENST00000511667 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
CLDND1-224ENST00000511667 WASHC2AQ641Q2 1341 aa18.63■□□□□ 0.57
CLDND1-224ENST00000511667 MAP2P11137 1827 aaKnown RBP18.63■□□□□ 0.57
CLDND1-224ENST00000511667 LTV1Q96GA3 475 aaPredicted RBP18.62■□□□□ 0.57
CLDND1-224ENST00000511667 NSD2O96028 1365 aa18.62■□□□□ 0.57
CLDND1-224ENST00000511667 SMG6Q86US8 1419 aaKnown RBP18.62■□□□□ 0.57
CLDND1-224ENST00000511667 NLGN2Q8NFZ4 835 aa18.61■□□□□ 0.57
CLDND1-224ENST00000511667 POLKQ9UBT6 870 aa18.61■□□□□ 0.57
CLDND1-224ENST00000511667 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
CLDND1-224ENST00000511667 YBX3P16989 372 aaKnown RBP eCLIP18.6■□□□□ 0.57
CLDND1-224ENST00000511667 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
CLDND1-224ENST00000511667 BTAF1O14981 1849 aa18.58■□□□□ 0.57
CLDND1-224ENST00000511667 COL24A1Q17RW2 1714 aa18.57■□□□□ 0.56
CLDND1-224ENST00000511667 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
CLDND1-224ENST00000511667 PLEKHG2Q9H7P9 1386 aa18.56■□□□□ 0.56
CLDND1-224ENST00000511667 PER1O15534 1290 aaPredicted RBP18.56■□□□□ 0.56
CLDND1-224ENST00000511667 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
CLDND1-224ENST00000511667 PKD1L3Q7Z443 1732 aa18.56■□□□□ 0.56
CLDND1-224ENST00000511667 APLP1P51693 650 aa18.55■□□□□ 0.56
CLDND1-224ENST00000511667 QSER1Q2KHR3 1735 aa18.54■□□□□ 0.56
CLDND1-224ENST00000511667 USHBP1Q8N6Y0 703 aa18.54■□□□□ 0.56
CLDND1-224ENST00000511667 ZNF526Q8TF50 670 aaPredicted RBP18.54■□□□□ 0.56
CLDND1-224ENST00000511667 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
CLDND1-224ENST00000511667 ADCY9O60503 1353 aa18.54■□□□□ 0.56
CLDND1-224ENST00000511667 ACSBG1Q96GR2 724 aa18.53■□□□□ 0.56
CLDND1-224ENST00000511667 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.56
CLDND1-224ENST00000511667 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.56
CLDND1-224ENST00000511667 AKT1S1Q96B36 256 aa18.52■□□□□ 0.56
CLDND1-224ENST00000511667 EYA1Q99502 592 aa18.52■□□□□ 0.56
CLDND1-224ENST00000511667 LRRC4BQ9NT99 713 aa18.52■□□□□ 0.56
CLDND1-224ENST00000511667 PNPLA7Q6ZV29 1317 aa18.51■□□□□ 0.55
CLDND1-224ENST00000511667 RAPGEF4Q8WZA2 1011 aa18.51■□□□□ 0.55
CLDND1-224ENST00000511667 LY75O60449 1722 aa18.5■□□□□ 0.55
CLDND1-224ENST00000511667 CYP27B1O15528 508 aa18.5■□□□□ 0.55
CLDND1-224ENST00000511667 CAPN15O75808 1086 aa18.5■□□□□ 0.55
CLDND1-224ENST00000511667 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
CLDND1-224ENST00000511667 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
CLDND1-224ENST00000511667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.5■□□□□ 0.55
CLDND1-224ENST00000511667 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
CLDND1-224ENST00000511667 NKX1-1Q15270 411 aaPredicted RBP18.49■□□□□ 0.55
CLDND1-224ENST00000511667 TFCP2L1Q9NZI6 479 aa18.49■□□□□ 0.55
CLDND1-224ENST00000511667 NPC1L1Q9UHC9 1359 aa18.49■□□□□ 0.55
CLDND1-224ENST00000511667 KAT6BQ8WYB5 2073 aa18.49■□□□□ 0.55
CLDND1-224ENST00000511667 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
CLDND1-224ENST00000511667 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
CLDND1-224ENST00000511667 SLC27A3Q5K4L6 730 aa18.48■□□□□ 0.55
CLDND1-224ENST00000511667 KNSTRNQ9Y448 316 aa18.48■□□□□ 0.55
CLDND1-224ENST00000511667 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
CLDND1-224ENST00000511667 PPM1GO15355 546 aaPredicted RBP18.47■□□□□ 0.55
CLDND1-224ENST00000511667 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
CLDND1-224ENST00000511667 DNAJC5GQ8N7S2 189 aa18.47■□□□□ 0.55
CLDND1-224ENST00000511667 COL13A1Q5TAT6 717 aaPredicted RBP18.46■□□□□ 0.55
CLDND1-224ENST00000511667 KIF3CO14782 793 aa18.45■□□□□ 0.54
CLDND1-224ENST00000511667 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
CLDND1-224ENST00000511667 PRELPP51888 382 aa18.45■□□□□ 0.54
CLDND1-224ENST00000511667 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
CLDND1-224ENST00000511667 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
CLDND1-224ENST00000511667 KDRP35968 1356 aa18.43■□□□□ 0.54
CLDND1-224ENST00000511667 ITGB4P16144 1822 aa18.42■□□□□ 0.54
CLDND1-224ENST00000511667 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
CLDND1-224ENST00000511667 CD2APQ9Y5K6 639 aa18.42■□□□□ 0.54
CLDND1-224ENST00000511667 IL13P35225 146 aa18.41■□□□□ 0.54
CLDND1-224ENST00000511667 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
CLDND1-224ENST00000511667 MSH5O43196 834 aa18.39■□□□□ 0.53
CLDND1-224ENST00000511667 PHKG2P15735 406 aa18.39■□□□□ 0.53
CLDND1-224ENST00000511667 TOMM70O94826 608 aa18.38■□□□□ 0.53
CLDND1-224ENST00000511667 SYTL4Q96C24 671 aaPredicted RBP18.37■□□□□ 0.53
CLDND1-224ENST00000511667 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
CLDND1-224ENST00000511667 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
CLDND1-224ENST00000511667 TAF1LQ8IZX4 1826 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms